RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ARPP21Q9UBL0 812 aaPredicted RBP17.31■□□□□ 0.36
USP47-207ENST00000527733 USP17L12C9JPN9 530 aa17.3■□□□□ 0.36
USP47-207ENST00000527733 USP17L21D6R901 530 aa17.3■□□□□ 0.36
USP47-207ENST00000527733 BARGINQ6ZT62 677 aa17.3■□□□□ 0.36
USP47-207ENST00000527733 FILIP1Q7Z7B0 1213 aa17.3■□□□□ 0.36
USP47-207ENST00000527733 IFNL3Q8IZI9 196 aa17.3■□□□□ 0.36
USP47-207ENST00000527733 SH2D4AQ9H788 454 aa17.3■□□□□ 0.36
USP47-207ENST00000527733 ITSN1Q15811 1721 aa17.3■□□□□ 0.36
USP47-207ENST00000527733 A0A0U1RQG5 324 aaPredicted RBP17.3■□□□□ 0.36
USP47-207ENST00000527733 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
USP47-207ENST00000527733 CCP110O43303 1012 aa17.3■□□□□ 0.36
USP47-207ENST00000527733 CT47A1Q5JQC4 288 aaPredicted RBP17.3■□□□□ 0.36
USP47-207ENST00000527733 MRPS27Q92552 414 aaKnown RBP17.3■□□□□ 0.36
USP47-207ENST00000527733 CD163L1Q9NR16 1453 aa17.3■□□□□ 0.36
USP47-207ENST00000527733 PPP2R5BQ15173 497 aa17.3■□□□□ 0.36
USP47-207ENST00000527733 MARCH10Q8NA82 808 aaPredicted RBP17.3■□□□□ 0.36
USP47-207ENST00000527733 ADCY9O60503 1353 aa17.3■□□□□ 0.36
USP47-207ENST00000527733 DLGAP5Q15398 846 aa17.29■□□□□ 0.36
USP47-207ENST00000527733 SLC27A3Q5K4L6 730 aa17.29■□□□□ 0.36
USP47-207ENST00000527733 SPTLC2O15270 562 aa17.29■□□□□ 0.36
USP47-207ENST00000527733 KIF20AO95235 890 aa17.29■□□□□ 0.36
USP47-207ENST00000527733 KRT2P35908 639 aa17.29■□□□□ 0.36
USP47-207ENST00000527733 PPARAQ07869 468 aa17.29■□□□□ 0.36
USP47-207ENST00000527733 ZMYM1Q5SVZ6 1142 aa17.29■□□□□ 0.36
USP47-207ENST00000527733 ATP10DQ9P241 1426 aa17.29■□□□□ 0.36
USP47-207ENST00000527733 BCS1LQ9Y276 419 aa17.29■□□□□ 0.36
USP47-207ENST00000527733 CDHR2Q9BYE9 1310 aa17.29■□□□□ 0.36
USP47-207ENST00000527733 NCOA5Q9HCD5 579 aaKnown RBP17.29■□□□□ 0.36
USP47-207ENST00000527733 SPATA31A5Q5VU36 1347 aa17.29■□□□□ 0.36
USP47-207ENST00000527733 SPATA31A7Q8IWB4 1347 aa17.29■□□□□ 0.36
USP47-207ENST00000527733 USP40Q9NVE5 1235 aa17.29■□□□□ 0.36
USP47-207ENST00000527733 CEMIPQ8WUJ3 1361 aa17.29■□□□□ 0.36
USP47-207ENST00000527733 DEXIO95424 95 aa17.28■□□□□ 0.36
USP47-207ENST00000527733 FGAP02671 866 aa17.28■□□□□ 0.36
USP47-207ENST00000527733 DOK7Q18PE1 504 aa17.28■□□□□ 0.36
USP47-207ENST00000527733 SMARCC2Q8TAQ2 1214 aa17.28■□□□□ 0.36
USP47-207ENST00000527733 CAVIN2O95810 425 aa17.28■□□□□ 0.36
USP47-207ENST00000527733 BSDC1Q9NW68 430 aaPredicted RBP17.28■□□□□ 0.36
USP47-207ENST00000527733 BIN1O00499 593 aa17.28■□□□□ 0.36
USP47-207ENST00000527733 MMP10P09238 476 aa17.28■□□□□ 0.36
USP47-207ENST00000527733 IDEP14735 1019 aa17.28■□□□□ 0.36
USP47-207ENST00000527733 MARCKSP29966 332 aaPredicted RBP17.28■□□□□ 0.36
USP47-207ENST00000527733 PAXIP1Q6ZW49 1069 aaPredicted RBP17.28■□□□□ 0.36
USP47-207ENST00000527733 MAP4K1Q92918 833 aa17.28■□□□□ 0.36
USP47-207ENST00000527733 GRAPQ13588 217 aa17.28■□□□□ 0.36
USP47-207ENST00000527733 STX1AQ16623 288 aa17.28■□□□□ 0.36
USP47-207ENST00000527733 GRAPLQ8TC17 118 aaPredicted RBP17.28■□□□□ 0.36
USP47-207ENST00000527733 SYCP1Q15431 976 aa17.27■□□□□ 0.36
USP47-207ENST00000527733 PALD1Q9ULE6 856 aa17.27■□□□□ 0.36
USP47-207ENST00000527733 PPP1R12BO60237 982 aaPredicted RBP17.27■□□□□ 0.36
USP47-207ENST00000527733 TFAP4Q01664 338 aa17.27■□□□□ 0.36
USP47-207ENST00000527733 NKX1-1Q15270 411 aaPredicted RBP17.27■□□□□ 0.36
USP47-207ENST00000527733 ATL3Q6DD88 541 aa17.27■□□□□ 0.36
USP47-207ENST00000527733 ARHGEF1Q92888 912 aaKnown RBP17.27■□□□□ 0.36
USP47-207ENST00000527733 TCP10Q12799 353 aa17.26■□□□□ 0.35
USP47-207ENST00000527733 ERMNQ8TAM6 284 aa17.26■□□□□ 0.35
USP47-207ENST00000527733 SDR42E1Q8WUS8 393 aa17.26■□□□□ 0.35
USP47-207ENST00000527733 TSG101Q99816 390 aa17.26■□□□□ 0.35
USP47-207ENST00000527733 SPDYE3A6NKU9 549 aa17.26■□□□□ 0.35
USP47-207ENST00000527733 ZNF165P49910 485 aa17.26■□□□□ 0.35
USP47-207ENST00000527733 EIF5P55010 431 aaKnown RBP17.26■□□□□ 0.35
USP47-207ENST00000527733 LRRC27Q9C0I9 530 aa17.26■□□□□ 0.35
USP47-207ENST00000527733 MNS1Q8NEH6 495 aa17.26■□□□□ 0.35
USP47-207ENST00000527733 LSG1Q9H089 658 aaKnown RBP17.26■□□□□ 0.35
USP47-207ENST00000527733 ANTXR1Q9H6X2 564 aa17.26■□□□□ 0.35
USP47-207ENST00000527733 ARHGEF10LQ9HCE6 1279 aa17.26■□□□□ 0.35
USP47-207ENST00000527733 LUC7LQ9NQ29 371 aaKnown RBP17.26■□□□□ 0.35
USP47-207ENST00000527733 TXNRD1Q16881 649 aa17.26■□□□□ 0.35
USP47-207ENST00000527733 KIAA0825Q8IV33 1275 aa17.26■□□□□ 0.35
USP47-207ENST00000527733 DACT1Q9NYF0 836 aa17.26■□□□□ 0.35
USP47-207ENST00000527733 V9GY48 417 aaPredicted RBP17.26■□□□□ 0.35
USP47-207ENST00000527733 SYNE4Q8N205 404 aa17.25■□□□□ 0.35
USP47-207ENST00000527733 ZSWIM6Q9HCJ5 1215 aa17.25■□□□□ 0.35
USP47-207ENST00000527733 FGFR1OPO95684 399 aaKnown RBP17.25■□□□□ 0.35
USP47-207ENST00000527733 MPHOSPH6Q99547 160 aaKnown RBP17.25■□□□□ 0.35
USP47-207ENST00000527733 DEF6Q9H4E7 631 aa17.25■□□□□ 0.35
USP47-207ENST00000527733 BRPF3Q9ULD4 1205 aa17.25■□□□□ 0.35
USP47-207ENST00000527733 SAMM50Q9Y512 469 aa17.25■□□□□ 0.35
USP47-207ENST00000527733 NPR1P16066 1061 aa17.24■□□□□ 0.35
USP47-207ENST00000527733 HOOK2Q96ED9 719 aa17.24■□□□□ 0.35
USP47-207ENST00000527733 UBA5Q9GZZ9 404 aa17.24■□□□□ 0.35
USP47-207ENST00000527733 IQSEC2Q5JU85 1478 aa17.24■□□□□ 0.35
USP47-207ENST00000527733 GIMAP6Q6P9H5 292 aa17.24■□□□□ 0.35
USP47-207ENST00000527733 PI4K2BQ8TCG2 481 aa17.24■□□□□ 0.35
USP47-207ENST00000527733 MYL10Q9BUA6 226 aa17.24■□□□□ 0.35
USP47-207ENST00000527733 GPCPD1Q9NPB8 672 aa17.24■□□□□ 0.35
USP47-207ENST00000527733 PPP4R3AQ6IN85 833 aa17.24■□□□□ 0.35
USP47-207ENST00000527733 PI16Q6UXB8 463 aa17.24■□□□□ 0.35
USP47-207ENST00000527733 MRPL12P52815 198 aaKnown RBP17.24■□□□□ 0.35
USP47-207ENST00000527733 TBC1D9BQ66K14 1250 aa17.24■□□□□ 0.35
USP47-207ENST00000527733 BTDP43251 543 aa17.23■□□□□ 0.35
USP47-207ENST00000527733 ZSCAN23Q3MJ62 389 aa17.23■□□□□ 0.35
USP47-207ENST00000527733 ATP8A2Q9NTI2 1148 aa17.23■□□□□ 0.35
USP47-207ENST00000527733 ADD2P35612 726 aa17.23■□□□□ 0.35
USP47-207ENST00000527733 ODF2Q5BJF6 829 aa17.23■□□□□ 0.35
USP47-207ENST00000527733 RILPL1Q5EBL4 403 aa17.23■□□□□ 0.35
USP47-207ENST00000527733 PDCL3Q9H2J4 239 aa17.23■□□□□ 0.35
USP47-207ENST00000527733 CC2D2BQ6DHV5 1058 aa17.23■□□□□ 0.35
USP47-207ENST00000527733 ZNF274Q96GC6 653 aaPredicted RBP17.23■□□□□ 0.35
USP47-207ENST00000527733 SCNN1DP51172 638 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms