RNA–Protein interactions for RNA: ENST00000530219.1

EIF3F-204, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 2,110 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-204ENST00000530219 TEX35Q5T0J7 233 aa12.57□□□□□ -0.4
EIF3F-204ENST00000530219 FMR1NBQ8N0W7 255 aaPredicted RBP12.57□□□□□ -0.4
EIF3F-204ENST00000530219 AOPEPQ8N6M6 819 aa12.57□□□□□ -0.4
EIF3F-204ENST00000530219 DDX11Q96FC9 970 aa12.57□□□□□ -0.4
EIF3F-204ENST00000530219 TIGD1Q96MW7 591 aa12.57□□□□□ -0.4
EIF3F-204ENST00000530219 TSPYL1Q9H0U9 437 aa12.57□□□□□ -0.4
EIF3F-204ENST00000530219 POLR3EQ9NVU0 708 aa12.57□□□□□ -0.4
EIF3F-204ENST00000530219 ASAP1Q9ULH1 1129 aa12.57□□□□□ -0.4
EIF3F-204ENST00000530219 ZNF831Q5JPB2 1677 aa12.56□□□□□ -0.4
EIF3F-204ENST00000530219 VEGFAP15692 232 aaPredicted RBP12.56□□□□□ -0.4
EIF3F-204ENST00000530219 EVCP57679 992 aa12.56□□□□□ -0.4
EIF3F-204ENST00000530219 EXOSC10Q01780 885 aaKnown RBP12.56□□□□□ -0.4
EIF3F-204ENST00000530219 USP28Q96RU2 1077 aa12.56□□□□□ -0.4
EIF3F-204ENST00000530219 TLR7Q9NYK1 1049 aaKnown RBP12.56□□□□□ -0.4
EIF3F-204ENST00000530219 TMOD3Q9NYL9 352 aa12.56□□□□□ -0.4
EIF3F-204ENST00000530219 USP16Q9Y5T5 823 aa12.56□□□□□ -0.4
EIF3F-204ENST00000530219 ZNF609O15014 1411 aa12.56□□□□□ -0.4
EIF3F-204ENST00000530219 H2AFXP16104 143 aaPredicted RBP12.56□□□□□ -0.4
EIF3F-204ENST00000530219 ARHGEF1Q92888 912 aaKnown RBP12.56□□□□□ -0.4
EIF3F-204ENST00000530219 DBNLQ9UJU6 430 aaKnown RBP12.56□□□□□ -0.4
EIF3F-204ENST00000530219 KDM6AO15550 1401 aaPredicted RBP12.56□□□□□ -0.4
EIF3F-204ENST00000530219 ZSCAN12O43309 604 aa12.55□□□□□ -0.4
EIF3F-204ENST00000530219 NLRP12P59046 1061 aa12.55□□□□□ -0.4
EIF3F-204ENST00000530219 STK38Q15208 465 aa12.55□□□□□ -0.4
EIF3F-204ENST00000530219 RC3H1Q5TC82 1133 aaKnown RBP12.55□□□□□ -0.4
EIF3F-204ENST00000530219 FBXO38Q6PIJ6 1188 aa12.55□□□□□ -0.4
EIF3F-204ENST00000530219 SIL1Q9H173 461 aa12.55□□□□□ -0.4
EIF3F-204ENST00000530219 GOLPH3LQ9H4A5 285 aa12.55□□□□□ -0.4
EIF3F-204ENST00000530219 GLTPD2A6NH11 291 aa12.55□□□□□ -0.4
EIF3F-204ENST00000530219 IGKV5-2P06315 115 aa12.55□□□□□ -0.4
EIF3F-204ENST00000530219 SLC3A2P08195 630 aaKnown RBP12.55□□□□□ -0.4
EIF3F-204ENST00000530219 ELF2Q15723 593 aa12.55□□□□□ -0.4
EIF3F-204ENST00000530219 PROSER3Q2NL68 480 aa12.55□□□□□ -0.4
EIF3F-204ENST00000530219 CCDC93Q567U6 631 aa12.55□□□□□ -0.4
EIF3F-204ENST00000530219 CARMIL3Q8ND23 1372 aa12.55□□□□□ -0.4
EIF3F-204ENST00000530219 WDR19Q8NEZ3 1342 aa12.55□□□□□ -0.4
EIF3F-204ENST00000530219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.55□□□□□ -0.4
EIF3F-204ENST00000530219 PPP1R13BQ96KQ4 1090 aa12.55□□□□□ -0.4
EIF3F-204ENST00000530219 ATG3Q9NT62 314 aa12.55□□□□□ -0.4
EIF3F-204ENST00000530219 LAMA4Q16363 1823 aa12.54□□□□□ -0.4
EIF3F-204ENST00000530219 USP27XA6NNY8 438 aa12.54□□□□□ -0.4
EIF3F-204ENST00000530219 SMC2O95347 1197 aa12.54□□□□□ -0.4
EIF3F-204ENST00000530219 ETF1P62495 437 aaKnown RBP12.54□□□□□ -0.4
EIF3F-204ENST00000530219 SYNE3Q6ZMZ3 975 aa12.54□□□□□ -0.4
EIF3F-204ENST00000530219 NOL10Q9BSC4 688 aaKnown RBP12.54□□□□□ -0.4
EIF3F-204ENST00000530219 PCDHA7Q9UN72 937 aa12.54□□□□□ -0.4
EIF3F-204ENST00000530219 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.54□□□□□ -0.4
EIF3F-204ENST00000530219 CNTNAP4Q9C0A0 1308 aa12.53□□□□□ -0.4
EIF3F-204ENST00000530219 RFC4P35249 363 aa12.53□□□□□ -0.4
EIF3F-204ENST00000530219 TUBB4BP68371 445 aa12.53□□□□□ -0.4
EIF3F-204ENST00000530219 CEBPZQ03701 1054 aaKnown RBP12.53□□□□□ -0.4
EIF3F-204ENST00000530219 PTPN12Q05209 780 aaKnown RBP12.53□□□□□ -0.4
EIF3F-204ENST00000530219 PDIA6Q15084 440 aa12.53□□□□□ -0.4
EIF3F-204ENST00000530219 TMCO3Q6UWJ1 677 aa12.53□□□□□ -0.4
EIF3F-204ENST00000530219 LINC00301Q8NCQ3 95 aa12.53□□□□□ -0.4
EIF3F-204ENST00000530219 UBXN4Q92575 508 aa12.53□□□□□ -0.4
EIF3F-204ENST00000530219 TRMT1Q9NXH9 659 aaKnown RBP12.53□□□□□ -0.4
EIF3F-204ENST00000530219 PODXL2Q9NZ53 605 aa12.53□□□□□ -0.4
EIF3F-204ENST00000530219 TAF6LQ9Y6J9 622 aa12.53□□□□□ -0.4
EIF3F-204ENST00000530219 COL5A3P25940 1745 aaPredicted RBP12.53□□□□□ -0.4
EIF3F-204ENST00000530219 SPTLC2O15270 562 aa12.53□□□□□ -0.4
EIF3F-204ENST00000530219 RPS6KA4O75676 772 aa12.53□□□□□ -0.4
EIF3F-204ENST00000530219 ZFYP08048 801 aaPredicted RBP12.53□□□□□ -0.4
EIF3F-204ENST00000530219 CMA1P23946 247 aa12.53□□□□□ -0.4
EIF3F-204ENST00000530219 PDIA3P30101 505 aaKnown RBP12.53□□□□□ -0.4
EIF3F-204ENST00000530219 RFX5P48382 616 aaPredicted RBP12.53□□□□□ -0.4
EIF3F-204ENST00000530219 ZMYM1Q5SVZ6 1142 aa12.53□□□□□ -0.4
EIF3F-204ENST00000530219 DNAJC2Q99543 621 aaKnown RBP12.53□□□□□ -0.4
EIF3F-204ENST00000530219 V9GYY5 206 aaPredicted RBP12.53□□□□□ -0.4
EIF3F-204ENST00000530219 EFCAB8A8MWE9 144 aa12.52□□□□□ -0.4
EIF3F-204ENST00000530219 FOXN1O15353 648 aa12.52□□□□□ -0.4
EIF3F-204ENST00000530219 CTDNEP1O95476 244 aa12.52□□□□□ -0.4
EIF3F-204ENST00000530219 TFCP2Q12800 502 aa12.52□□□□□ -0.4
EIF3F-204ENST00000530219 GPS2Q13227 327 aa12.52□□□□□ -0.4
EIF3F-204ENST00000530219 E4F1Q66K89 784 aaPredicted RBP12.52□□□□□ -0.4
EIF3F-204ENST00000530219 ANKRD13DQ6ZTN6 518 aa12.52□□□□□ -0.4
EIF3F-204ENST00000530219 TMC6Q7Z403 805 aa12.52□□□□□ -0.4
EIF3F-204ENST00000530219 NBPF11Q86T75 865 aa12.52□□□□□ -0.4
EIF3F-204ENST00000530219 HOMER1Q86YM7 354 aa12.52□□□□□ -0.4
EIF3F-204ENST00000530219 MNS1Q8NEH6 495 aa12.52□□□□□ -0.4
EIF3F-204ENST00000530219 C8orf76Q96K31 380 aa12.52□□□□□ -0.4
EIF3F-204ENST00000530219 MPHOSPH8Q99549 860 aa12.52□□□□□ -0.4
EIF3F-204ENST00000530219 XPO4Q9C0E2 1151 aaKnown RBP12.52□□□□□ -0.4
EIF3F-204ENST00000530219 PAG1Q9NWQ8 432 aa12.52□□□□□ -0.4
EIF3F-204ENST00000530219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.4
EIF3F-204ENST00000530219 DNAI1Q9UI46 699 aa12.52□□□□□ -0.4
EIF3F-204ENST00000530219 HOOK1Q9UJC3 728 aaKnown RBP12.52□□□□□ -0.4
EIF3F-204ENST00000530219 E7EWF7 191 aa12.52□□□□□ -0.41
EIF3F-204ENST00000530219 APOBRQ0VD83 1088 aa12.52□□□□□ -0.41
EIF3F-204ENST00000530219 AIMP1Q12904 312 aaKnown RBP12.52□□□□□ -0.41
EIF3F-204ENST00000530219 JAKMIP3Q5VZ66 844 aa12.52□□□□□ -0.41
EIF3F-204ENST00000530219 ZNF790Q6PG37 636 aa12.52□□□□□ -0.41
EIF3F-204ENST00000530219 ELOA2Q8IYF1 753 aaPredicted RBP12.52□□□□□ -0.41
EIF3F-204ENST00000530219 MYD88Q99836 296 aa12.52□□□□□ -0.41
EIF3F-204ENST00000530219 CREBZFQ9NS37 354 aa12.52□□□□□ -0.41
EIF3F-204ENST00000530219 IFNKQ9P0W0 207 aa12.52□□□□□ -0.41
EIF3F-204ENST00000530219 CDKL5O76039 1030 aa12.51□□□□□ -0.41
EIF3F-204ENST00000530219 LMNB1P20700 586 aa12.51□□□□□ -0.41
EIF3F-204ENST00000530219 IL15P40933 162 aaPredicted RBP12.51□□□□□ -0.41
EIF3F-204ENST00000530219 RASSF7Q02833 373 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms