RNA–Protein interactions for RNA: ENST00000530520.5

ME3-209, Transcript of malic enzyme 3, humanhuman

TSL 5

Gene ME3, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-209ENST00000530520 MFAP1P55081 439 aaKnown RBP29.74■■■□□ 2.35
ME3-209ENST00000530520 LCORLQ8N3X6 602 aa29.74■■■□□ 2.35
ME3-209ENST00000530520 RIOK1Q9BRS2 568 aaKnown RBP29.74■■■□□ 2.35
ME3-209ENST00000530520 MYOZ2Q9NPC6 264 aa29.74■■■□□ 2.35
ME3-209ENST00000530520 PCDHAC2Q9Y5I4 1007 aa29.74■■■□□ 2.35
ME3-209ENST00000530520 ECM29Q5VYK3 1845 aa29.73■■■□□ 2.35
ME3-209ENST00000530520 CERS3Q8IU89 383 aa29.73■■■□□ 2.35
ME3-209ENST00000530520 PLCG2P16885 1265 aa29.72■■■□□ 2.35
ME3-209ENST00000530520 PPP4CP60510 307 aa29.72■■■□□ 2.35
ME3-209ENST00000530520 RBM26Q5T8P6 1007 aaKnown RBP29.72■■■□□ 2.35
ME3-209ENST00000530520 APOBEC3HQ6NTF7 200 aaKnown RBP29.72■■■□□ 2.35
ME3-209ENST00000530520 L3MBTL3Q96JM7 780 aaPredicted RBP29.72■■■□□ 2.35
ME3-209ENST00000530520 EPS15P42566 896 aa29.71■■■□□ 2.35
ME3-209ENST00000530520 STRBPQ96SI9 672 aaKnown RBP29.71■■■□□ 2.35
ME3-209ENST00000530520 CDK5RAP2Q96SN8 1893 aa29.71■■■□□ 2.35
ME3-209ENST00000530520 SPDYE2BA6NHP3 402 aa29.7■■■□□ 2.35
ME3-209ENST00000530520 SPDYE6P0CI01 402 aa29.7■■■□□ 2.35
ME3-209ENST00000530520 KIAA1211Q6ZU35 1233 aa29.7■■■□□ 2.35
ME3-209ENST00000530520 SAMD7Q7Z3H4 446 aa29.7■■■□□ 2.35
ME3-209ENST00000530520 MTMR14Q8NCE2 650 aa29.7■■■□□ 2.35
ME3-209ENST00000530520 WDR90Q96KV7 1748 aa29.7■■■□□ 2.34
ME3-209ENST00000530520 KIF4BQ2VIQ3 1234 aa29.69■■■□□ 2.34
ME3-209ENST00000530520 TBC1D10BQ4KMP7 808 aaPredicted RBP29.69■■■□□ 2.34
ME3-209ENST00000530520 SH3RF3Q8TEJ3 882 aaPredicted RBP29.69■■■□□ 2.34
ME3-209ENST00000530520 PRMT6Q96LA8 375 aaPredicted RBP29.69■■■□□ 2.34
ME3-209ENST00000530520 CRNKL1Q9BZJ0 848 aaKnown RBP29.69■■■□□ 2.34
ME3-209ENST00000530520 ANO2Q9NQ90 1003 aa29.69■■■□□ 2.34
ME3-209ENST00000530520 SCN4AP35499 1836 aa29.69■■■□□ 2.34
ME3-209ENST00000530520 USP40Q9NVE5 1235 aa29.69■■■□□ 2.34
ME3-209ENST00000530520 EIF5BO60841 1220 aaKnown RBP29.68■■■□□ 2.34
ME3-209ENST00000530520 REC8O95072 547 aa29.68■■■□□ 2.34
ME3-209ENST00000530520 EGFRP00533 1210 aa29.68■■■□□ 2.34
ME3-209ENST00000530520 GNAT2P19087 354 aa29.68■■■□□ 2.34
ME3-209ENST00000530520 RHBDL3P58872 404 aa29.68■■■□□ 2.34
ME3-209ENST00000530520 CDC42EP5Q6NZY7 148 aa29.68■■■□□ 2.34
ME3-209ENST00000530520 TEX11Q8IYF3 940 aa29.68■■■□□ 2.34
ME3-209ENST00000530520 SLC4A4Q9Y6R1 1079 aa29.68■■■□□ 2.34
ME3-209ENST00000530520 FOCADQ5VW36 1801 aa29.67■■■□□ 2.34
ME3-209ENST00000530520 MYO1BO43795 1136 aa29.67■■■□□ 2.34
ME3-209ENST00000530520 TDRD3Q9H7E2 651 aaKnown RBP29.67■■■□□ 2.34
ME3-209ENST00000530520 HACL1Q9UJ83 578 aa29.67■■■□□ 2.34
ME3-209ENST00000530520 WNT10BO00744 389 aa29.66■■■□□ 2.34
ME3-209ENST00000530520 VPS53Q5VIR6 699 aa29.66■■■□□ 2.34
ME3-209ENST00000530520 ZBED3Q96IU2 234 aaPredicted RBP29.66■■■□□ 2.34
ME3-209ENST00000530520 BACH2Q9BYV9 841 aa29.66■■■□□ 2.34
ME3-209ENST00000530520 ADARB2Q9NS39 739 aaKnown RBP29.66■■■□□ 2.34
ME3-209ENST00000530520 PRKAB2O43741 272 aa29.65■■■□□ 2.34
ME3-209ENST00000530520 APPP05067 770 aa29.65■■■□□ 2.34
ME3-209ENST00000530520 NBPF9Q3BBW0 867 aa29.65■■■□□ 2.34
ME3-209ENST00000530520 SDR42E1Q8WUS8 393 aa29.65■■■□□ 2.34
ME3-209ENST00000530520 IQCA1LA6NCM1 817 aa29.64■■■□□ 2.34
ME3-209ENST00000530520 HSPD1P10809 573 aaKnown RBP29.64■■■□□ 2.34
ME3-209ENST00000530520 USP5P45974 858 aa29.64■■■□□ 2.34
ME3-209ENST00000530520 TRPM4Q8TD43 1214 aa29.64■■■□□ 2.34
ME3-209ENST00000530520 TMOD2Q9NZR1 351 aa29.64■■■□□ 2.34
ME3-209ENST00000530520 NAV1Q8NEY1 1877 aa29.64■■■□□ 2.34
ME3-209ENST00000530520 SEC24BO95487 1268 aa29.64■■■□□ 2.33
ME3-209ENST00000530520 BAZ2AQ9UIF9 1905 aaKnown RBP29.63■■■□□ 2.33
ME3-209ENST00000530520 CLRN2A0PK11 232 aa29.63■■■□□ 2.33
ME3-209ENST00000530520 PATL2C9JE40 543 aaKnown RBP29.63■■■□□ 2.33
ME3-209ENST00000530520 PTH1RQ03431 593 aa29.63■■■□□ 2.33
ME3-209ENST00000530520 TGFBRAP1Q8WUH2 860 aa29.63■■■□□ 2.33
ME3-209ENST00000530520 DSCC1Q9BVC3 393 aa29.63■■■□□ 2.33
ME3-209ENST00000530520 LSG1Q9H089 658 aaKnown RBP29.63■■■□□ 2.33
ME3-209ENST00000530520 CACNB3P54284 484 aa29.62■■■□□ 2.33
ME3-209ENST00000530520 DDRGK1Q96HY6 314 aa29.62■■■□□ 2.33
ME3-209ENST00000530520 ZNF70Q9UC06 446 aaPredicted RBP29.62■■■□□ 2.33
ME3-209ENST00000530520 RPAP1Q9BWH6 1393 aaPredicted RBP29.61■■■□□ 2.33
ME3-209ENST00000530520 GSG1L2A8MUP6 293 aa29.61■■■□□ 2.33
ME3-209ENST00000530520 EPHX2P34913 555 aa29.61■■■□□ 2.33
ME3-209ENST00000530520 SPDYE2Q495Y8 402 aa29.61■■■□□ 2.33
ME3-209ENST00000530520 NACAP1Q9BZK3 213 aa29.61■■■□□ 2.33
ME3-209ENST00000530520 FOXP2O15409 715 aa29.6■■■□□ 2.33
ME3-209ENST00000530520 WDHD1O75717 1129 aaPredicted RBP29.6■■■□□ 2.33
ME3-209ENST00000530520 PICALMQ13492 652 aa29.6■■■□□ 2.33
ME3-209ENST00000530520 MAPKAPK5Q8IW41 473 aa29.6■■■□□ 2.33
ME3-209ENST00000530520 VEZTQ9HBM0 779 aa29.6■■■□□ 2.33
ME3-209ENST00000530520 ATP8A2Q9NTI2 1148 aa29.6■■■□□ 2.33
ME3-209ENST00000530520 MYH1P12882 1939 aa29.59■■■□□ 2.33
ME3-209ENST00000530520 TDO2P48775 406 aa29.59■■■□□ 2.33
ME3-209ENST00000530520 IFNL3Q8IZI9 196 aa29.59■■■□□ 2.33
ME3-209ENST00000530520 ZNF526Q8TF50 670 aaPredicted RBP29.59■■■□□ 2.33
ME3-209ENST00000530520 NAPBQ9H115 298 aa29.59■■■□□ 2.33
ME3-209ENST00000530520 EPB41L4AQ9HCS5 686 aaPredicted RBP29.59■■■□□ 2.33
ME3-209ENST00000530520 DCP1AQ9NPI6 582 aaPredicted RBP29.59■■■□□ 2.33
ME3-209ENST00000530520 FLT1P17948 1338 aa29.59■■■□□ 2.33
ME3-209ENST00000530520 POTECB2RU33 542 aa29.58■■■□□ 2.33
ME3-209ENST00000530520 HIRAP54198 1017 aaPredicted RBP29.58■■■□□ 2.33
ME3-209ENST00000530520 NFIAQ12857 509 aa29.58■■■□□ 2.33
ME3-209ENST00000530520 MAP4K1Q92918 833 aa29.58■■■□□ 2.33
ME3-209ENST00000530520 IDI2Q9BXS1 227 aa29.58■■■□□ 2.33
ME3-209ENST00000530520 TAF1DQ9H5J8 278 aaPredicted RBP29.58■■■□□ 2.33
ME3-209ENST00000530520 USP50Q70EL3 339 aaPredicted RBP29.57■■■□□ 2.32
ME3-209ENST00000530520 DDX4Q9NQI0 724 aaKnown RBP29.57■■■□□ 2.32
ME3-209ENST00000530520 ASTN2O75129 1339 aaPredicted RBP29.57■■■□□ 2.32
ME3-209ENST00000530520 DDX60LQ5H9U9 1706 aaKnown RBP29.56■■■□□ 2.32
ME3-209ENST00000530520 TCP10L2B9ZVM9 353 aa29.56■■■□□ 2.32
ME3-209ENST00000530520 GIMAP6Q6P9H5 292 aa29.56■■■□□ 2.32
ME3-209ENST00000530520 UPF2Q9HAU5 1272 aaKnown RBP29.56■■■□□ 2.32
ME3-209ENST00000530520 RRAGCQ9HB90 399 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms