RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 CWC27Q6UX04 472 aaKnown RBP16.41■□□□□ 0.22
SMCO4-205ENST00000529714 AIDAQ96BJ3 306 aa16.41■□□□□ 0.22
SMCO4-205ENST00000529714 PUS7LQ9H0K6 701 aaKnown RBP16.41■□□□□ 0.22
SMCO4-205ENST00000529714 M0R2C6 588 aa16.4■□□□□ 0.22
SMCO4-205ENST00000529714 EPS15P42566 896 aa16.4■□□□□ 0.22
SMCO4-205ENST00000529714 KIF4BQ2VIQ3 1234 aa16.4■□□□□ 0.22
SMCO4-205ENST00000529714 MIGA1Q8NAN2 632 aa16.4■□□□□ 0.22
SMCO4-205ENST00000529714 AATFQ9NY61 560 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMCO4-205ENST00000529714 WNT10BO00744 389 aa16.39■□□□□ 0.21
SMCO4-205ENST00000529714 SGSM2O43147 1006 aa16.39■□□□□ 0.21
SMCO4-205ENST00000529714 GPAA1O43292 621 aa16.39■□□□□ 0.21
SMCO4-205ENST00000529714 MYO1BO43795 1136 aa16.39■□□□□ 0.21
SMCO4-205ENST00000529714 EIF5BO60841 1220 aaKnown RBP16.39■□□□□ 0.21
SMCO4-205ENST00000529714 MBD4O95243 580 aa16.39■□□□□ 0.21
SMCO4-205ENST00000529714 GNAT2P19087 354 aa16.39■□□□□ 0.21
SMCO4-205ENST00000529714 RHBDL3P58872 404 aa16.39■□□□□ 0.21
SMCO4-205ENST00000529714 USP50Q70EL3 339 aaPredicted RBP16.39■□□□□ 0.21
SMCO4-205ENST00000529714 SAMD7Q7Z3H4 446 aa16.39■□□□□ 0.21
SMCO4-205ENST00000529714 PRMT6Q96LA8 375 aaPredicted RBP16.39■□□□□ 0.21
SMCO4-205ENST00000529714 SEC62Q99442 399 aaKnown RBP16.39■□□□□ 0.21
SMCO4-205ENST00000529714 ESYT1Q9BSJ8 1104 aa16.39■□□□□ 0.21
SMCO4-205ENST00000529714 CCDC171Q6TFL3 1326 aa16.39■□□□□ 0.21
SMCO4-205ENST00000529714 RPAP1Q9BWH6 1393 aaPredicted RBP16.38■□□□□ 0.21
SMCO4-205ENST00000529714 FOCADQ5VW36 1801 aa16.38■□□□□ 0.21
SMCO4-205ENST00000529714 CDK5RAP2Q96SN8 1893 aa16.38■□□□□ 0.21
SMCO4-205ENST00000529714 POTECB2RU33 542 aa16.38■□□□□ 0.21
SMCO4-205ENST00000529714 VEGFAP15692 232 aaPredicted RBP16.38■□□□□ 0.21
SMCO4-205ENST00000529714 EPHX2P34913 555 aa16.38■□□□□ 0.21
SMCO4-205ENST00000529714 TBC1D10BQ4KMP7 808 aaPredicted RBP16.38■□□□□ 0.21
SMCO4-205ENST00000529714 CDC42EP5Q6NZY7 148 aa16.38■□□□□ 0.21
SMCO4-205ENST00000529714 LCORLQ8N3X6 602 aa16.38■□□□□ 0.21
SMCO4-205ENST00000529714 STRBPQ96SI9 672 aaKnown RBP16.38■□□□□ 0.21
SMCO4-205ENST00000529714 CRNKL1Q9BZJ0 848 aaKnown RBP16.38■□□□□ 0.21
SMCO4-205ENST00000529714 TAF1DQ9H5J8 278 aaPredicted RBP16.38■□□□□ 0.21
SMCO4-205ENST00000529714 ARMT1Q9H993 441 aa16.38■□□□□ 0.21
SMCO4-205ENST00000529714 PCDHAC2Q9Y5I4 1007 aa16.38■□□□□ 0.21
SMCO4-205ENST00000529714 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
SMCO4-205ENST00000529714 EGFRP00533 1210 aa16.37■□□□□ 0.21
SMCO4-205ENST00000529714 DYNLL1P63167 89 aaKnown RBP16.37■□□□□ 0.21
SMCO4-205ENST00000529714 NBPF9Q3BBW0 867 aa16.37■□□□□ 0.21
SMCO4-205ENST00000529714 SPDYE2Q495Y8 402 aa16.37■□□□□ 0.21
SMCO4-205ENST00000529714 FKBP1CQ5VVH2 108 aa16.37■□□□□ 0.21
SMCO4-205ENST00000529714 PNMA8AQ86V59 439 aaPredicted RBP16.37■□□□□ 0.21
SMCO4-205ENST00000529714 TRPM4Q8TD43 1214 aa16.37■□□□□ 0.21
SMCO4-205ENST00000529714 USP40Q9NVE5 1235 aa16.37■□□□□ 0.21
SMCO4-205ENST00000529714 RBM26Q5T8P6 1007 aaKnown RBP16.36■□□□□ 0.21
SMCO4-205ENST00000529714 ZNF589Q86UQ0 364 aaPredicted RBP16.36■□□□□ 0.21
SMCO4-205ENST00000529714 TEX11Q8IYF3 940 aa16.36■□□□□ 0.21
SMCO4-205ENST00000529714 SH3RF3Q8TEJ3 882 aaPredicted RBP16.36■□□□□ 0.21
SMCO4-205ENST00000529714 ZC3H15Q8WU90 426 aaKnown RBP16.36■□□□□ 0.21
SMCO4-205ENST00000529714 IDI2Q9BXS1 227 aa16.36■□□□□ 0.21
SMCO4-205ENST00000529714 TDRD3Q9H7E2 651 aaKnown RBP16.36■□□□□ 0.21
SMCO4-205ENST00000529714 TMOD2Q9NZR1 351 aa16.36■□□□□ 0.21
SMCO4-205ENST00000529714 PITPNM2Q9BZ72 1349 aa16.36■□□□□ 0.21
SMCO4-205ENST00000529714 WDHD1O75717 1129 aaPredicted RBP16.35■□□□□ 0.21
SMCO4-205ENST00000529714 HIRAP54198 1017 aaPredicted RBP16.35■□□□□ 0.21
SMCO4-205ENST00000529714 C8orf34Q49A92 452 aa16.35■□□□□ 0.21
SMCO4-205ENST00000529714 GIMAP6Q6P9H5 292 aa16.35■□□□□ 0.21
SMCO4-205ENST00000529714 CCDC129Q6ZRS4 1044 aa16.35■□□□□ 0.21
SMCO4-205ENST00000529714 IL25Q9H293 177 aa16.35■□□□□ 0.21
SMCO4-205ENST00000529714 ATP8A2Q9NTI2 1148 aa16.35■□□□□ 0.21
SMCO4-205ENST00000529714 ZNF70Q9UC06 446 aaPredicted RBP16.35■□□□□ 0.21
SMCO4-205ENST00000529714 NAV1Q8NEY1 1877 aa16.34■□□□□ 0.21
SMCO4-205ENST00000529714 PATL2C9JE40 543 aaKnown RBP16.34■□□□□ 0.21
SMCO4-205ENST00000529714 REC8O95072 547 aa16.34■□□□□ 0.21
SMCO4-205ENST00000529714 DSCC1Q9BVC3 393 aa16.34■□□□□ 0.21
SMCO4-205ENST00000529714 RRAGCQ9HB90 399 aa16.34■□□□□ 0.21
SMCO4-205ENST00000529714 PGAP2Q9UHJ9 254 aa16.34■□□□□ 0.21
SMCO4-205ENST00000529714 SLC4A4Q9Y6R1 1079 aa16.34■□□□□ 0.21
SMCO4-205ENST00000529714 ZMYM6O95789 1325 aa16.34■□□□□ 0.21
SMCO4-205ENST00000529714 COL2A1P02458 1487 aaPredicted RBP16.34■□□□□ 0.21
SMCO4-205ENST00000529714 DDX60LQ5H9U9 1706 aaKnown RBP16.33■□□□□ 0.21
SMCO4-205ENST00000529714 GSG1L2A8MUP6 293 aa16.33■□□□□ 0.2
SMCO4-205ENST00000529714 EPB41L2O43491 1005 aaKnown RBP16.33■□□□□ 0.2
SMCO4-205ENST00000529714 ENTPD3O75355 529 aa16.33■□□□□ 0.2
SMCO4-205ENST00000529714 TNFAIP1Q13829 316 aa16.33■□□□□ 0.2
SMCO4-205ENST00000529714 ALX1Q15699 326 aa16.33■□□□□ 0.2
SMCO4-205ENST00000529714 KIAA1211Q6ZU35 1233 aa16.33■□□□□ 0.2
SMCO4-205ENST00000529714 FAM83AQ86UY5 434 aa16.33■□□□□ 0.2
SMCO4-205ENST00000529714 APOBEC3FQ8IUX4 373 aaKnown RBP16.33■□□□□ 0.2
SMCO4-205ENST00000529714 DDRGK1Q96HY6 314 aa16.33■□□□□ 0.2
SMCO4-205ENST00000529714 NACAP1Q9BZK3 213 aa16.33■□□□□ 0.2
SMCO4-205ENST00000529714 MKRN1Q9UHC7 482 aaKnown RBP16.33■□□□□ 0.2
SMCO4-205ENST00000529714 CLRN2A0PK11 232 aa16.32■□□□□ 0.2
SMCO4-205ENST00000529714 FOXP2O15409 715 aa16.32■□□□□ 0.2
SMCO4-205ENST00000529714 PRKAB2O43741 272 aa16.32■□□□□ 0.2
SMCO4-205ENST00000529714 HSPD1P10809 573 aaKnown RBP16.32■□□□□ 0.2
SMCO4-205ENST00000529714 FLT1P17948 1338 aa16.32■□□□□ 0.2
SMCO4-205ENST00000529714 USP5P45974 858 aa16.32■□□□□ 0.2
SMCO4-205ENST00000529714 TNNI2P48788 182 aa16.32■□□□□ 0.2
SMCO4-205ENST00000529714 VPS53Q5VIR6 699 aa16.32■□□□□ 0.2
SMCO4-205ENST00000529714 ANGEL2Q5VTE6 544 aaKnown RBP16.32■□□□□ 0.2
SMCO4-205ENST00000529714 TGFBRAP1Q8WUH2 860 aa16.32■□□□□ 0.2
SMCO4-205ENST00000529714 SDR42E1Q8WUS8 393 aa16.32■□□□□ 0.2
SMCO4-205ENST00000529714 NMRK2Q9NPI5 230 aa16.32■□□□□ 0.2
SMCO4-205ENST00000529714 DCP1AQ9NPI6 582 aaPredicted RBP16.32■□□□□ 0.2
SMCO4-205ENST00000529714 GGA3Q9NZ52 723 aa16.32■□□□□ 0.2
SMCO4-205ENST00000529714 NFIAQ12857 509 aa16.31■□□□□ 0.2
SMCO4-205ENST00000529714 ZNF526Q8TF50 670 aaPredicted RBP16.31■□□□□ 0.2
SMCO4-205ENST00000529714 LSG1Q9H089 658 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms