RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 KCNB2Q92953 911 aa7.91□□□□□ -1.14
CTR9-204ENST00000529355 MEGF10Q96KG7 1140 aa7.91□□□□□ -1.14
CTR9-204ENST00000529355 RUSC1Q9BVN2 902 aa7.91□□□□□ -1.14
CTR9-204ENST00000529355 CEP44Q9C0F1 390 aa7.91□□□□□ -1.14
CTR9-204ENST00000529355 CYP11A1P05108 521 aa7.9□□□□□ -1.14
CTR9-204ENST00000529355 ST13P50502 369 aaKnown RBP7.9□□□□□ -1.14
CTR9-204ENST00000529355 TTBK2Q6IQ55 1244 aa7.9□□□□□ -1.14
CTR9-204ENST00000529355 TMEM130Q8N3G9 435 aa7.9□□□□□ -1.14
CTR9-204ENST00000529355 CORO1BQ9BR76 489 aa7.9□□□□□ -1.14
CTR9-204ENST00000529355 TMPRSS13Q9BYE2 586 aa7.9□□□□□ -1.14
CTR9-204ENST00000529355 AKTIPQ9H8T0 292 aa7.9□□□□□ -1.14
CTR9-204ENST00000529355 SCO2A0A1W2PP80 73 aa7.89□□□□□ -1.15
CTR9-204ENST00000529355 TFE3P19532 575 aaPredicted RBP7.89□□□□□ -1.15
CTR9-204ENST00000529355 VAMP1P23763 118 aa7.89□□□□□ -1.15
CTR9-204ENST00000529355 CDK8P49336 464 aa7.89□□□□□ -1.15
CTR9-204ENST00000529355 LIG3P49916 1009 aa7.89□□□□□ -1.15
CTR9-204ENST00000529355 FANCCQ00597 558 aa7.89□□□□□ -1.15
CTR9-204ENST00000529355 AP3B2Q13367 1082 aa7.89□□□□□ -1.15
CTR9-204ENST00000529355 GPBAR1Q8TDU6 330 aa7.89□□□□□ -1.15
CTR9-204ENST00000529355 MINDY4BA8MYZ0 360 aa7.88□□□□□ -1.15
CTR9-204ENST00000529355 GLB1P16278 677 aa7.88□□□□□ -1.15
CTR9-204ENST00000529355 PDE3AQ14432 1141 aa7.88□□□□□ -1.15
CTR9-204ENST00000529355 EXOSC6Q5RKV6 272 aaKnown RBP7.88□□□□□ -1.15
CTR9-204ENST00000529355 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.88□□□□□ -1.15
CTR9-204ENST00000529355 TXNRD3Q86VQ6 643 aa7.88□□□□□ -1.15
CTR9-204ENST00000529355 NACC1Q96RE7 527 aa7.88□□□□□ -1.15
CTR9-204ENST00000529355 WDR18Q9BV38 432 aa7.88□□□□□ -1.15
CTR9-204ENST00000529355 KBTBD4Q9NVX7 518 aa7.88□□□□□ -1.15
CTR9-204ENST00000529355 PPP1R9AQ9ULJ8 1098 aa7.88□□□□□ -1.15
CTR9-204ENST00000529355 SEPT6Q14141 434 aa7.87□□□□□ -1.15
CTR9-204ENST00000529355 AKAP4Q5JQC9 854 aa7.87□□□□□ -1.15
CTR9-204ENST00000529355 ERMP1Q7Z2K6 904 aa7.87□□□□□ -1.15
CTR9-204ENST00000529355 PHC3Q8NDX5 983 aa7.87□□□□□ -1.15
CTR9-204ENST00000529355 DDX54Q8TDD1 881 aaKnown RBP7.87□□□□□ -1.15
CTR9-204ENST00000529355 SSBP4Q9BWG4 385 aaPredicted RBP7.87□□□□□ -1.15
CTR9-204ENST00000529355 GGT7Q9UJ14 662 aa7.87□□□□□ -1.15
CTR9-204ENST00000529355 MEGF11A6BM72 1044 aa7.86□□□□□ -1.15
CTR9-204ENST00000529355 AOC2O75106 756 aa7.86□□□□□ -1.15
CTR9-204ENST00000529355 ITGB7P26010 798 aa7.86□□□□□ -1.15
CTR9-204ENST00000529355 PREPP48147 710 aa7.86□□□□□ -1.15
CTR9-204ENST00000529355 HDLBPQ00341 1268 aaKnown RBP7.86□□□□□ -1.15
CTR9-204ENST00000529355 FAM160A1Q05DH4 1040 aa7.86□□□□□ -1.15
CTR9-204ENST00000529355 ZNF394Q53GI3 561 aa7.86□□□□□ -1.15
CTR9-204ENST00000529355 LLGL2Q6P1M3 1020 aa7.86□□□□□ -1.15
CTR9-204ENST00000529355 Q6ZS46 218 aa7.86□□□□□ -1.15
CTR9-204ENST00000529355 METTL16Q86W50 562 aaKnown RBP7.86□□□□□ -1.15
CTR9-204ENST00000529355 C12orf50Q8NA57 414 aaPredicted RBP7.86□□□□□ -1.15
CTR9-204ENST00000529355 GAL3ST3Q96A11 431 aa7.86□□□□□ -1.15
CTR9-204ENST00000529355 NOC4LQ9BVI4 516 aaKnown RBP7.86□□□□□ -1.15
CTR9-204ENST00000529355 RNF208Q9H0X6 261 aa7.86□□□□□ -1.15
CTR9-204ENST00000529355 SEMA6BQ9H3T3 888 aa7.86□□□□□ -1.15
CTR9-204ENST00000529355 CACNA2D2Q9NY47 1150 aa7.86□□□□□ -1.15
CTR9-204ENST00000529355 PCDHGB7Q9Y5F8 929 aa7.86□□□□□ -1.15
CTR9-204ENST00000529355 CSADQ9Y600 493 aa7.86□□□□□ -1.15
CTR9-204ENST00000529355 PF4P02776 101 aa7.85□□□□□ -1.15
CTR9-204ENST00000529355 GATA4P43694 442 aa7.85□□□□□ -1.15
CTR9-204ENST00000529355 DOC2BQ14184 412 aa7.85□□□□□ -1.15
CTR9-204ENST00000529355 INPP5AQ14642 412 aa7.85□□□□□ -1.15
CTR9-204ENST00000529355 NUTM2GQ5VZR2 741 aa7.85□□□□□ -1.15
CTR9-204ENST00000529355 AGMOQ6ZNB7 445 aa7.85□□□□□ -1.15
CTR9-204ENST00000529355 TPSG1Q9NRR2 321 aa7.85□□□□□ -1.15
CTR9-204ENST00000529355 PCDHGC5Q9Y5F6 944 aa7.85□□□□□ -1.15
CTR9-204ENST00000529355 TIAF1O95411 115 aa7.84□□□□□ -1.15
CTR9-204ENST00000529355 GBP2P32456 591 aaPredicted RBP7.84□□□□□ -1.15
CTR9-204ENST00000529355 ZNF76P36508 570 aa7.84□□□□□ -1.15
CTR9-204ENST00000529355 RACK1P63244 317 aaKnown RBP7.84□□□□□ -1.15
CTR9-204ENST00000529355 BNC2Q6ZN30 1099 aaPredicted RBP7.84□□□□□ -1.15
CTR9-204ENST00000529355 DZIP1LQ8IYY4 767 aaKnown RBP7.84□□□□□ -1.15
CTR9-204ENST00000529355 ARMC10Q8N2F6 343 aa7.84□□□□□ -1.15
CTR9-204ENST00000529355 SMG8Q8ND04 991 aaKnown RBP7.84□□□□□ -1.15
CTR9-204ENST00000529355 JARID2Q92833 1246 aaPredicted RBP7.84□□□□□ -1.15
CTR9-204ENST00000529355 RSRP1Q9BUV0 290 aa7.84□□□□□ -1.15
CTR9-204ENST00000529355 RAD18Q9NS91 495 aa7.84□□□□□ -1.15
CTR9-204ENST00000529355 ADH5P11766 374 aa7.83□□□□□ -1.16
CTR9-204ENST00000529355 GARTP22102 1010 aa7.83□□□□□ -1.16
CTR9-204ENST00000529355 SOX4Q06945 474 aaPredicted RBP7.83□□□□□ -1.16
CTR9-204ENST00000529355 KIF4BQ2VIQ3 1234 aa7.83□□□□□ -1.16
CTR9-204ENST00000529355 NBPF11Q86T75 865 aa7.83□□□□□ -1.16
CTR9-204ENST00000529355 DCAF11Q8TEB1 546 aa7.83□□□□□ -1.16
CTR9-204ENST00000529355 FAM46AQ96IP4 442 aaKnown RBP7.83□□□□□ -1.16
CTR9-204ENST00000529355 TMEM74Q96NL1 305 aa7.83□□□□□ -1.16
CTR9-204ENST00000529355 EMILIN2Q9BXX0 1053 aa7.83□□□□□ -1.16
CTR9-204ENST00000529355 CYP8B1Q9UNU6 501 aa7.83□□□□□ -1.16
CTR9-204ENST00000529355 DCDC2CA8MYV0 355 aa7.82□□□□□ -1.16
CTR9-204ENST00000529355 SCAMP3O14828 347 aaKnown RBP7.82□□□□□ -1.16
CTR9-204ENST00000529355 TMPRSS2O15393 492 aa7.82□□□□□ -1.16
CTR9-204ENST00000529355 CAMK2GQ13555 558 aaPredicted RBP7.82□□□□□ -1.16
CTR9-204ENST00000529355 LCE1DQ5T752 114 aa7.82□□□□□ -1.16
CTR9-204ENST00000529355 FDX2Q6P4F2 183 aa7.82□□□□□ -1.16
CTR9-204ENST00000529355 C12orf40Q86WS4 652 aa7.82□□□□□ -1.16
CTR9-204ENST00000529355 RELL1Q8IUW5 271 aa7.82□□□□□ -1.16
CTR9-204ENST00000529355 C2CD4AQ8NCU7 369 aaPredicted RBP7.82□□□□□ -1.16
CTR9-204ENST00000529355 RNF34Q969K3 372 aa7.82□□□□□ -1.16
CTR9-204ENST00000529355 TP53INP1Q96A56 240 aa7.82□□□□□ -1.16
CTR9-204ENST00000529355 ACSBG1Q96GR2 724 aa7.82□□□□□ -1.16
CTR9-204ENST00000529355 RHOVQ96L33 236 aa7.82□□□□□ -1.16
CTR9-204ENST00000529355 SUGCTQ9HAC7 445 aa7.82□□□□□ -1.16
CTR9-204ENST00000529355 ZFP64Q9NPA5 681 aa7.82□□□□□ -1.16
CTR9-204ENST00000529355 ADAMTS1Q9UHI8 967 aa7.82□□□□□ -1.16
CTR9-204ENST00000529355 PCDHA4Q9UN74 947 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms