RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 ZNF213O14771 459 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 ECE2O60344 883 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 DTNBO60941 627 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 LARGE1O95461 756 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 PTGER2P43116 358 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 TDO2P48775 406 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 KRT32Q14532 448 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 CCDC93Q567U6 631 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 CHST3Q7LGC8 479 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 TBC1D10CQ8IV04 446 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 CERS5Q8N5B7 392 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 NKX2-3Q8TAU0 364 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 TMX3Q96JJ7 454 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 RTFDC1Q9BY42 306 aaPredicted RBP10.4□□□□□ -0.74
PABPC4-220ENST00000525669 LRRC2Q9BYS8 371 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 NAPBQ9H115 298 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 TACC3Q9Y6A5 838 aa10.4□□□□□ -0.74
PABPC4-220ENST00000525669 ARFGEF1Q9Y6D6 1849 aa10.4□□□□□ -0.75
PABPC4-220ENST00000525669 DDX60LQ5H9U9 1706 aaKnown RBP10.39□□□□□ -0.75
PABPC4-220ENST00000525669 CYP2D7A0A087X1C5 515 aa10.39□□□□□ -0.75
PABPC4-220ENST00000525669 ZBTB22O15209 634 aa10.39□□□□□ -0.75
PABPC4-220ENST00000525669 PPIP5K2O43314 1243 aa10.39□□□□□ -0.75
PABPC4-220ENST00000525669 GNAT2P19087 354 aa10.39□□□□□ -0.75
PABPC4-220ENST00000525669 TGFB2P61812 414 aa10.39□□□□□ -0.75
PABPC4-220ENST00000525669 TOB2Q14106 344 aaPredicted RBP10.39□□□□□ -0.75
PABPC4-220ENST00000525669 SLC4A8Q2Y0W8 1093 aa10.39□□□□□ -0.75
PABPC4-220ENST00000525669 SH3RF3Q8TEJ3 882 aaPredicted RBP10.39□□□□□ -0.75
PABPC4-220ENST00000525669 ZNF277Q9NRM2 450 aaPredicted RBP10.39□□□□□ -0.75
PABPC4-220ENST00000525669 PIM2Q9P1W9 311 aa10.39□□□□□ -0.75
PABPC4-220ENST00000525669 MROH7-TTC4A0A0A0MT08 1334 aa10.38□□□□□ -0.75
PABPC4-220ENST00000525669 NEDD4P46934 1319 aa10.38□□□□□ -0.75
PABPC4-220ENST00000525669 MINDY4BA8MYZ0 360 aa10.38□□□□□ -0.75
PABPC4-220ENST00000525669 BTDP43251 543 aa10.38□□□□□ -0.75
PABPC4-220ENST00000525669 SCNN1DP51172 638 aa10.38□□□□□ -0.75
PABPC4-220ENST00000525669 GSTO1P78417 241 aa10.38□□□□□ -0.75
PABPC4-220ENST00000525669 EVX2Q03828 476 aa10.38□□□□□ -0.75
PABPC4-220ENST00000525669 ALX1Q15699 326 aa10.38□□□□□ -0.75
PABPC4-220ENST00000525669 CC2D2BQ6DHV5 1058 aa10.38□□□□□ -0.75
PABPC4-220ENST00000525669 Q6ZUG5 572 aa10.38□□□□□ -0.75
PABPC4-220ENST00000525669 SUPT20HQ8NEM7 779 aa10.38□□□□□ -0.75
PABPC4-220ENST00000525669 NLGN2Q8NFZ4 835 aa10.38□□□□□ -0.75
PABPC4-220ENST00000525669 TBC1D22AQ8WUA7 517 aa10.38□□□□□ -0.75
PABPC4-220ENST00000525669 YDJCA8MPS7 323 aa10.37□□□□□ -0.75
PABPC4-220ENST00000525669 LDHCP07864 332 aa10.37□□□□□ -0.75
PABPC4-220ENST00000525669 CYP2D6P10635 497 aa10.37□□□□□ -0.75
PABPC4-220ENST00000525669 MCM2P49736 904 aa10.37□□□□□ -0.75
PABPC4-220ENST00000525669 KIAA2012Q0VF49 1180 aa10.37□□□□□ -0.75
PABPC4-220ENST00000525669 STK3Q13188 491 aa10.37□□□□□ -0.75
PABPC4-220ENST00000525669 DALRD3Q5D0E6 543 aaKnown RBP10.37□□□□□ -0.75
PABPC4-220ENST00000525669 RTKN2Q8IZC4 609 aa10.37□□□□□ -0.75
PABPC4-220ENST00000525669 NECAB1Q8N987 351 aa10.37□□□□□ -0.75
PABPC4-220ENST00000525669 NOL10Q9BSC4 688 aaKnown RBP10.37□□□□□ -0.75
PABPC4-220ENST00000525669 CRNKL1Q9BZJ0 848 aaKnown RBP10.37□□□□□ -0.75
PABPC4-220ENST00000525669 NACAP1Q9BZK3 213 aa10.37□□□□□ -0.75
PABPC4-220ENST00000525669 GPHNQ9NQX3 736 aaPredicted RBP10.37□□□□□ -0.75
PABPC4-220ENST00000525669 TPCN1Q9ULQ1 816 aa10.37□□□□□ -0.75
PABPC4-220ENST00000525669 TTF2Q9UNY4 1162 aaKnown RBP10.37□□□□□ -0.75
PABPC4-220ENST00000525669 LIMCH1Q9UPQ0 1083 aa10.37□□□□□ -0.75
PABPC4-220ENST00000525669 BCS1LQ9Y276 419 aa10.37□□□□□ -0.75
PABPC4-220ENST00000525669 ZMYM6O95789 1325 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 B4E1Z4 1266 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 DDIT3P35638 169 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 ANTXR2P58335 489 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 FGD1P98174 961 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 EXOSC10Q01780 885 aaKnown RBP10.36□□□□□ -0.75
PABPC4-220ENST00000525669 PPARAQ07869 468 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 APOBRQ0VD83 1088 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 ME3Q16798 604 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 RRP12Q5JTH9 1297 aaKnown RBP10.36□□□□□ -0.75
PABPC4-220ENST00000525669 CTR9Q6PD62 1173 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 CYB5R4Q7L1T6 521 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 DHX32Q7L7V1 743 aaKnown RBP10.36□□□□□ -0.75
PABPC4-220ENST00000525669 PODNQ7Z5L7 613 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 RALYLQ86SE5 291 aaKnown RBP10.36□□□□□ -0.75
PABPC4-220ENST00000525669 CCDC83Q8IWF9 413 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 MB21D2Q8IYB1 491 aaPredicted RBP10.36□□□□□ -0.75
PABPC4-220ENST00000525669 NCOA7Q8NI08 942 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 BRF1Q92994 677 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 DCP1AQ9NPI6 582 aaPredicted RBP10.36□□□□□ -0.75
PABPC4-220ENST00000525669 TOMM22Q9NS69 142 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 DAGLAQ9Y4D2 1042 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 CD2APQ9Y5K6 639 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 MYH8P13535 1937 aa10.36□□□□□ -0.75
PABPC4-220ENST00000525669 USP17L3A6NCW0 530 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 USP17L4A6NCW7 530 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 USP17L12C9JPN9 530 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 USP17L21D6R901 530 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 PRC1O43663 620 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 HMGB1P09429 215 aaKnown RBP10.35□□□□□ -0.75
PABPC4-220ENST00000525669 USP17L8P0C7I0 530 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 USP5P45974 858 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 ST3GAL1Q11201 340 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 CUL4AQ13619 759 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 DACT2Q5SW24 774 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 USP17L1Q7RTZ2 530 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 KIAA0825Q8IV33 1275 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 MAPKAPK5Q8IW41 473 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 LARGE2Q8N3Y3 721 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 TGFBRAP1Q8WUH2 860 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 PSMD1Q99460 953 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms