RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 PDZD3Q86UT5 571 aa9.51□□□□□ -0.89
VPS26B-205ENST00000530402 KIAA0825Q8IV33 1275 aa9.51□□□□□ -0.89
VPS26B-205ENST00000530402 GOLM1Q8NBJ4 401 aa9.51□□□□□ -0.89
VPS26B-205ENST00000530402 NRSN2Q9GZP1 204 aa9.51□□□□□ -0.89
VPS26B-205ENST00000530402 CAPN10Q9HC96 672 aa9.51□□□□□ -0.89
VPS26B-205ENST00000530402 RAD18Q9NS91 495 aa9.51□□□□□ -0.89
VPS26B-205ENST00000530402 TM4SF5O14894 197 aa9.5□□□□□ -0.89
VPS26B-205ENST00000530402 SPATA31C1P0DKV0 1188 aa9.5□□□□□ -0.89
VPS26B-205ENST00000530402 ZNF252P-AS1Q0IIN9 211 aa9.5□□□□□ -0.89
VPS26B-205ENST00000530402 GNL2Q13823 731 aaKnown RBP9.5□□□□□ -0.89
VPS26B-205ENST00000530402 SEPT6Q14141 434 aa9.5□□□□□ -0.89
VPS26B-205ENST00000530402 TRIM42Q8IWZ5 723 aa9.5□□□□□ -0.89
VPS26B-205ENST00000530402 ZNF296Q8WUU4 475 aaPredicted RBP9.5□□□□□ -0.89
VPS26B-205ENST00000530402 RHOVQ96L33 236 aa9.5□□□□□ -0.89
VPS26B-205ENST00000530402 RUSC1Q9BVN2 902 aa9.5□□□□□ -0.89
VPS26B-205ENST00000530402 MRPL18Q9H0U6 180 aaKnown RBP9.5□□□□□ -0.89
VPS26B-205ENST00000530402 CCDC86Q9H6F5 360 aaKnown RBP9.5□□□□□ -0.89
VPS26B-205ENST00000530402 ADAMTS1Q9UHI8 967 aa9.5□□□□□ -0.89
VPS26B-205ENST00000530402 USP21Q9UK80 565 aa9.5□□□□□ -0.89
VPS26B-205ENST00000530402 SUPT16HQ9Y5B9 1047 aaKnown RBP9.5□□□□□ -0.89
VPS26B-205ENST00000530402 TRIM37O94972 964 aa9.49□□□□□ -0.89
VPS26B-205ENST00000530402 APBA3O96018 575 aa9.49□□□□□ -0.89
VPS26B-205ENST00000530402 CTSBP07858 339 aa9.49□□□□□ -0.89
VPS26B-205ENST00000530402 LIG1P18858 919 aa9.49□□□□□ -0.89
VPS26B-205ENST00000530402 FBXL19Q6PCT2 694 aa9.49□□□□□ -0.89
VPS26B-205ENST00000530402 SHISA2Q6UWI4 295 aa9.49□□□□□ -0.89
VPS26B-205ENST00000530402 MPRIPQ6WCQ1 1025 aa9.49□□□□□ -0.89
VPS26B-205ENST00000530402 KRT82Q9NSB4 513 aa9.49□□□□□ -0.89
VPS26B-205ENST00000530402 WISP1O95388 367 aa9.48□□□□□ -0.89
VPS26B-205ENST00000530402 TNNI2P48788 182 aa9.48□□□□□ -0.89
VPS26B-205ENST00000530402 EXOSC6Q5RKV6 272 aaKnown RBP9.48□□□□□ -0.89
VPS26B-205ENST00000530402 GPBAR1Q8TDU6 330 aa9.48□□□□□ -0.89
VPS26B-205ENST00000530402 PCDHA4Q9UN74 947 aa9.48□□□□□ -0.89
VPS26B-205ENST00000530402 BPNT1O95861 308 aa9.47□□□□□ -0.89
VPS26B-205ENST00000530402 PAK2Q13177 524 aa9.47□□□□□ -0.89
VPS26B-205ENST00000530402 NAALADL2Q58DX5 795 aa9.47□□□□□ -0.89
VPS26B-205ENST00000530402 NUTM2GQ5VZR2 741 aa9.47□□□□□ -0.89
VPS26B-205ENST00000530402 SCARA3Q6AZY7 606 aa9.47□□□□□ -0.89
VPS26B-205ENST00000530402 BNC2Q6ZN30 1099 aaPredicted RBP9.47□□□□□ -0.89
VPS26B-205ENST00000530402 NACC1Q96RE7 527 aa9.47□□□□□ -0.89
VPS26B-205ENST00000530402 DLGAP3O95886 979 aa9.46□□□□□ -0.9
VPS26B-205ENST00000530402 SLFN14P0C7P3 912 aa9.46□□□□□ -0.9
VPS26B-205ENST00000530402 COL8A1P27658 744 aa9.46□□□□□ -0.9
VPS26B-205ENST00000530402 CCDC84Q86UT8 332 aaPredicted RBP9.46□□□□□ -0.9
VPS26B-205ENST00000530402 RNF208Q9H0X6 261 aa9.46□□□□□ -0.9
VPS26B-205ENST00000530402 F13A1P00488 732 aa9.45□□□□□ -0.9
VPS26B-205ENST00000530402 AKAP4Q5JQC9 854 aa9.45□□□□□ -0.9
VPS26B-205ENST00000530402 KIAA1211Q6ZU35 1233 aa9.45□□□□□ -0.9
VPS26B-205ENST00000530402 GATAD2BQ8WXI9 593 aa9.45□□□□□ -0.9
VPS26B-205ENST00000530402 GAL3ST3Q96A11 431 aa9.45□□□□□ -0.9
VPS26B-205ENST00000530402 GPRASP2Q96D09 838 aa9.45□□□□□ -0.9
VPS26B-205ENST00000530402 WDR89Q96FK6 387 aaPredicted RBP9.45□□□□□ -0.9
VPS26B-205ENST00000530402 C8orf37Q96NL8 207 aa9.45□□□□□ -0.9
VPS26B-205ENST00000530402 CYP4F12Q9HCS2 524 aa9.45□□□□□ -0.9
VPS26B-205ENST00000530402 C9orf172C9J069 976 aa9.44□□□□□ -0.9
VPS26B-205ENST00000530402 RNF225M0QZC1 329 aaPredicted RBP9.44□□□□□ -0.9
VPS26B-205ENST00000530402 TLR3O15455 904 aaKnown RBP9.44□□□□□ -0.9
VPS26B-205ENST00000530402 ZNF862O60290 1169 aa9.44□□□□□ -0.9
VPS26B-205ENST00000530402 AOC2O75106 756 aa9.44□□□□□ -0.9
VPS26B-205ENST00000530402 SELPP16109 830 aa9.44□□□□□ -0.9
VPS26B-205ENST00000530402 GARTP22102 1010 aa9.44□□□□□ -0.9
VPS26B-205ENST00000530402 PTPN11Q06124 597 aaPredicted RBP9.44□□□□□ -0.9
VPS26B-205ENST00000530402 APOBRQ0VD83 1088 aa9.44□□□□□ -0.9
VPS26B-205ENST00000530402 FDX2Q6P4F2 183 aa9.44□□□□□ -0.9
VPS26B-205ENST00000530402 FAM196AQ6ZSG2 479 aa9.44□□□□□ -0.9
VPS26B-205ENST00000530402 VPS37DQ86XT2 251 aa9.44□□□□□ -0.9
VPS26B-205ENST00000530402 AGGF1Q8N302 714 aaeCLIP9.44□□□□□ -0.9
VPS26B-205ENST00000530402 UBP1Q9NZI7 540 aa9.44□□□□□ -0.9
VPS26B-205ENST00000530402 GREM1O60565 184 aa9.43□□□□□ -0.9
VPS26B-205ENST00000530402 NRG1Q02297 640 aaPredicted RBP9.43□□□□□ -0.9
VPS26B-205ENST00000530402 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.43□□□□□ -0.9
VPS26B-205ENST00000530402 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.43□□□□□ -0.9
VPS26B-205ENST00000530402 ALYREFQ86V81 257 aaKnown RBP9.43□□□□□ -0.9
VPS26B-205ENST00000530402 C12orf50Q8NA57 414 aaPredicted RBP9.43□□□□□ -0.9
VPS26B-205ENST00000530402 ELMO3Q96BJ8 720 aa9.43□□□□□ -0.9
VPS26B-205ENST00000530402 LENG1Q96BZ8 264 aaPredicted RBP9.43□□□□□ -0.9
VPS26B-205ENST00000530402 EAF1Q96JC9 268 aaPredicted RBP9.43□□□□□ -0.9
VPS26B-205ENST00000530402 WDR18Q9BV38 432 aa9.43□□□□□ -0.9
VPS26B-205ENST00000530402 NT5C1AQ9BXI3 368 aa9.43□□□□□ -0.9
VPS26B-205ENST00000530402 TMPRSS13Q9BYE2 586 aa9.43□□□□□ -0.9
VPS26B-205ENST00000530402 AKTIPQ9H8T0 292 aa9.43□□□□□ -0.9
VPS26B-205ENST00000530402 PICK1Q9NRD5 415 aa9.43□□□□□ -0.9
VPS26B-205ENST00000530402 STK17AQ9UEE5 414 aa9.43□□□□□ -0.9
VPS26B-205ENST00000530402 MEGF11A6BM72 1044 aa9.42□□□□□ -0.9
VPS26B-205ENST00000530402 F8W735 103 aaPredicted RBP9.42□□□□□ -0.9
VPS26B-205ENST00000530402 ALX3O95076 343 aa9.42□□□□□ -0.9
VPS26B-205ENST00000530402 CWF19L2Q2TBE0 894 aaKnown RBP9.42□□□□□ -0.9
VPS26B-205ENST00000530402 KIF4BQ2VIQ3 1234 aa9.42□□□□□ -0.9
VPS26B-205ENST00000530402 HDXQ7Z353 690 aa9.42□□□□□ -0.9
VPS26B-205ENST00000530402 TMEM130Q8N3G9 435 aa9.42□□□□□ -0.9
VPS26B-205ENST00000530402 NKD1Q969G9 470 aa9.42□□□□□ -0.9
VPS26B-205ENST00000530402 KCNQ5Q9NR82 932 aa9.42□□□□□ -0.9
VPS26B-205ENST00000530402 AP4E1Q9UPM8 1137 aa9.42□□□□□ -0.9
VPS26B-205ENST00000530402 ROBO2Q9HCK4 1378 aa9.41□□□□□ -0.9
VPS26B-205ENST00000530402 DCDC2CA8MYV0 355 aa9.41□□□□□ -0.9
VPS26B-205ENST00000530402 GLB1P16278 677 aa9.41□□□□□ -0.9
VPS26B-205ENST00000530402 RPL6Q02878 288 aaKnown RBP9.41□□□□□ -0.9
VPS26B-205ENST00000530402 SEZ6Q53EL9 994 aa9.41□□□□□ -0.9
VPS26B-205ENST00000530402 WIPI1Q5MNZ9 446 aaPredicted RBP9.41□□□□□ -0.9
VPS26B-205ENST00000530402 FBXO27Q8NI29 283 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms