RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 TEFQ10587 303 aa7.48□□□□□ -1.21
LINC01001-202ENST00000527683 SLFNL1Q499Z3 407 aa7.48□□□□□ -1.21
LINC01001-202ENST00000527683 PRPF40BQ6NWY9 871 aaKnown RBP7.48□□□□□ -1.21
LINC01001-202ENST00000527683 CLEC4GQ6UXB4 293 aa7.48□□□□□ -1.21
LINC01001-202ENST00000527683 CNBD1Q8NA66 436 aa7.48□□□□□ -1.21
LINC01001-202ENST00000527683 IRF7Q92985 503 aa7.48□□□□□ -1.21
LINC01001-202ENST00000527683 FMNL2Q96PY5 1086 aa7.48□□□□□ -1.21
LINC01001-202ENST00000527683 UCN2Q96RP3 112 aa7.48□□□□□ -1.21
LINC01001-202ENST00000527683 TAF1DQ9H5J8 278 aaPredicted RBP7.48□□□□□ -1.21
LINC01001-202ENST00000527683 DOLKQ9UPQ8 538 aa7.48□□□□□ -1.21
LINC01001-202ENST00000527683 ZNF831Q5JPB2 1677 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 PRAMEF22A3QJZ6 481 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 E9PSI1 815 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 APAF1O14727 1248 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 SCNN1DP51172 638 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 POU4F2Q12837 409 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 CCDC27Q2M243 656 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 OXLD1Q5BKU9 147 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 SOGA3Q5TF21 947 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 OLFM4Q6UX06 510 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 LYSMD3Q7Z3D4 306 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 CYP2U1Q7Z449 544 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 LDHDQ86WU2 507 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 PLPP7Q8NBV4 271 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 GAS2L2Q8NHY3 880 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 XAGE2Q96GT9 111 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 ETNK1Q9HBU6 452 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 PRDM10Q9NQV6 1147 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 PPP4R2Q9NY27 417 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 RCAN3Q9UKA8 241 aa7.47□□□□□ -1.21
LINC01001-202ENST00000527683 DLG5Q8TDM6 1919 aa7.46□□□□□ -1.21
LINC01001-202ENST00000527683 IQCA1LA6NCM1 817 aa7.46□□□□□ -1.22
LINC01001-202ENST00000527683 TMEM88BA6NKF7 163 aa7.46□□□□□ -1.22
LINC01001-202ENST00000527683 BTBD11A6QL63 1104 aa7.46□□□□□ -1.22
LINC01001-202ENST00000527683 FZD9O00144 591 aa7.46□□□□□ -1.22
LINC01001-202ENST00000527683 U2SURPO15042 1029 aaKnown RBP7.46□□□□□ -1.22
LINC01001-202ENST00000527683 NPR1P16066 1061 aa7.46□□□□□ -1.22
LINC01001-202ENST00000527683 ITGA6P23229 1130 aa7.46□□□□□ -1.22
LINC01001-202ENST00000527683 PIP4K2AP48426 406 aaPredicted RBP7.46□□□□□ -1.22
LINC01001-202ENST00000527683 RRP1P56182 461 aaKnown RBP7.46□□□□□ -1.22
LINC01001-202ENST00000527683 ST5P78524 1137 aa7.46□□□□□ -1.22
LINC01001-202ENST00000527683 SEMA3FQ13275 785 aa7.46□□□□□ -1.22
LINC01001-202ENST00000527683 RNFT1Q5M7Z0 435 aa7.46□□□□□ -1.22
LINC01001-202ENST00000527683 NBPF10Q6P3W6 841 aaKnown RBP7.46□□□□□ -1.22
LINC01001-202ENST00000527683 TPTE2Q6XPS3 522 aa7.46□□□□□ -1.22
LINC01001-202ENST00000527683 NPM2Q86SE8 214 aaKnown RBP7.46□□□□□ -1.22
LINC01001-202ENST00000527683 CCDC146Q8IYE0 955 aa7.46□□□□□ -1.22
LINC01001-202ENST00000527683 NBPF15Q8N660 670 aa7.46□□□□□ -1.22
LINC01001-202ENST00000527683 NANOS1Q8WY41 292 aaKnown RBP7.46□□□□□ -1.22
LINC01001-202ENST00000527683 ZNF277Q9NRM2 450 aaPredicted RBP7.46□□□□□ -1.22
LINC01001-202ENST00000527683 MAPK8IP3Q9UPT6 1336 aa7.46□□□□□ -1.22
LINC01001-202ENST00000527683 CNTNAP1P78357 1384 aa7.46□□□□□ -1.22
LINC01001-202ENST00000527683 NPHP1O15259 732 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 GNRH1P01148 92 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 THBS1P07996 1170 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 SNRPA1P09661 255 aaKnown RBP7.45□□□□□ -1.22
LINC01001-202ENST00000527683 U2AF1L5P0DN76 240 aaPredicted RBP7.45□□□□□ -1.22
LINC01001-202ENST00000527683 EPHX2P34913 555 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 GPC1P35052 558 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 CTCFP49711 727 aaPredicted RBP7.45□□□□□ -1.22
LINC01001-202ENST00000527683 U2AF1Q01081 240 aaKnown RBP eCLIP7.45□□□□□ -1.22
LINC01001-202ENST00000527683 FKBP4Q02790 459 aaKnown RBP eCLIP7.45□□□□□ -1.22
LINC01001-202ENST00000527683 CENPCQ03188 943 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 SLFN5Q08AF3 891 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 CCDC93Q567U6 631 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 DUSP27Q5VZP5 1158 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 NBPF5PQ86XG9 351 aaPredicted RBP7.45□□□□□ -1.22
LINC01001-202ENST00000527683 WDR63Q8IWG1 891 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 TRMT2AQ8IZ69 625 aaKnown RBP7.45□□□□□ -1.22
LINC01001-202ENST00000527683 RTKN2Q8IZC4 609 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 CNTROBQ8N137 903 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 SYNE4Q8N205 404 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 VWA5B2Q8N398 1253 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 ZNF592Q92610 1267 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 ESYT1Q9BSJ8 1104 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 HACL1Q9UJ83 578 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 PCDHGA11Q9Y5H2 935 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 CEMIPQ8WUJ3 1361 aa7.45□□□□□ -1.22
LINC01001-202ENST00000527683 ADAMTS7Q9UKP4 1686 aa7.44□□□□□ -1.22
LINC01001-202ENST00000527683 NEFMP07197 916 aa7.44□□□□□ -1.22
LINC01001-202ENST00000527683 LBX1P52954 281 aa7.44□□□□□ -1.22
LINC01001-202ENST00000527683 HLFQ16534 295 aa7.44□□□□□ -1.22
LINC01001-202ENST00000527683 DEFB115Q30KQ5 88 aa7.44□□□□□ -1.22
LINC01001-202ENST00000527683 EAPPQ56P03 285 aaPredicted RBP7.44□□□□□ -1.22
LINC01001-202ENST00000527683 MAP1SQ66K74 1059 aaPredicted RBP7.44□□□□□ -1.22
LINC01001-202ENST00000527683 PNMA8AQ86V59 439 aaPredicted RBP7.44□□□□□ -1.22
LINC01001-202ENST00000527683 WWC1Q8IX03 1113 aa7.44□□□□□ -1.22
LINC01001-202ENST00000527683 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.44□□□□□ -1.22
LINC01001-202ENST00000527683 NIP7Q9Y221 180 aaKnown RBP eCLIP7.44□□□□□ -1.22
LINC01001-202ENST00000527683 ZNF541Q9H0D2 1346 aa7.44□□□□□ -1.22
LINC01001-202ENST00000527683 COL5A3P25940 1745 aaPredicted RBP7.44□□□□□ -1.22
LINC01001-202ENST00000527683 MRC1P22897 1456 aa7.43□□□□□ -1.22
LINC01001-202ENST00000527683 RASSF10A6NK89 507 aa7.43□□□□□ -1.22
LINC01001-202ENST00000527683 TMEM229AB2RXF0 380 aa7.43□□□□□ -1.22
LINC01001-202ENST00000527683 SPATA31C2B4DYI2 1134 aa7.43□□□□□ -1.22
LINC01001-202ENST00000527683 ALDH1B1P30837 517 aa7.43□□□□□ -1.22
LINC01001-202ENST00000527683 PRKAR2BP31323 418 aa7.43□□□□□ -1.22
LINC01001-202ENST00000527683 SOX11P35716 441 aa7.43□□□□□ -1.22
LINC01001-202ENST00000527683 USP4Q13107 963 aa7.43□□□□□ -1.22
LINC01001-202ENST00000527683 HDGFL1Q5TGJ6 251 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms