RNA–Protein interactions for RNA: ENST00000527836.5

SCN3B-204, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-204ENST00000527836 VGLL4Q14135 290 aa15.32■□□□□ 0.04
SCN3B-204ENST00000527836 NOM1Q5C9Z4 860 aaKnown RBP15.32■□□□□ 0.04
SCN3B-204ENST00000527836 SPTY2D1Q68D10 685 aaPredicted RBP15.32■□□□□ 0.04
SCN3B-204ENST00000527836 SLF2Q8IX21 1173 aa15.32■□□□□ 0.04
SCN3B-204ENST00000527836 TMEM57Q8N5G2 664 aa15.32■□□□□ 0.04
SCN3B-204ENST00000527836 OTUD5Q96G74 571 aa15.32■□□□□ 0.04
SCN3B-204ENST00000527836 XAGE2Q96GT9 111 aa15.32■□□□□ 0.04
SCN3B-204ENST00000527836 WRNIP1Q96S55 665 aa15.32■□□□□ 0.04
SCN3B-204ENST00000527836 USP40Q9NVE5 1235 aa15.32■□□□□ 0.04
SCN3B-204ENST00000527836 DAGLAQ9Y4D2 1042 aa15.32■□□□□ 0.04
SCN3B-204ENST00000527836 WDHD1O75717 1129 aaPredicted RBP15.31■□□□□ 0.04
SCN3B-204ENST00000527836 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.31■□□□□ 0.04
SCN3B-204ENST00000527836 ITPRIPQ8IWB1 547 aa15.31■□□□□ 0.04
SCN3B-204ENST00000527836 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.31■□□□□ 0.04
SCN3B-204ENST00000527836 CFHR5Q9BXR6 569 aa15.31■□□□□ 0.04
SCN3B-204ENST00000527836 SALL1Q9NSC2 1324 aa15.31■□□□□ 0.04
SCN3B-204ENST00000527836 IGF2BP3O00425 579 aaKnown RBP eCLIP15.3■□□□□ 0.04
SCN3B-204ENST00000527836 GJA5P36382 358 aa15.3■□□□□ 0.04
SCN3B-204ENST00000527836 GTF2A2P52657 109 aa15.3■□□□□ 0.04
SCN3B-204ENST00000527836 RASGRF1Q13972 1273 aa15.3■□□□□ 0.04
SCN3B-204ENST00000527836 CDC42EP5Q6NZY7 148 aa15.3■□□□□ 0.04
SCN3B-204ENST00000527836 MIGA2Q7L4E1 593 aa15.3■□□□□ 0.04
SCN3B-204ENST00000527836 FAM151AQ8WW52 585 aa15.3■□□□□ 0.04
SCN3B-204ENST00000527836 ZNF341Q9BYN7 854 aa15.3■□□□□ 0.04
SCN3B-204ENST00000527836 LAMB1P07942 1786 aa15.29■□□□□ 0.04
SCN3B-204ENST00000527836 CCL15-CCL14A0A0B4J2E2 113 aa15.29■□□□□ 0.04
SCN3B-204ENST00000527836 PNMA6EA0A0J9YXQ4 647 aa15.29■□□□□ 0.04
SCN3B-204ENST00000527836 CCL15Q16663 113 aa15.29■□□□□ 0.04
SCN3B-204ENST00000527836 ERICH6Q7L0X2 663 aa15.29■□□□□ 0.04
SCN3B-204ENST00000527836 ZSCAN29Q8IWY8 852 aaPredicted RBP15.29■□□□□ 0.04
SCN3B-204ENST00000527836 CNKSR2Q8WXI2 1034 aa15.29■□□□□ 0.04
SCN3B-204ENST00000527836 ZKSCAN4Q969J2 545 aaPredicted RBP15.29■□□□□ 0.04
SCN3B-204ENST00000527836 R3HDMLQ9H3Y0 253 aa15.29■□□□□ 0.04
SCN3B-204ENST00000527836 RPAP1Q9BWH6 1393 aaPredicted RBP15.28■□□□□ 0.04
SCN3B-204ENST00000527836 SOX10P56693 466 aa15.28■□□□□ 0.04
SCN3B-204ENST00000527836 CRHR2Q13324 411 aa15.28■□□□□ 0.04
SCN3B-204ENST00000527836 ERO1BQ86YB8 467 aa15.28■□□□□ 0.04
SCN3B-204ENST00000527836 ERO1AQ96HE7 468 aa15.28■□□□□ 0.04
SCN3B-204ENST00000527836 HPS5Q9UPZ3 1129 aa15.28■□□□□ 0.04
SCN3B-204ENST00000527836 PDS5AQ29RF7 1337 aaKnown RBP15.27■□□□□ 0.04
SCN3B-204ENST00000527836 ZBED9Q6R2W3 1325 aa15.27■□□□□ 0.04
SCN3B-204ENST00000527836 SPDYE5A6NIY4 337 aa15.27■□□□□ 0.04
SCN3B-204ENST00000527836 TAF1CQ15572 869 aaPredicted RBP15.27■□□□□ 0.04
SCN3B-204ENST00000527836 FBXO46Q6PJ61 603 aaPredicted RBP15.27■□□□□ 0.04
SCN3B-204ENST00000527836 ZFYVE28Q9HCC9 887 aa15.27■□□□□ 0.04
SCN3B-204ENST00000527836 TRIM17Q9Y577 477 aa15.27■□□□□ 0.04
SCN3B-204ENST00000527836 TESPA1A2RU30 521 aaPredicted RBP15.26■□□□□ 0.03
SCN3B-204ENST00000527836 SURF6O75683 361 aaKnown RBP15.26■□□□□ 0.03
SCN3B-204ENST00000527836 UQCRFS1P1P0C7P4 283 aa15.26■□□□□ 0.03
SCN3B-204ENST00000527836 CETPP11597 493 aa15.26■□□□□ 0.03
SCN3B-204ENST00000527836 RGS19P49795 217 aa15.26■□□□□ 0.03
SCN3B-204ENST00000527836 GSTO1P78417 241 aa15.26■□□□□ 0.03
SCN3B-204ENST00000527836 NFIAQ12857 509 aa15.26■□□□□ 0.03
SCN3B-204ENST00000527836 SNAPC2Q13487 334 aa15.26■□□□□ 0.03
SCN3B-204ENST00000527836 SPATA5Q8NB90 893 aa15.26■□□□□ 0.03
SCN3B-204ENST00000527836 MS4A4AQ96JQ5 239 aa15.26■□□□□ 0.03
SCN3B-204ENST00000527836 PTPN18Q99952 460 aa15.26■□□□□ 0.03
SCN3B-204ENST00000527836 C1orf115Q9H7X2 142 aa15.26■□□□□ 0.03
SCN3B-204ENST00000527836 RAI14Q9P0K7 980 aa15.26■□□□□ 0.03
SCN3B-204ENST00000527836 SNCAIPQ9Y6H5 919 aa15.26■□□□□ 0.03
SCN3B-204ENST00000527836 LDHCP07864 332 aa15.25■□□□□ 0.03
SCN3B-204ENST00000527836 BTDP43251 543 aa15.25■□□□□ 0.03
SCN3B-204ENST00000527836 RGS3P49796 1198 aa15.25■□□□□ 0.03
SCN3B-204ENST00000527836 ATP8B2P98198 1209 aa15.25■□□□□ 0.03
SCN3B-204ENST00000527836 SP3Q02447 781 aa15.25■□□□□ 0.03
SCN3B-204ENST00000527836 PICALMQ13492 652 aa15.25■□□□□ 0.03
SCN3B-204ENST00000527836 ARHGEF6Q15052 776 aa15.25■□□□□ 0.03
SCN3B-204ENST00000527836 CCDC158Q5M9N0 1113 aa15.25■□□□□ 0.03
SCN3B-204ENST00000527836 TTC39AQ5SRH9 613 aa15.25■□□□□ 0.03
SCN3B-204ENST00000527836 BRI3BPQ8WY22 251 aa15.25■□□□□ 0.03
SCN3B-204ENST00000527836 NOL10Q9BSC4 688 aaKnown RBP15.25■□□□□ 0.03
SCN3B-204ENST00000527836 LRP2BPQ9P2M1 347 aa15.25■□□□□ 0.03
SCN3B-204ENST00000527836 DOCK2Q92608 1830 aa15.24■□□□□ 0.03
SCN3B-204ENST00000527836 GAKO14976 1311 aa15.24■□□□□ 0.03
SCN3B-204ENST00000527836 IRF6O14896 467 aa15.24■□□□□ 0.03
SCN3B-204ENST00000527836 ZBTB22O15209 634 aa15.24■□□□□ 0.03
SCN3B-204ENST00000527836 ENTPD3O75355 529 aa15.24■□□□□ 0.03
SCN3B-204ENST00000527836 INPP5BP32019 993 aa15.24■□□□□ 0.03
SCN3B-204ENST00000527836 MECOMQ03112 1051 aa15.24■□□□□ 0.03
SCN3B-204ENST00000527836 PPIL2Q13356 520 aa15.24■□□□□ 0.03
SCN3B-204ENST00000527836 CD99L2Q8TCZ2 262 aa15.24■□□□□ 0.03
SCN3B-204ENST00000527836 HMG20BQ9P0W2 317 aa15.24■□□□□ 0.03
SCN3B-204ENST00000527836 FAM198AQ9UFP1 575 aa15.24■□□□□ 0.03
SCN3B-204ENST00000527836 MROH7-TTC4A0A0A0MT08 1334 aa15.23■□□□□ 0.03
SCN3B-204ENST00000527836 MS4A1P11836 297 aa15.23■□□□□ 0.03
SCN3B-204ENST00000527836 PPATQ06203 517 aa15.23■□□□□ 0.03
SCN3B-204ENST00000527836 TBC1D9Q6ZT07 1266 aa15.23■□□□□ 0.03
SCN3B-204ENST00000527836 SSH3Q8TE77 659 aa15.23■□□□□ 0.03
SCN3B-204ENST00000527836 EFCC1Q9HA90 598 aa15.23■□□□□ 0.03
SCN3B-204ENST00000527836 PICK1Q9NRD5 415 aa15.23■□□□□ 0.03
SCN3B-204ENST00000527836 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.23■□□□□ 0.03
SCN3B-204ENST00000527836 ARID4AP29374 1257 aaPredicted RBP15.22■□□□□ 0.03
SCN3B-204ENST00000527836 POLA2Q14181 598 aa15.22■□□□□ 0.03
SCN3B-204ENST00000527836 KIF22Q14807 665 aa15.22■□□□□ 0.03
SCN3B-204ENST00000527836 TNNI3KQ59H18 835 aa15.22■□□□□ 0.03
SCN3B-204ENST00000527836 PI16Q6UXB8 463 aa15.22■□□□□ 0.03
SCN3B-204ENST00000527836 OTOP1Q7RTM1 612 aa15.22■□□□□ 0.03
SCN3B-204ENST00000527836 ZFPM1Q8IX07 1006 aa15.22■□□□□ 0.03
SCN3B-204ENST00000527836 FAM43AQ8N2R8 423 aa15.22■□□□□ 0.03
SCN3B-204ENST00000527836 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms