RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 ZNF70Q9UC06 446 aaPredicted RBP10.84□□□□□ -0.67
TGFBR3-208ENST00000529608 CHMP3Q9Y3E7 222 aa10.84□□□□□ -0.67
TGFBR3-208ENST00000529608 FAM205AQ6ZU69 1335 aa10.84□□□□□ -0.67
TGFBR3-208ENST00000529608 NEFLP07196 543 aa10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 IREB2P48200 963 aaKnown RBP10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 RBM5P52756 815 aaKnown RBP eCLIP10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 SP3Q02447 781 aa10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 EXOSC9Q06265 439 aaKnown RBP10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 SUPT20HL1Q3ZLR7 823 aa10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 INTS3Q68E01 1043 aaKnown RBP10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 FAM43AQ8N2R8 423 aa10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 TDRD7Q8NHU6 1098 aaKnown RBP10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 ERO1AQ96HE7 468 aa10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 KAZALD1Q96I82 304 aa10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 FAM84BQ96KN1 310 aaPredicted RBP10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 TMEM39BQ9GZU3 492 aa10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 EFCC1Q9HA90 598 aa10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 SUPT16HQ9Y5B9 1047 aaKnown RBP10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 IL16Q14005 1332 aa10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 ZBED9Q6R2W3 1325 aa10.83□□□□□ -0.68
TGFBR3-208ENST00000529608 UNCXA6NJT0 531 aa10.82□□□□□ -0.68
TGFBR3-208ENST00000529608 TCP10L2B9ZVM9 353 aa10.82□□□□□ -0.68
TGFBR3-208ENST00000529608 MYO1BO43795 1136 aa10.82□□□□□ -0.68
TGFBR3-208ENST00000529608 VGLL4Q14135 290 aa10.82□□□□□ -0.68
TGFBR3-208ENST00000529608 MFSD14BQ5SR56 506 aa10.82□□□□□ -0.68
TGFBR3-208ENST00000529608 LDHAL6AQ6ZMR3 332 aa10.82□□□□□ -0.68
TGFBR3-208ENST00000529608 RYDENQ9NUL5 291 aaKnown RBP10.82□□□□□ -0.68
TGFBR3-208ENST00000529608 TTF2Q9UNY4 1162 aaKnown RBP10.82□□□□□ -0.68
TGFBR3-208ENST00000529608 SALL2Q9Y467 1007 aaPredicted RBP10.82□□□□□ -0.68
TGFBR3-208ENST00000529608 PTCH2Q9Y6C5 1203 aa10.82□□□□□ -0.68
TGFBR3-208ENST00000529608 FXR1P51114 621 aaKnown RBP eCLIP10.81□□□□□ -0.68
TGFBR3-208ENST00000529608 CACNB3P54284 484 aa10.81□□□□□ -0.68
TGFBR3-208ENST00000529608 DZIP1LQ8IYY4 767 aaKnown RBP10.81□□□□□ -0.68
TGFBR3-208ENST00000529608 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.81□□□□□ -0.68
TGFBR3-208ENST00000529608 ZNF333Q96JL9 665 aa10.81□□□□□ -0.68
TGFBR3-208ENST00000529608 ARHGAP39Q9C0H5 1083 aa10.81□□□□□ -0.68
TGFBR3-208ENST00000529608 CNNM1Q9NRU3 951 aa10.81□□□□□ -0.68
TGFBR3-208ENST00000529608 IQSEC3Q9UPP2 1182 aaPredicted RBP10.81□□□□□ -0.68
TGFBR3-208ENST00000529608 KIAA0100Q14667 2235 aaKnown RBP10.8□□□□□ -0.68
TGFBR3-208ENST00000529608 CCL15-CCL14A0A0B4J2E2 113 aa10.8□□□□□ -0.68
TGFBR3-208ENST00000529608 GRM8O00222 908 aa10.8□□□□□ -0.68
TGFBR3-208ENST00000529608 MYCP01106 439 aaPredicted RBP10.8□□□□□ -0.68
TGFBR3-208ENST00000529608 CRKP46108 304 aa10.8□□□□□ -0.68
TGFBR3-208ENST00000529608 CCL15Q16663 113 aa10.8□□□□□ -0.68
TGFBR3-208ENST00000529608 CCDC57Q2TAC2 916 aa10.8□□□□□ -0.68
TGFBR3-208ENST00000529608 GCC1Q96CN9 775 aa10.8□□□□□ -0.68
TGFBR3-208ENST00000529608 SUCLG2Q96I99 432 aa10.8□□□□□ -0.68
TGFBR3-208ENST00000529608 SERPINA10Q9UK55 444 aa10.8□□□□□ -0.68
TGFBR3-208ENST00000529608 NBPF7P0C2Y1 421 aaPredicted RBP10.79□□□□□ -0.68
TGFBR3-208ENST00000529608 CTGFP29279 349 aa10.79□□□□□ -0.68
TGFBR3-208ENST00000529608 HIBADHP31937 336 aaKnown RBP10.79□□□□□ -0.68
TGFBR3-208ENST00000529608 TAF1CQ15572 869 aaPredicted RBP10.79□□□□□ -0.68
TGFBR3-208ENST00000529608 OTUD7BQ6GQQ9 843 aa10.79□□□□□ -0.68
TGFBR3-208ENST00000529608 SH3TC2Q8TF17 1288 aa10.79□□□□□ -0.68
TGFBR3-208ENST00000529608 BBXQ8WY36 941 aaPredicted RBP10.79□□□□□ -0.68
TGFBR3-208ENST00000529608 RIPOR2Q9Y4F9 1068 aa10.79□□□□□ -0.68
TGFBR3-208ENST00000529608 SNCAIPQ9Y6H5 919 aa10.79□□□□□ -0.68
TGFBR3-208ENST00000529608 MYH13Q9UKX3 1938 aa10.79□□□□□ -0.68
TGFBR3-208ENST00000529608 MAP3K9P80192 1104 aa10.78□□□□□ -0.68
TGFBR3-208ENST00000529608 UBE4AQ14139 1066 aa10.78□□□□□ -0.68
TGFBR3-208ENST00000529608 LRRC24Q50LG9 513 aa10.78□□□□□ -0.68
TGFBR3-208ENST00000529608 FBXO33Q7Z6M2 555 aa10.78□□□□□ -0.68
TGFBR3-208ENST00000529608 ZKSCAN4Q969J2 545 aaPredicted RBP10.78□□□□□ -0.68
TGFBR3-208ENST00000529608 FAM163AQ96GL9 167 aaPredicted RBP10.78□□□□□ -0.68
TGFBR3-208ENST00000529608 SPDYE5A6NIY4 337 aa10.77□□□□□ -0.69
TGFBR3-208ENST00000529608 BTBD19C9JJ37 291 aa10.77□□□□□ -0.69
TGFBR3-208ENST00000529608 GTF2A2P52657 109 aa10.77□□□□□ -0.69
TGFBR3-208ENST00000529608 CHAF1AQ13111 956 aaPredicted RBP10.77□□□□□ -0.69
TGFBR3-208ENST00000529608 TNFAIP1Q13829 316 aa10.77□□□□□ -0.69
TGFBR3-208ENST00000529608 SLC9C1Q4G0N8 1177 aa10.77□□□□□ -0.69
TGFBR3-208ENST00000529608 TAF7LQ5H9L4 462 aa10.77□□□□□ -0.69
TGFBR3-208ENST00000529608 VGLL2Q8N8G2 317 aa10.77□□□□□ -0.69
TGFBR3-208ENST00000529608 KLHDC4Q8TBB5 520 aa10.77□□□□□ -0.69
TGFBR3-208ENST00000529608 ZFYVE28Q9HCC9 887 aa10.77□□□□□ -0.69
TGFBR3-208ENST00000529608 MGAMO43451 1857 aa10.76□□□□□ -0.69
TGFBR3-208ENST00000529608 IRF6O14896 467 aa10.76□□□□□ -0.69
TGFBR3-208ENST00000529608 SNPHO15079 494 aa10.76□□□□□ -0.69
TGFBR3-208ENST00000529608 TLR2O60603 784 aa10.76□□□□□ -0.69
TGFBR3-208ENST00000529608 ERICH6BQ5W0A0 696 aa10.76□□□□□ -0.69
TGFBR3-208ENST00000529608 APOBEC3HQ6NTF7 200 aaKnown RBP10.76□□□□□ -0.69
TGFBR3-208ENST00000529608 SLC4A10Q6U841 1118 aa10.76□□□□□ -0.69
TGFBR3-208ENST00000529608 WDR63Q8IWG1 891 aa10.76□□□□□ -0.69
TGFBR3-208ENST00000529608 ANKRD44Q8N8A2 993 aa10.76□□□□□ -0.69
TGFBR3-208ENST00000529608 SHISA4Q96DD7 197 aa10.76□□□□□ -0.69
TGFBR3-208ENST00000529608 BICC1Q9H694 974 aaKnown RBP10.76□□□□□ -0.69
TGFBR3-208ENST00000529608 C9orf78Q9NZ63 289 aaPredicted RBP10.76□□□□□ -0.69
TGFBR3-208ENST00000529608 SZT2Q5T011 3432 aa10.75□□□□□ -0.69
TGFBR3-208ENST00000529608 H0YGN5 161 aa10.75□□□□□ -0.69
TGFBR3-208ENST00000529608 ST18O60284 1047 aa10.75□□□□□ -0.69
TGFBR3-208ENST00000529608 ALDH1L1O75891 902 aa10.75□□□□□ -0.69
TGFBR3-208ENST00000529608 HOXB3P14651 431 aaPredicted RBP10.75□□□□□ -0.69
TGFBR3-208ENST00000529608 BCAMP50895 628 aa10.75□□□□□ -0.69
TGFBR3-208ENST00000529608 LACTBP83111 547 aaPredicted RBP10.75□□□□□ -0.69
TGFBR3-208ENST00000529608 MTFR1Q15390 333 aa10.75□□□□□ -0.69
TGFBR3-208ENST00000529608 RABL6Q3YEC7 729 aaPredicted RBP10.75□□□□□ -0.69
TGFBR3-208ENST00000529608 WRNIP1Q96S55 665 aa10.75□□□□□ -0.69
TGFBR3-208ENST00000529608 SRCIN1Q9C0H9 1055 aa10.75□□□□□ -0.69
TGFBR3-208ENST00000529608 CSADQ9Y600 493 aa10.75□□□□□ -0.69
TGFBR3-208ENST00000529608 UTYO14607 1347 aa10.75□□□□□ -0.69
TGFBR3-208ENST00000529608 C2orf72A6NCS6 295 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms