RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 TMEM139Q8IV31 216 aa12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 SMARCC1Q92922 1105 aaPredicted RBP12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 PHAXQ9H814 394 aaKnown RBP12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 ECHDC1Q9NTX5 307 aa12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 ARHGEF10O15013 1369 aa12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 STK38Q15208 465 aa12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 CPLX2Q6PUV4 134 aaKnown RBP12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 ZNF589Q86UQ0 364 aaPredicted RBP12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 KCNB2Q92953 911 aa12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 ZNF396Q96N95 335 aaPredicted RBP12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 HINFPQ9BQA5 517 aa12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 FSD1Q9BTV5 496 aa12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 HSD3B7Q9H2F3 369 aa12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 BOLA2Q9H3K6 86 aa12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 SAMM50Q9Y512 469 aa12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 TRPM3Q9HCF6 1732 aaPredicted RBP12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 AKAP17AQ02040 695 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 ZNF530Q6P9A1 599 aaPredicted RBP12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 TOM1L2Q6ZVM7 507 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 AACSQ86V21 672 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 VSTM4Q8IW00 320 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 HNRNPLLQ8WVV9 542 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 CCDC8Q9H0W5 538 aaPredicted RBP12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 SLC24A3Q9HC58 644 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 EBAG9O00559 213 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 NLRP12P59046 1061 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 ZNF569Q5MCW4 686 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 LRCH2Q5VUJ6 765 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 IGSF22Q8N9C0 903 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 CPLX3Q8WVH0 158 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 CCDC189A1A4V9 331 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 PTPDC1A2A3K4 754 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 MYO1FO00160 1098 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 ZNF202O95125 648 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 EVA1CP58658 441 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 EDC3Q96F86 508 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 CD248Q9HCU0 757 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 CLIC4Q9Y696 253 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 CAPN7Q9Y6W3 813 aa12.87□□□□□ -0.35
CLNS1A-204ENST00000525428 SOWAHDA6NJG2 315 aa12.86□□□□□ -0.35
CLNS1A-204ENST00000525428 SETQ01105 290 aaPredicted RBP12.86□□□□□ -0.35
CLNS1A-204ENST00000525428 EVI5LQ96CN4 794 aa12.86□□□□□ -0.35
CLNS1A-204ENST00000525428 KDRP35968 1356 aa12.86□□□□□ -0.35
CLNS1A-204ENST00000525428 CBFA2T2O43439 604 aa12.86□□□□□ -0.35
CLNS1A-204ENST00000525428 ZMYND10O75800 440 aa12.86□□□□□ -0.35
CLNS1A-204ENST00000525428 CHGBP05060 677 aa12.86□□□□□ -0.35
CLNS1A-204ENST00000525428 INPP5BP32019 993 aa12.86□□□□□ -0.35
CLNS1A-204ENST00000525428 EGFL6Q8IUX8 553 aa12.86□□□□□ -0.35
CLNS1A-204ENST00000525428 NOA1Q8NC60 698 aaKnown RBP12.86□□□□□ -0.35
CLNS1A-204ENST00000525428 NEK1Q96PY6 1258 aa12.86□□□□□ -0.35
CLNS1A-204ENST00000525428 LTN1O94822 1766 aa12.86□□□□□ -0.35
CLNS1A-204ENST00000525428 LTBP4Q8N2S1 1624 aa12.86□□□□□ -0.35
CLNS1A-204ENST00000525428 GNAT3A8MTJ3 354 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 USP8P40818 1118 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 BCAS4Q8TDM0 211 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 ACBD3Q9H3P7 528 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 KAT14Q9H8E8 782 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 BTG4Q9NY30 223 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 TUBGCP6Q96RT7 1819 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 FRMD3A2A2Y4 597 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 GOLGA6L9A6NEM1 432 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 GOLIM4O00461 696 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 TOM1O60784 492 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 NEBLO76041 1014 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 SYF2O95926 243 aaKnown RBP12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 EIF2S2P20042 333 aaKnown RBP12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 MARCKSP29966 332 aaPredicted RBP12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 USP5P45974 858 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 ADALQ6DHV7 355 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 ILDR1Q86SU0 546 aaPredicted RBP12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 CEP112Q8N8E3 955 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 INTS13Q9NVM9 706 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 CDC23Q9UJX2 597 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 RAB21Q9UL25 225 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 DLG5Q8TDM6 1919 aa12.85□□□□□ -0.35
CLNS1A-204ENST00000525428 KCNQ3O43525 872 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 MYL5Q02045 173 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 CHST3Q7LGC8 479 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 FCHSD1Q86WN1 690 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 RAPGEF4Q8WZA2 1011 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 GPATCH3Q96I76 525 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 CENPHQ9H3R5 247 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 NDUFB9Q9Y6M9 179 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 KIF1AQ12756 1690 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 KIF5CO60282 957 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 POLA2Q14181 598 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 TC2NQ8N9U0 490 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 RNF217Q8TC41 542 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 BPIFA3Q9BQP9 254 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 GJB4Q9NTQ9 266 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 BCCIPQ9P287 314 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 CTAGE15A4D2H0 777 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 CTAGE8P0CG41 777 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 PNOCQ13519 176 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 CCDC129Q6ZRS4 1044 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 CTAGE6Q86UF2 777 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 CTAGE4Q8IX94 777 aa12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 NSUN7Q8NE18 718 aaKnown RBP12.84□□□□□ -0.35
CLNS1A-204ENST00000525428 N4BP2L2Q92802 583 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms