RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 KIF4BQ2VIQ3 1234 aa6.13□□□□□ -1.43
CTR9-205ENST00000529898 SHISA5Q8N114 240 aa6.13□□□□□ -1.43
CTR9-205ENST00000529898 C3orf58Q8NDZ4 430 aa6.13□□□□□ -1.43
CTR9-205ENST00000529898 CCDC86Q9H6F5 360 aaKnown RBP6.13□□□□□ -1.43
CTR9-205ENST00000529898 C1GALT1Q9NS00 363 aa6.13□□□□□ -1.43
CTR9-205ENST00000529898 RAD18Q9NS91 495 aa6.13□□□□□ -1.43
CTR9-205ENST00000529898 ATG3Q9NT62 314 aa6.13□□□□□ -1.43
CTR9-205ENST00000529898 FAM105AQ9NUU6 356 aa6.13□□□□□ -1.43
CTR9-205ENST00000529898 TMEM39AQ9NV64 488 aa6.13□□□□□ -1.43
CTR9-205ENST00000529898 CACNA2D2Q9NY47 1150 aa6.13□□□□□ -1.43
CTR9-205ENST00000529898 CRIM1Q9NZV1 1036 aa6.13□□□□□ -1.43
CTR9-205ENST00000529898 PPP1R9AQ9ULJ8 1098 aa6.13□□□□□ -1.43
CTR9-205ENST00000529898 COL17A1Q9UMD9 1497 aaPredicted RBP6.13□□□□□ -1.43
CTR9-205ENST00000529898 PNMA6FA0A0J9YX94 578 aa6.12□□□□□ -1.43
CTR9-205ENST00000529898 TMPRSS2O15393 492 aa6.12□□□□□ -1.43
CTR9-205ENST00000529898 ZNF862O60290 1169 aa6.12□□□□□ -1.43
CTR9-205ENST00000529898 EIF5BO60841 1220 aaKnown RBP6.12□□□□□ -1.43
CTR9-205ENST00000529898 PRNPP04156 253 aa6.12□□□□□ -1.43
CTR9-205ENST00000529898 NFICP08651 508 aa6.12□□□□□ -1.43
CTR9-205ENST00000529898 GSTP1P09211 210 aaKnown RBP6.12□□□□□ -1.43
CTR9-205ENST00000529898 HOXA10P31260 410 aaPredicted RBP6.12□□□□□ -1.43
CTR9-205ENST00000529898 FCGRTP55899 365 aa6.12□□□□□ -1.43
CTR9-205ENST00000529898 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.12□□□□□ -1.43
CTR9-205ENST00000529898 AKAP4Q5JQC9 854 aa6.12□□□□□ -1.43
CTR9-205ENST00000529898 DTHD1Q6ZMT9 781 aa6.12□□□□□ -1.43
CTR9-205ENST00000529898 DYMQ7RTS9 669 aa6.12□□□□□ -1.43
CTR9-205ENST00000529898 KRTAP9-2Q9BYQ4 174 aa6.12□□□□□ -1.43
CTR9-205ENST00000529898 SRCIN1Q9C0H9 1055 aa6.12□□□□□ -1.43
CTR9-205ENST00000529898 LEMD3Q9Y2U8 911 aa6.12□□□□□ -1.43
CTR9-205ENST00000529898 GIPC1O14908 333 aa6.11□□□□□ -1.43
CTR9-205ENST00000529898 ASPAP45381 313 aa6.11□□□□□ -1.43
CTR9-205ENST00000529898 GP2P55259 537 aaKnown RBP6.11□□□□□ -1.43
CTR9-205ENST00000529898 PPP2R3AQ06190 1150 aa6.11□□□□□ -1.43
CTR9-205ENST00000529898 NXPE4Q6UWF7 544 aa6.11□□□□□ -1.43
CTR9-205ENST00000529898 ZSCAN29Q8IWY8 852 aaPredicted RBP6.11□□□□□ -1.43
CTR9-205ENST00000529898 FBXL6Q8N531 539 aa6.11□□□□□ -1.43
CTR9-205ENST00000529898 WDR89Q96FK6 387 aaPredicted RBP6.11□□□□□ -1.43
CTR9-205ENST00000529898 OSBPL1AQ9BXW6 950 aa6.11□□□□□ -1.43
CTR9-205ENST00000529898 OAS3Q9Y6K5 1087 aaKnown RBP6.11□□□□□ -1.43
CTR9-205ENST00000529898 IVNS1ABPQ9Y6Y0 642 aa6.11□□□□□ -1.43
CTR9-205ENST00000529898 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.1□□□□□ -1.43
CTR9-205ENST00000529898 WNT11O96014 354 aa6.1□□□□□ -1.43
CTR9-205ENST00000529898 SLFN14P0C7P3 912 aa6.1□□□□□ -1.43
CTR9-205ENST00000529898 CYP27A1Q02318 531 aa6.1□□□□□ -1.43
CTR9-205ENST00000529898 ZNF252P-AS1Q0IIN9 211 aa6.1□□□□□ -1.43
CTR9-205ENST00000529898 PDE3AQ14432 1141 aa6.1□□□□□ -1.43
CTR9-205ENST00000529898 MCTP1Q6DN14 999 aa6.1□□□□□ -1.43
CTR9-205ENST00000529898 TBC1D32Q96NH3 1257 aa6.1□□□□□ -1.43
CTR9-205ENST00000529898 DISC1Q9NRI5 854 aa6.1□□□□□ -1.43
CTR9-205ENST00000529898 LIG1P18858 919 aa6.09□□□□□ -1.43
CTR9-205ENST00000529898 NME2P22392 152 aa6.09□□□□□ -1.43
CTR9-205ENST00000529898 ARNTP27540 789 aa6.09□□□□□ -1.43
CTR9-205ENST00000529898 ZNF157P51786 506 aaPredicted RBP6.09□□□□□ -1.43
CTR9-205ENST00000529898 ID3Q02535 119 aa6.09□□□□□ -1.43
CTR9-205ENST00000529898 ALG1LQ6GMV1 187 aa6.09□□□□□ -1.43
CTR9-205ENST00000529898 OGFOD3Q6PK18 319 aa6.09□□□□□ -1.43
CTR9-205ENST00000529898 NFXL1Q6ZNB6 911 aa6.09□□□□□ -1.43
CTR9-205ENST00000529898 STK35Q8TDR2 534 aa6.09□□□□□ -1.43
CTR9-205ENST00000529898 NECAB3Q96P71 396 aaPredicted RBP6.09□□□□□ -1.43
CTR9-205ENST00000529898 FANCD2OSQ96PS1 177 aa6.09□□□□□ -1.43
CTR9-205ENST00000529898 OSBPL7Q9BZF2 842 aa6.09□□□□□ -1.43
CTR9-205ENST00000529898 ATXN3LQ9H3M9 355 aa6.09□□□□□ -1.43
CTR9-205ENST00000529898 PPM1HQ9ULR3 514 aa6.09□□□□□ -1.43
CTR9-205ENST00000529898 AP4E1Q9UPM8 1137 aa6.09□□□□□ -1.43
CTR9-205ENST00000529898 FAM170BA6NMN3 283 aa6.08□□□□□ -1.44
CTR9-205ENST00000529898 PATL2C9JE40 543 aaKnown RBP6.08□□□□□ -1.44
CTR9-205ENST00000529898 DYNC1LI2O43237 492 aaPredicted RBP6.08□□□□□ -1.44
CTR9-205ENST00000529898 GSTT1P30711 240 aa6.08□□□□□ -1.44
CTR9-205ENST00000529898 HNRNPUQ00839 825 aaKnown RBP eCLIP6.08□□□□□ -1.44
CTR9-205ENST00000529898 SCARA3Q6AZY7 606 aa6.08□□□□□ -1.44
CTR9-205ENST00000529898 EMILIN2Q9BXX0 1053 aa6.08□□□□□ -1.44
CTR9-205ENST00000529898 CENPBP07199 599 aaPredicted RBP6.07□□□□□ -1.44
CTR9-205ENST00000529898 RAB6AP20340 208 aa6.07□□□□□ -1.44
CTR9-205ENST00000529898 ZC3H12AQ5D1E8 599 aaKnown RBP6.07□□□□□ -1.44
CTR9-205ENST00000529898 DUSP27Q5VZP5 1158 aa6.07□□□□□ -1.44
CTR9-205ENST00000529898 SULF2Q8IWU5 870 aa6.07□□□□□ -1.44
CTR9-205ENST00000529898 CCDC39Q9UFE4 941 aa6.07□□□□□ -1.44
CTR9-205ENST00000529898 GPN3Q9UHW5 284 aaPredicted RBP6.07□□□□□ -1.44
CTR9-205ENST00000529898 KRTAP9-6A0A140TA67 174 aa6.06□□□□□ -1.44
CTR9-205ENST00000529898 ENC1O14682 589 aa6.06□□□□□ -1.44
CTR9-205ENST00000529898 CYP26A1O43174 497 aa6.06□□□□□ -1.44
CTR9-205ENST00000529898 BMP6P22004 513 aa6.06□□□□□ -1.44
CTR9-205ENST00000529898 ERVK-24P63145 666 aa6.06□□□□□ -1.44
CTR9-205ENST00000529898 COL19A1Q14993 1142 aa6.06□□□□□ -1.44
CTR9-205ENST00000529898 ZNF765Q7L2R6 523 aa6.06□□□□□ -1.44
CTR9-205ENST00000529898 FRMD6Q96NE9 622 aa6.06□□□□□ -1.44
CTR9-205ENST00000529898 CEP44Q9C0F1 390 aa6.06□□□□□ -1.44
CTR9-205ENST00000529898 BSDC1Q9NW68 430 aaPredicted RBP6.06□□□□□ -1.44
CTR9-205ENST00000529898 AKAP2Q9Y2D5 859 aa6.06□□□□□ -1.44
CTR9-205ENST00000529898 MAPK8P45983 427 aa6.05□□□□□ -1.44
CTR9-205ENST00000529898 IRAK1P51617 712 aa6.05□□□□□ -1.44
CTR9-205ENST00000529898 RING1Q06587 406 aa6.05□□□□□ -1.44
CTR9-205ENST00000529898 VSIG10LQ86VR7 867 aa6.05□□□□□ -1.44
CTR9-205ENST00000529898 SETDB2Q96T68 719 aa6.05□□□□□ -1.44
CTR9-205ENST00000529898 ZC3H12CQ9C0D7 883 aaKnown RBP6.05□□□□□ -1.44
CTR9-205ENST00000529898 ADGRE2Q9UHX3 823 aa6.05□□□□□ -1.44
CTR9-205ENST00000529898 WWC3Q9ULE0 1092 aa6.05□□□□□ -1.44
CTR9-205ENST00000529898 DAGLAQ9Y4D2 1042 aa6.05□□□□□ -1.44
CTR9-205ENST00000529898 TRIM37O94972 964 aa6.04□□□□□ -1.44
CTR9-205ENST00000529898 TTLL4Q14679 1199 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms