RNA–Protein interactions for RNA: ENST00000527363.5

C11orf54-205, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 1,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-205ENST00000527363 CCDC85AQ96PX6 553 aaPredicted RBP13.47□□□□□ -0.25
C11orf54-205ENST00000527363 TDRD3Q9H7E2 651 aaKnown RBP13.47□□□□□ -0.25
C11orf54-205ENST00000527363 DBF4Q9UBU7 674 aaPredicted RBP13.47□□□□□ -0.25
C11orf54-205ENST00000527363 SLC45A1Q9Y2W3 748 aa13.47□□□□□ -0.25
C11orf54-205ENST00000527363 TCP10L2B9ZVM9 353 aa13.46□□□□□ -0.25
C11orf54-205ENST00000527363 CXCL11O14625 94 aa13.46□□□□□ -0.25
C11orf54-205ENST00000527363 CYP2C8P10632 490 aa13.46□□□□□ -0.25
C11orf54-205ENST00000527363 IL1R1P14778 569 aa13.46□□□□□ -0.25
C11orf54-205ENST00000527363 FASTKD5Q7L8L6 764 aaKnown RBP13.46□□□□□ -0.25
C11orf54-205ENST00000527363 HYPKQ9NX55 129 aa13.46□□□□□ -0.25
C11orf54-205ENST00000527363 CHPF2Q9P2E5 772 aa13.46□□□□□ -0.25
C11orf54-205ENST00000527363 TAOK2Q9UL54 1235 aa13.46□□□□□ -0.25
C11orf54-205ENST00000527363 IGHMBP2P38935 993 aaKnown RBP13.45□□□□□ -0.26
C11orf54-205ENST00000527363 KCNJ4P48050 445 aa13.45□□□□□ -0.26
C11orf54-205ENST00000527363 CTSWP56202 376 aa13.45□□□□□ -0.26
C11orf54-205ENST00000527363 SHHQ15465 462 aa13.45□□□□□ -0.26
C11orf54-205ENST00000527363 NFE2L2Q16236 605 aa13.45□□□□□ -0.26
C11orf54-205ENST00000527363 TMEM31Q5JXX7 168 aa13.45□□□□□ -0.26
C11orf54-205ENST00000527363 AKNAD1Q5T1N1 836 aa13.45□□□□□ -0.26
C11orf54-205ENST00000527363 DZIP1LQ8IYY4 767 aaKnown RBP13.45□□□□□ -0.26
C11orf54-205ENST00000527363 ECM29Q5VYK3 1845 aa13.45□□□□□ -0.26
C11orf54-205ENST00000527363 MUC6Q6W4X9 2439 aa13.44□□□□□ -0.26
C11orf54-205ENST00000527363 HOXB7P09629 217 aa13.44□□□□□ -0.26
C11orf54-205ENST00000527363 KLRK1P26718 216 aa13.44□□□□□ -0.26
C11orf54-205ENST00000527363 GPAT2Q6NUI2 795 aa13.44□□□□□ -0.26
C11orf54-205ENST00000527363 ZNF804AQ7Z570 1209 aa13.44□□□□□ -0.26
C11orf54-205ENST00000527363 RIC3Q7Z5B4 369 aa13.44□□□□□ -0.26
C11orf54-205ENST00000527363 FAM83AQ86UY5 434 aa13.44□□□□□ -0.26
C11orf54-205ENST00000527363 TTLL11Q8NHH1 800 aa13.44□□□□□ -0.26
C11orf54-205ENST00000527363 ZNF341Q9BYN7 854 aa13.44□□□□□ -0.26
C11orf54-205ENST00000527363 MAP3K21Q5TCX8 1036 aa13.43□□□□□ -0.26
C11orf54-205ENST00000527363 FKBP1CQ5VVH2 108 aa13.43□□□□□ -0.26
C11orf54-205ENST00000527363 CWC25Q9NXE8 425 aaPredicted RBP13.43□□□□□ -0.26
C11orf54-205ENST00000527363 GRIN2CQ14957 1233 aa13.42□□□□□ -0.26
C11orf54-205ENST00000527363 SMCR8Q8TEV9 937 aaPredicted RBP13.42□□□□□ -0.26
C11orf54-205ENST00000527363 GPR37L1O60883 481 aa13.41□□□□□ -0.26
C11orf54-205ENST00000527363 GOLGA2Q08379 1002 aa13.41□□□□□ -0.26
C11orf54-205ENST00000527363 FAM110CQ1W6H9 321 aa13.41□□□□□ -0.26
C11orf54-205ENST00000527363 NOL9Q5SY16 702 aaKnown RBP13.41□□□□□ -0.26
C11orf54-205ENST00000527363 C9orf50Q5SZB4 431 aa13.41□□□□□ -0.26
C11orf54-205ENST00000527363 HDGFL1Q5TGJ6 251 aa13.41□□□□□ -0.26
C11orf54-205ENST00000527363 GAS2L1Q99501 681 aaPredicted RBP13.41□□□□□ -0.26
C11orf54-205ENST00000527363 PNNQ9H307 717 aaKnown RBP13.41□□□□□ -0.26
C11orf54-205ENST00000527363 GREM2Q9H772 168 aa13.41□□□□□ -0.26
C11orf54-205ENST00000527363 ZNF112Q9UJU3 913 aa13.41□□□□□ -0.26
C11orf54-205ENST00000527363 TTF2Q9UNY4 1162 aaKnown RBP13.41□□□□□ -0.26
C11orf54-205ENST00000527363 DDX60LQ5H9U9 1706 aaKnown RBP13.41□□□□□ -0.26
C11orf54-205ENST00000527363 MRE11P49959 708 aa13.4□□□□□ -0.26
C11orf54-205ENST00000527363 HDLBPQ00341 1268 aaKnown RBP13.4□□□□□ -0.26
C11orf54-205ENST00000527363 TRMT44Q8IYL2 757 aaKnown RBP13.4□□□□□ -0.26
C11orf54-205ENST00000527363 MPHOSPH8Q99549 860 aa13.4□□□□□ -0.26
C11orf54-205ENST00000527363 TMOD2Q9NZR1 351 aa13.4□□□□□ -0.26
C11orf54-205ENST00000527363 RPAP1Q9BWH6 1393 aaPredicted RBP13.4□□□□□ -0.26
C11orf54-205ENST00000527363 A0A0G2JLL6 359 aaPredicted RBP13.39□□□□□ -0.27
C11orf54-205ENST00000527363 ZBTB22O15209 634 aa13.39□□□□□ -0.27
C11orf54-205ENST00000527363 INPP5BP32019 993 aa13.39□□□□□ -0.27
C11orf54-205ENST00000527363 CRKP46108 304 aa13.39□□□□□ -0.27
C11orf54-205ENST00000527363 PRRT2Q7Z6L0 340 aaPredicted RBP13.39□□□□□ -0.27
C11orf54-205ENST00000527363 PLEKHF1Q96S99 279 aa13.39□□□□□ -0.27
C11orf54-205ENST00000527363 TSPYL2Q9H2G4 693 aaPredicted RBP13.39□□□□□ -0.27
C11orf54-205ENST00000527363 GJD2Q9UKL4 321 aa13.39□□□□□ -0.27
C11orf54-205ENST00000527363 U3KPZ7 1027 aaPredicted RBP13.39□□□□□ -0.27
C11orf54-205ENST00000527363 XRCC5P13010 732 aaKnown RBP13.38□□□□□ -0.27
C11orf54-205ENST00000527363 PRKAR2AP13861 404 aaKnown RBP13.38□□□□□ -0.27
C11orf54-205ENST00000527363 FOXK2Q01167 660 aa13.38□□□□□ -0.27
C11orf54-205ENST00000527363 CHRNDQ07001 517 aa13.38□□□□□ -0.27
C11orf54-205ENST00000527363 PDE3AQ14432 1141 aa13.38□□□□□ -0.27
C11orf54-205ENST00000527363 AAK1Q2M2I8 961 aa13.38□□□□□ -0.27
C11orf54-205ENST00000527363 MFSD14BQ5SR56 506 aa13.38□□□□□ -0.27
C11orf54-205ENST00000527363 MYD88Q99836 296 aa13.38□□□□□ -0.27
C11orf54-205ENST00000527363 ZNF576Q9H609 170 aa13.38□□□□□ -0.27
C11orf54-205ENST00000527363 SPINK5Q9NQ38 1064 aaPredicted RBP13.38□□□□□ -0.27
C11orf54-205ENST00000527363 FOXD4L1Q9NU39 408 aa13.38□□□□□ -0.27
C11orf54-205ENST00000527363 BMP1P13497 986 aa13.37□□□□□ -0.27
C11orf54-205ENST00000527363 TRIM32Q13049 653 aa13.37□□□□□ -0.27
C11orf54-205ENST00000527363 LHX8Q68G74 356 aa13.37□□□□□ -0.27
C11orf54-205ENST00000527363 ANKRD13CQ8N6S4 541 aa13.37□□□□□ -0.27
C11orf54-205ENST00000527363 TRIB2Q92519 343 aa13.37□□□□□ -0.27
C11orf54-205ENST00000527363 MRIQ9BWK5 157 aa13.37□□□□□ -0.27
C11orf54-205ENST00000527363 SENP6Q9GZR1 1112 aaPredicted RBP13.37□□□□□ -0.27
C11orf54-205ENST00000527363 CXXC1Q9P0U4 656 aaPredicted RBP13.37□□□□□ -0.27
C11orf54-205ENST00000527363 PNMA3Q9UL41 463 aa13.37□□□□□ -0.27
C11orf54-205ENST00000527363 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.36□□□□□ -0.27
C11orf54-205ENST00000527363 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.36□□□□□ -0.27
C11orf54-205ENST00000527363 GCLCP48506 637 aaPredicted RBP13.36□□□□□ -0.27
C11orf54-205ENST00000527363 PPM1EQ8WY54 764 aa13.36□□□□□ -0.27
C11orf54-205ENST00000527363 EPHX3Q9H6B9 360 aa13.36□□□□□ -0.27
C11orf54-205ENST00000527363 MAPK8IP3Q9UPT6 1336 aa13.36□□□□□ -0.27
C11orf54-205ENST00000527363 MGAMO43451 1857 aa13.36□□□□□ -0.27
C11orf54-205ENST00000527363 DNAJB2P25686 324 aa13.35□□□□□ -0.27
C11orf54-205ENST00000527363 POTEEQ6S8J3 1075 aa13.35□□□□□ -0.27
C11orf54-205ENST00000527363 MIGA2Q7L4E1 593 aa13.35□□□□□ -0.27
C11orf54-205ENST00000527363 JARID2Q92833 1246 aaPredicted RBP13.35□□□□□ -0.27
C11orf54-205ENST00000527363 ARAP2Q8WZ64 1704 aa13.35□□□□□ -0.27
C11orf54-205ENST00000527363 ITGA6P23229 1130 aa13.34□□□□□ -0.27
C11orf54-205ENST00000527363 LMOD3Q0VAK6 560 aa13.34□□□□□ -0.27
C11orf54-205ENST00000527363 RNPC3Q96LT9 517 aaKnown RBP13.34□□□□□ -0.27
C11orf54-205ENST00000527363 METTL22Q9BUU2 404 aaPredicted RBP13.34□□□□□ -0.27
C11orf54-205ENST00000527363 JAG2Q9Y219 1238 aa13.34□□□□□ -0.27
C11orf54-205ENST00000527363 CHL1O00533 1208 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms