RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 NFIAQ12857 509 aa15.68■□□□□ 0.1
SCN3B-205ENST00000528267 SPTY2D1Q68D10 685 aaPredicted RBP15.68■□□□□ 0.1
SCN3B-205ENST00000528267 KRT26Q7Z3Y9 468 aa15.68■□□□□ 0.1
SCN3B-205ENST00000528267 AK9Q5TCS8 1911 aa15.67■□□□□ 0.1
SCN3B-205ENST00000528267 GPR75-ASB3A0A0A6YYF3 556 aa15.67■□□□□ 0.1
SCN3B-205ENST00000528267 TCRBV5S4A2TA0A5A2 114 aa15.67■□□□□ 0.1
SCN3B-205ENST00000528267 IDH1O75874 414 aaKnown RBP15.67■□□□□ 0.1
SCN3B-205ENST00000528267 BTDP43251 543 aa15.67■□□□□ 0.1
SCN3B-205ENST00000528267 CST9Q5W186 159 aa15.67■□□□□ 0.1
SCN3B-205ENST00000528267 CDC37L1Q7L3B6 337 aa15.67■□□□□ 0.1
SCN3B-205ENST00000528267 MAGEB6Q8N7X4 407 aa15.67■□□□□ 0.1
SCN3B-205ENST00000528267 DCPSQ96C86 337 aaKnown RBP15.67■□□□□ 0.1
SCN3B-205ENST00000528267 VEZTQ9HBM0 779 aa15.67■□□□□ 0.1
SCN3B-205ENST00000528267 OTOFQ9HC10 1997 aa15.67■□□□□ 0.1
SCN3B-205ENST00000528267 PDE6AP16499 860 aa15.66■□□□□ 0.1
SCN3B-205ENST00000528267 DYNLL1P63167 89 aaKnown RBP15.66■□□□□ 0.1
SCN3B-205ENST00000528267 NAA16Q6N069 864 aaPredicted RBP15.66■□□□□ 0.1
SCN3B-205ENST00000528267 CDCA5Q96FF9 252 aa15.66■□□□□ 0.1
SCN3B-205ENST00000528267 DDX4Q9NQI0 724 aaKnown RBP15.66■□□□□ 0.1
SCN3B-205ENST00000528267 TCP10L2B9ZVM9 353 aa15.65■□□□□ 0.1
SCN3B-205ENST00000528267 WDHD1O75717 1129 aaPredicted RBP15.65■□□□□ 0.1
SCN3B-205ENST00000528267 GLRX3O76003 335 aaKnown RBP15.65■□□□□ 0.1
SCN3B-205ENST00000528267 NEFLP07196 543 aa15.65■□□□□ 0.1
SCN3B-205ENST00000528267 APOBEC3FQ8IUX4 373 aaKnown RBP15.65■□□□□ 0.1
SCN3B-205ENST00000528267 ZFPM1Q8IX07 1006 aa15.65■□□□□ 0.1
SCN3B-205ENST00000528267 TEPSINQ96N21 525 aa15.65■□□□□ 0.1
SCN3B-205ENST00000528267 AATFQ9NY61 560 aaKnown RBP eCLIP15.65■□□□□ 0.1
SCN3B-205ENST00000528267 FAM198AQ9UFP1 575 aa15.65■□□□□ 0.1
SCN3B-205ENST00000528267 FZD1Q9UP38 647 aa15.65■□□□□ 0.1
SCN3B-205ENST00000528267 GTF3C3Q9Y5Q9 886 aa15.65■□□□□ 0.1
SCN3B-205ENST00000528267 CYP7A1P22680 504 aa15.64■□□□□ 0.09
SCN3B-205ENST00000528267 ADD2P35612 726 aa15.64■□□□□ 0.09
SCN3B-205ENST00000528267 TTF1Q15361 905 aaPredicted RBP15.64■□□□□ 0.09
SCN3B-205ENST00000528267 SULF1Q8IWU6 871 aa15.64■□□□□ 0.09
SCN3B-205ENST00000528267 MIGA1Q8NAN2 632 aa15.64■□□□□ 0.09
SCN3B-205ENST00000528267 NAV1Q8NEY1 1877 aa15.64■□□□□ 0.09
SCN3B-205ENST00000528267 SH3RF3Q8TEJ3 882 aaPredicted RBP15.64■□□□□ 0.09
SCN3B-205ENST00000528267 GPATCH3Q96I76 525 aa15.64■□□□□ 0.09
SCN3B-205ENST00000528267 TMEM39BQ9GZU3 492 aa15.64■□□□□ 0.09
SCN3B-205ENST00000528267 DEFB129Q9H1M3 183 aa15.64■□□□□ 0.09
SCN3B-205ENST00000528267 OSBPL3Q9H4L5 887 aa15.64■□□□□ 0.09
SCN3B-205ENST00000528267 USP40Q9NVE5 1235 aa15.64■□□□□ 0.09
SCN3B-205ENST00000528267 ZNF532Q9HCE3 1301 aa15.64■□□□□ 0.09
SCN3B-205ENST00000528267 MYO1BO43795 1136 aa15.63■□□□□ 0.09
SCN3B-205ENST00000528267 SLURP2P0DP57 97 aa15.63■□□□□ 0.09
SCN3B-205ENST00000528267 GSPT1P15170 499 aaKnown RBP15.63■□□□□ 0.09
SCN3B-205ENST00000528267 HSPA6P17066 643 aa15.63■□□□□ 0.09
SCN3B-205ENST00000528267 APLP1P51693 650 aa15.63■□□□□ 0.09
SCN3B-205ENST00000528267 RASA3Q14644 834 aa15.63■□□□□ 0.09
SCN3B-205ENST00000528267 SLC9C2Q5TAH2 1124 aa15.63■□□□□ 0.09
SCN3B-205ENST00000528267 CENPQQ7L2Z9 268 aaPredicted RBP15.63■□□□□ 0.09
SCN3B-205ENST00000528267 KBTBD3Q8NAB2 608 aa15.63■□□□□ 0.09
SCN3B-205ENST00000528267 RIOK1Q9BRS2 568 aaKnown RBP15.63■□□□□ 0.09
SCN3B-205ENST00000528267 MYH1P12882 1939 aa15.62■□□□□ 0.09
SCN3B-205ENST00000528267 CEP350Q5VT06 3117 aa15.62■□□□□ 0.09
SCN3B-205ENST00000528267 CELF2O95319 508 aaKnown RBP15.62■□□□□ 0.09
SCN3B-205ENST00000528267 PPP4CP60510 307 aa15.62■□□□□ 0.09
SCN3B-205ENST00000528267 GSTO1P78417 241 aa15.62■□□□□ 0.09
SCN3B-205ENST00000528267 MAP3K12Q12852 859 aa15.62■□□□□ 0.09
SCN3B-205ENST00000528267 NBPF12Q5TAG4 269 aaPredicted RBP15.62■□□□□ 0.09
SCN3B-205ENST00000528267 MOB2Q70IA6 237 aa15.62■□□□□ 0.09
SCN3B-205ENST00000528267 SH3BP5LQ7L8J4 393 aa15.62■□□□□ 0.09
SCN3B-205ENST00000528267 IDI2Q9BXS1 227 aa15.62■□□□□ 0.09
SCN3B-205ENST00000528267 ZNF408Q9H9D4 720 aa15.62■□□□□ 0.09
SCN3B-205ENST00000528267 ATRNL1Q5VV63 1379 aa15.62■□□□□ 0.09
SCN3B-205ENST00000528267 BAZ2AQ9UIF9 1905 aaKnown RBP15.61■□□□□ 0.09
SCN3B-205ENST00000528267 ERC2O15083 957 aa15.61■□□□□ 0.09
SCN3B-205ENST00000528267 IGSF3O75054 1194 aa15.61■□□□□ 0.09
SCN3B-205ENST00000528267 LDHCP07864 332 aa15.61■□□□□ 0.09
SCN3B-205ENST00000528267 RGS3P49796 1198 aa15.61■□□□□ 0.09
SCN3B-205ENST00000528267 TCP10Q12799 353 aa15.61■□□□□ 0.09
SCN3B-205ENST00000528267 CCDC136Q96JN2 1154 aa15.61■□□□□ 0.09
SCN3B-205ENST00000528267 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
SCN3B-205ENST00000528267 RPAP1Q9BWH6 1393 aaPredicted RBP15.61■□□□□ 0.09
SCN3B-205ENST00000528267 FKBP1CQ5VVH2 108 aa15.6■□□□□ 0.09
SCN3B-205ENST00000528267 FAM83AQ86UY5 434 aa15.6■□□□□ 0.09
SCN3B-205ENST00000528267 SLF2Q8IX21 1173 aa15.6■□□□□ 0.09
SCN3B-205ENST00000528267 LCORLQ8N3X6 602 aa15.6■□□□□ 0.09
SCN3B-205ENST00000528267 PUS7LQ9H0K6 701 aaKnown RBP15.6■□□□□ 0.09
SCN3B-205ENST00000528267 DDTLA6NHG4 134 aaPredicted RBP15.59■□□□□ 0.09
SCN3B-205ENST00000528267 PICALMQ13492 652 aa15.59■□□□□ 0.09
SCN3B-205ENST00000528267 UBE3CQ15386 1083 aa15.59■□□□□ 0.09
SCN3B-205ENST00000528267 OSBP2Q969R2 916 aa15.59■□□□□ 0.09
SCN3B-205ENST00000528267 SEC62Q99442 399 aaKnown RBP15.59■□□□□ 0.09
SCN3B-205ENST00000528267 PPP4R2Q9NY27 417 aa15.59■□□□□ 0.09
SCN3B-205ENST00000528267 PPP2R3BQ9Y5P8 575 aa15.59■□□□□ 0.09
SCN3B-205ENST00000528267 TMEM88BA6NKF7 163 aa15.58■□□□□ 0.08
SCN3B-205ENST00000528267 M0R2C6 588 aa15.58■□□□□ 0.08
SCN3B-205ENST00000528267 EVX2Q03828 476 aa15.58■□□□□ 0.08
SCN3B-205ENST00000528267 TNFAIP1Q13829 316 aa15.58■□□□□ 0.08
SCN3B-205ENST00000528267 TTC22Q5TAA0 569 aa15.58■□□□□ 0.08
SCN3B-205ENST00000528267 ERICH6BQ5W0A0 696 aa15.58■□□□□ 0.08
SCN3B-205ENST00000528267 TEX11Q8IYF3 940 aa15.58■□□□□ 0.08
SCN3B-205ENST00000528267 FAM151AQ8WW52 585 aa15.58■□□□□ 0.08
SCN3B-205ENST00000528267 ARMT1Q9H993 441 aa15.58■□□□□ 0.08
SCN3B-205ENST00000528267 GBA2Q9HCG7 927 aaPredicted RBP15.58■□□□□ 0.08
SCN3B-205ENST00000528267 CREBZFQ9NS37 354 aa15.58■□□□□ 0.08
SCN3B-205ENST00000528267 FLT1P17948 1338 aa15.58■□□□□ 0.08
SCN3B-205ENST00000528267 COL2A1P02458 1487 aaPredicted RBP15.58■□□□□ 0.08
SCN3B-205ENST00000528267 MAGEB6P1A0A0J9YX57 407 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms