RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 NMIQ13287 307 aaPredicted RBP9.81□□□□□ -0.84
CMTM1-214ENST00000530141 KRT32Q14532 448 aa9.81□□□□□ -0.84
CMTM1-214ENST00000530141 PUM3Q15397 648 aaKnown RBP9.81□□□□□ -0.84
CMTM1-214ENST00000530141 MCMDC2Q4G0Z9 681 aa9.81□□□□□ -0.84
CMTM1-214ENST00000530141 LPIN2Q92539 896 aa9.81□□□□□ -0.84
CMTM1-214ENST00000530141 KCNB2Q92953 911 aa9.81□□□□□ -0.84
CMTM1-214ENST00000530141 XAGE2Q96GT9 111 aa9.81□□□□□ -0.84
CMTM1-214ENST00000530141 SETDB2Q96T68 719 aa9.81□□□□□ -0.84
CMTM1-214ENST00000530141 GLIS2Q9BZE0 524 aaPredicted RBP9.81□□□□□ -0.84
CMTM1-214ENST00000530141 TM6SF1Q9BZW5 370 aa9.81□□□□□ -0.84
CMTM1-214ENST00000530141 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.81□□□□□ -0.84
CMTM1-214ENST00000530141 SLKQ9H2G2 1235 aaPredicted RBP9.81□□□□□ -0.84
CMTM1-214ENST00000530141 ZSWIM6Q9HCJ5 1215 aa9.81□□□□□ -0.84
CMTM1-214ENST00000530141 GPHNQ9NQX3 736 aaPredicted RBP9.81□□□□□ -0.84
CMTM1-214ENST00000530141 AK9Q5TCS8 1911 aa9.81□□□□□ -0.84
CMTM1-214ENST00000530141 MED23Q9ULK4 1368 aa9.8□□□□□ -0.84
CMTM1-214ENST00000530141 PDE8BO95263 885 aa9.8□□□□□ -0.84
CMTM1-214ENST00000530141 CELF2O95319 508 aaKnown RBP9.8□□□□□ -0.84
CMTM1-214ENST00000530141 HOXB1P14653 301 aaPredicted RBP9.8□□□□□ -0.84
CMTM1-214ENST00000530141 NEK4P51957 841 aa9.8□□□□□ -0.84
CMTM1-214ENST00000530141 TIMM10P62072 90 aa9.8□□□□□ -0.84
CMTM1-214ENST00000530141 SF3B3Q15393 1217 aaKnown RBP9.8□□□□□ -0.84
CMTM1-214ENST00000530141 SLC10A5Q5PT55 438 aa9.8□□□□□ -0.84
CMTM1-214ENST00000530141 TPTE2Q6XPS3 522 aa9.8□□□□□ -0.84
CMTM1-214ENST00000530141 PNMA8AQ86V59 439 aaPredicted RBP9.8□□□□□ -0.84
CMTM1-214ENST00000530141 MARVELD3Q96A59 401 aa9.8□□□□□ -0.84
CMTM1-214ENST00000530141 PUS3Q9BZE2 481 aaKnown RBP9.8□□□□□ -0.84
CMTM1-214ENST00000530141 ANTXR1Q9H6X2 564 aa9.8□□□□□ -0.84
CMTM1-214ENST00000530141 LAMB2P55268 1798 aa9.79□□□□□ -0.84
CMTM1-214ENST00000530141 SHTN1A0MZ66 631 aa9.79□□□□□ -0.84
CMTM1-214ENST00000530141 RNF113AO15541 343 aaKnown RBP9.79□□□□□ -0.84
CMTM1-214ENST00000530141 HCLS1P14317 486 aaPredicted RBP9.79□□□□□ -0.84
CMTM1-214ENST00000530141 NUCB2P80303 420 aa9.79□□□□□ -0.84
CMTM1-214ENST00000530141 SOGA3Q5TF21 947 aa9.79□□□□□ -0.84
CMTM1-214ENST00000530141 NBPF5PQ86XG9 351 aaPredicted RBP9.79□□□□□ -0.84
CMTM1-214ENST00000530141 ANKRD18AQ8IVF6 992 aa9.79□□□□□ -0.84
CMTM1-214ENST00000530141 GPC2Q8N158 579 aa9.79□□□□□ -0.84
CMTM1-214ENST00000530141 MAP4K1Q92918 833 aa9.79□□□□□ -0.84
CMTM1-214ENST00000530141 CCDC85AQ96PX6 553 aaPredicted RBP9.79□□□□□ -0.84
CMTM1-214ENST00000530141 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.79□□□□□ -0.84
CMTM1-214ENST00000530141 RIC1Q4ADV7 1423 aa9.79□□□□□ -0.84
CMTM1-214ENST00000530141 GOLIM4O00461 696 aa9.78□□□□□ -0.84
CMTM1-214ENST00000530141 NPR1P16066 1061 aa9.78□□□□□ -0.84
CMTM1-214ENST00000530141 LMOD1P29536 600 aaPredicted RBP9.78□□□□□ -0.84
CMTM1-214ENST00000530141 FOXK1P85037 733 aa9.78□□□□□ -0.84
CMTM1-214ENST00000530141 ANKRD1Q15327 319 aa9.78□□□□□ -0.84
CMTM1-214ENST00000530141 NFKBIBQ15653 356 aa9.78□□□□□ -0.84
CMTM1-214ENST00000530141 SAPCD2Q86UD0 394 aa9.78□□□□□ -0.84
CMTM1-214ENST00000530141 VGLL2Q8N8G2 317 aa9.78□□□□□ -0.84
CMTM1-214ENST00000530141 INTS4Q96HW7 963 aaKnown RBP9.78□□□□□ -0.84
CMTM1-214ENST00000530141 ZSCAN31Q96LW9 406 aaPredicted RBP9.78□□□□□ -0.84
CMTM1-214ENST00000530141 NLRP3Q96P20 1036 aa9.78□□□□□ -0.84
CMTM1-214ENST00000530141 GBP4Q96PP9 640 aa9.78□□□□□ -0.84
CMTM1-214ENST00000530141 RBM8AQ9Y5S9 174 aaKnown RBP9.78□□□□□ -0.84
CMTM1-214ENST00000530141 SNX14Q9Y5W7 946 aa9.78□□□□□ -0.84
CMTM1-214ENST00000530141 CYP46A1Q9Y6A2 500 aa9.78□□□□□ -0.84
CMTM1-214ENST00000530141 MYH3P11055 1940 aa9.78□□□□□ -0.84
CMTM1-214ENST00000530141 PDIA4P13667 645 aaKnown RBP9.77□□□□□ -0.85
CMTM1-214ENST00000530141 FGFR2P21802 821 aa9.77□□□□□ -0.85
CMTM1-214ENST00000530141 ARID4AP29374 1257 aaPredicted RBP9.77□□□□□ -0.85
CMTM1-214ENST00000530141 EMP3P54852 163 aa9.77□□□□□ -0.85
CMTM1-214ENST00000530141 NBR1Q14596 966 aa9.77□□□□□ -0.85
CMTM1-214ENST00000530141 NECTIN1Q15223 517 aa9.77□□□□□ -0.85
CMTM1-214ENST00000530141 TSGA10IPQ3SY00 556 aa9.77□□□□□ -0.85
CMTM1-214ENST00000530141 ZMYM1Q5SVZ6 1142 aa9.77□□□□□ -0.85
CMTM1-214ENST00000530141 GPR153Q6NV75 609 aa9.77□□□□□ -0.85
CMTM1-214ENST00000530141 DDX46Q7L014 1031 aaKnown RBP9.77□□□□□ -0.85
CMTM1-214ENST00000530141 SPRYD3Q8NCJ5 442 aa9.77□□□□□ -0.85
CMTM1-214ENST00000530141 CHMP4CQ96CF2 233 aa9.77□□□□□ -0.85
CMTM1-214ENST00000530141 FAM227BQ96M60 508 aa9.77□□□□□ -0.85
CMTM1-214ENST00000530141 DSCC1Q9BVC3 393 aa9.77□□□□□ -0.85
CMTM1-214ENST00000530141 CRISPLD2Q9H0B8 497 aa9.77□□□□□ -0.85
CMTM1-214ENST00000530141 GNL3LQ9NVN8 582 aaKnown RBP9.77□□□□□ -0.85
CMTM1-214ENST00000530141 BSDC1Q9NW68 430 aaPredicted RBP9.77□□□□□ -0.85
CMTM1-214ENST00000530141 CTNNA3Q9UI47 895 aa9.77□□□□□ -0.85
CMTM1-214ENST00000530141 A0A0D9SFI3 127 aa9.76□□□□□ -0.85
CMTM1-214ENST00000530141 DDX11L8A8MPP1 907 aa9.76□□□□□ -0.85
CMTM1-214ENST00000530141 IGSF3O75054 1194 aa9.76□□□□□ -0.85
CMTM1-214ENST00000530141 TAF5LO75529 589 aa9.76□□□□□ -0.85
CMTM1-214ENST00000530141 HMGB1P09429 215 aaKnown RBP9.76□□□□□ -0.85
CMTM1-214ENST00000530141 DDIT3P35638 169 aa9.76□□□□□ -0.85
CMTM1-214ENST00000530141 EIF6P56537 245 aaKnown RBP9.76□□□□□ -0.85
CMTM1-214ENST00000530141 UBE4AQ14139 1066 aa9.76□□□□□ -0.85
CMTM1-214ENST00000530141 VPS53Q5VIR6 699 aa9.76□□□□□ -0.85
CMTM1-214ENST00000530141 PRPF38BQ5VTL8 546 aaKnown RBP9.76□□□□□ -0.85
CMTM1-214ENST00000530141 CREB3L3Q68CJ9 461 aa9.76□□□□□ -0.85
CMTM1-214ENST00000530141 TRPM4Q8TD43 1214 aa9.76□□□□□ -0.85
CMTM1-214ENST00000530141 ANKRD2Q9GZV1 360 aa9.76□□□□□ -0.85
CMTM1-214ENST00000530141 SH2B1Q9NRF2 756 aaPredicted RBP9.76□□□□□ -0.85
CMTM1-214ENST00000530141 PALD1Q9ULE6 856 aa9.76□□□□□ -0.85
CMTM1-214ENST00000530141 GOLGA6L22H0YM25 854 aa9.75□□□□□ -0.85
CMTM1-214ENST00000530141 SLC27A2O14975 620 aa9.75□□□□□ -0.85
CMTM1-214ENST00000530141 MAP2K2P36507 400 aa9.75□□□□□ -0.85
CMTM1-214ENST00000530141 PTH1RQ03431 593 aa9.75□□□□□ -0.85
CMTM1-214ENST00000530141 CUL4AQ13619 759 aa9.75□□□□□ -0.85
CMTM1-214ENST00000530141 DSG2Q14126 1118 aa9.75□□□□□ -0.85
CMTM1-214ENST00000530141 AOC3Q16853 763 aa9.75□□□□□ -0.85
CMTM1-214ENST00000530141 CCDC102BQ68D86 513 aa9.75□□□□□ -0.85
CMTM1-214ENST00000530141 TMED8Q6PL24 325 aaPredicted RBP9.75□□□□□ -0.85
CMTM1-214ENST00000530141 BLOC1S2Q6QNY1 142 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms