RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 GJB4Q9NTQ9 266 aa14.46□□□□□ -0.09
CAPN1-208ENST00000527323 TRMT112Q9UI30 125 aaKnown RBP14.46□□□□□ -0.09
CAPN1-208ENST00000527323 COL22A1Q8NFW1 1626 aaPredicted RBP14.46□□□□□ -0.09
CAPN1-208ENST00000527323 KLF18A0A0U1RQI7 1052 aa14.46□□□□□ -0.09
CAPN1-208ENST00000527323 AGXT2Q9BYV1 514 aa14.46□□□□□ -0.09
CAPN1-208ENST00000527323 ERICH4A6NGS2 130 aa14.45□□□□□ -0.1
CAPN1-208ENST00000527323 DHX16O60231 1041 aaKnown RBP14.45□□□□□ -0.1
CAPN1-208ENST00000527323 MARCKSP29966 332 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-208ENST00000527323 BMS1Q14692 1282 aaKnown RBP14.45□□□□□ -0.1
CAPN1-208ENST00000527323 LRRC4BQ9NT99 713 aa14.45□□□□□ -0.1
CAPN1-208ENST00000527323 CWC25Q9NXE8 425 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-208ENST00000527323 DNAI1Q9UI46 699 aa14.45□□□□□ -0.1
CAPN1-208ENST00000527323 MAST3O60307 1309 aa14.45□□□□□ -0.1
CAPN1-208ENST00000527323 SALL1Q9NSC2 1324 aa14.45□□□□□ -0.1
CAPN1-208ENST00000527323 GOLGA8BA8MQT2 603 aa14.45□□□□□ -0.1
CAPN1-208ENST00000527323 NLRP12P59046 1061 aa14.45□□□□□ -0.1
CAPN1-208ENST00000527323 LRRC24Q50LG9 513 aa14.45□□□□□ -0.1
CAPN1-208ENST00000527323 TAF3Q5VWG9 929 aa14.45□□□□□ -0.1
CAPN1-208ENST00000527323 DOT1LQ8TEK3 1739 aa14.45□□□□□ -0.1
CAPN1-208ENST00000527323 ST7Q9NRC1 585 aa14.45□□□□□ -0.1
CAPN1-208ENST00000527323 CCDC87Q9NVE4 849 aa14.45□□□□□ -0.1
CAPN1-208ENST00000527323 PSDA5PKW4 1024 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-208ENST00000527323 SERPINC1P01008 464 aa14.45□□□□□ -0.1
CAPN1-208ENST00000527323 FANCCQ00597 558 aa14.45□□□□□ -0.1
CAPN1-208ENST00000527323 MYSM1Q5VVJ2 828 aa14.45□□□□□ -0.1
CAPN1-208ENST00000527323 YEATS4O95619 227 aa14.44□□□□□ -0.1
CAPN1-208ENST00000527323 IMMTQ16891 758 aaKnown RBP14.44□□□□□ -0.1
CAPN1-208ENST00000527323 ARHGAP29Q52LW3 1261 aa14.44□□□□□ -0.1
CAPN1-208ENST00000527323 CDCA7Q9BWT1 371 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-208ENST00000527323 WTIPA6NIX2 430 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-208ENST00000527323 M0R2C6 588 aa14.44□□□□□ -0.1
CAPN1-208ENST00000527323 PRC1O43663 620 aa14.44□□□□□ -0.1
CAPN1-208ENST00000527323 GNL2Q13823 731 aaKnown RBP14.44□□□□□ -0.1
CAPN1-208ENST00000527323 MNS1Q8NEH6 495 aa14.44□□□□□ -0.1
CAPN1-208ENST00000527323 FBXO18Q8NFZ0 1043 aa14.44□□□□□ -0.1
CAPN1-208ENST00000527323 WWC3Q9ULE0 1092 aa14.44□□□□□ -0.1
CAPN1-208ENST00000527323 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.44□□□□□ -0.13e-6■□□□□ 10.3
CAPN1-208ENST00000527323 RALYLQ86SE5 291 aaKnown RBP14.43□□□□□ -0.1
CAPN1-208ENST00000527323 LRRN4CLQ8ND94 238 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 UBXN4Q92575 508 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 KCND1Q9NSA2 647 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 NIP7Q9Y221 180 aaKnown RBP eCLIP14.43□□□□□ -0.1
CAPN1-208ENST00000527323 UBN2Q6ZU65 1347 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 GLI3P10071 1580 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 URI1O94763 535 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-208ENST00000527323 ATP1A3P13637 1013 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 PFKFB1P16118 471 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 IL15P40933 162 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-208ENST00000527323 UBASH3AP57075 661 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 TCIRG1Q13488 830 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 CFAP100Q494V2 611 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 ANO1Q5XXA6 986 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 ATG9AQ7Z3C6 839 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 FAM177A1Q8N128 213 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-208ENST00000527323 OSBP2Q969R2 916 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 POLR3EQ9NVU0 708 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 MRC1P22897 1456 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 NRAPQ86VF7 1730 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 A0A1B0GUL7 405 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 CCDC66A2RUB6 948 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 POTEAQ6S8J7 498 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 KRT27Q7Z3Y8 459 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 BRAPQ7Z569 592 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 BPIFA3Q9BQP9 254 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 ZNF446Q9NWS9 450 aa14.43□□□□□ -0.1
CAPN1-208ENST00000527323 DHX8Q14562 1220 aaKnown RBP14.42□□□□□ -0.1
CAPN1-208ENST00000527323 HSP90AB3PQ58FF7 597 aa14.42□□□□□ -0.1
CAPN1-208ENST00000527323 SUSD4Q5VX71 490 aa14.42□□□□□ -0.1
CAPN1-208ENST00000527323 FAM196AQ6ZSG2 479 aa14.42□□□□□ -0.1
CAPN1-208ENST00000527323 L2HGDHQ9H9P8 463 aa14.42□□□□□ -0.1
CAPN1-208ENST00000527323 SYKP43405 635 aa14.42□□□□□ -0.1
CAPN1-208ENST00000527323 ETF1P62495 437 aaKnown RBP14.42□□□□□ -0.1
CAPN1-208ENST00000527323 NOL10Q9BSC4 688 aaKnown RBP14.42□□□□□ -0.1
CAPN1-208ENST00000527323 CEP126Q9P2H0 1117 aa14.42□□□□□ -0.1
CAPN1-208ENST00000527323 MYH14Q7Z406 1995 aaKnown RBP14.41□□□□□ -0.1
CAPN1-208ENST00000527323 CCP110O43303 1012 aa14.41□□□□□ -0.1
CAPN1-208ENST00000527323 CMA1P23946 247 aa14.41□□□□□ -0.1
CAPN1-208ENST00000527323 CLCN6P51797 869 aa14.41□□□□□ -0.1
CAPN1-208ENST00000527323 FOXO4P98177 505 aa14.41□□□□□ -0.1
CAPN1-208ENST00000527323 UTP14AQ9BVJ6 771 aaKnown RBP14.41□□□□□ -0.1
CAPN1-208ENST00000527323 ARGLU1Q9NWB6 273 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-208ENST00000527323 MAP3K15Q6ZN16 1313 aa14.41□□□□□ -0.1
CAPN1-208ENST00000527323 ABCC6O95255 1503 aa14.41□□□□□ -0.1
CAPN1-208ENST00000527323 NCAPHQ15003 741 aa14.41□□□□□ -0.1
CAPN1-208ENST00000527323 PTPN21Q16825 1174 aa14.41□□□□□ -0.1
CAPN1-208ENST00000527323 LRRFIP1Q32MZ4 808 aaKnown RBP14.41□□□□□ -0.1
CAPN1-208ENST00000527323 TTC39AQ5SRH9 613 aa14.41□□□□□ -0.1
CAPN1-208ENST00000527323 GREM2Q9H772 168 aa14.41□□□□□ -0.1
CAPN1-208ENST00000527323 SEC31BQ9NQW1 1179 aa14.41□□□□□ -0.1
CAPN1-208ENST00000527323 ADAMTS7Q9UKP4 1686 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 KIF28PB7ZC32 967 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 EYA2O00167 538 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 FGAP02671 866 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 GTF2E1P29083 439 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-208ENST00000527323 GOLGA8FQ08AF8 430 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 GOLGA8DPQ0D2H9 430 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 CCDC158Q5M9N0 1113 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 NLRP10Q86W26 655 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 CBFA2T2O43439 604 aa14.4□□□□□ -0.1
CAPN1-208ENST00000527323 TUBB4AP04350 444 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms