RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 BIRC3Q13489 604 aa15.27■□□□□ 0.03
LRRK1-202ENST00000525284 MAP3K21Q5TCX8 1036 aa15.27■□□□□ 0.03
LRRK1-202ENST00000525284 HIP1RO75146 1068 aa15.26■□□□□ 0.03
LRRK1-202ENST00000525284 POLD1P28340 1107 aa15.26■□□□□ 0.03
LRRK1-202ENST00000525284 TTLL3Q9Y4R7 772 aa15.26■□□□□ 0.03
LRRK1-202ENST00000525284 LDHCP07864 332 aa15.26■□□□□ 0.03
LRRK1-202ENST00000525284 PALM3A6NDB9 673 aaPredicted RBP15.26■□□□□ 0.03
LRRK1-202ENST00000525284 TMED1Q13445 227 aa15.26■□□□□ 0.03
LRRK1-202ENST00000525284 GPTP24298 496 aa15.26■□□□□ 0.03
LRRK1-202ENST00000525284 ATP6V1AP38606 617 aa15.26■□□□□ 0.03
LRRK1-202ENST00000525284 CNGA4Q8IV77 575 aa15.26■□□□□ 0.03
LRRK1-202ENST00000525284 ECHDC1Q9NTX5 307 aa15.26■□□□□ 0.03
LRRK1-202ENST00000525284 HMG20BQ9P0W2 317 aa15.26■□□□□ 0.03
LRRK1-202ENST00000525284 TIAM1Q13009 1591 aa15.26■□□□□ 0.03
LRRK1-202ENST00000525284 OAS2P29728 719 aaKnown RBP15.26■□□□□ 0.03
LRRK1-202ENST00000525284 SP4Q02446 784 aa15.26■□□□□ 0.03
LRRK1-202ENST00000525284 KIFAP3Q92845 792 aa15.26■□□□□ 0.03
LRRK1-202ENST00000525284 EFCC1Q9HA90 598 aa15.26■□□□□ 0.03
LRRK1-202ENST00000525284 ATP6V1E1P36543 226 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 NFE2L2Q16236 605 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 CHMP2AO43633 222 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 WDR44Q5JSH3 913 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 LGSNQ5TDP6 509 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 JADE1Q6IE81 842 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 RBSNQ9H1K0 784 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 PLEKHA4Q9H4M7 779 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 TMOD3Q9NYL9 352 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 AQRO60306 1485 aaKnown RBP eCLIP15.25■□□□□ 0.03
LRRK1-202ENST00000525284 TBC1D8O95759 1140 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 SERPINB6P35237 376 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 CARD6Q9BX69 1037 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 HDAC9Q9UKV0 1011 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 USTQ9Y2C2 406 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 SPTLC2O15270 562 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 ELF2Q15723 593 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 CRNKL1Q9BZJ0 848 aaKnown RBP15.25■□□□□ 0.03
LRRK1-202ENST00000525284 UBL4BQ8N7F7 174 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 VPS37BQ9H9H4 285 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 BAG5Q9UL15 447 aa15.25■□□□□ 0.03
LRRK1-202ENST00000525284 C20orf194Q5TEA3 1177 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 A6NNZ2 444 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 RNF40O75150 1001 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 SLC12A2P55011 1212 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 TUBB8Q3ZCM7 444 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 FYCO1Q9BQS8 1478 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 CFAP61Q8NHU2 1237 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 PSMB7Q99436 277 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 CTNND2Q9UQB3 1225 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 TROVE2P10155 538 aaKnown RBP eCLIP15.24■□□□□ 0.03
LRRK1-202ENST00000525284 TMPOP42166 694 aaKnown RBP15.24■□□□□ 0.03
LRRK1-202ENST00000525284 MAP3K7CLP57077 242 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 SDCCAG3Q96C92 435 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 SBNO2Q9Y2G9 1366 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 STX2P32856 288 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 SLFN5Q08AF3 891 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 TMTC4Q5T4D3 741 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 BSPRYQ5W0U4 402 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 KLHDC4Q8TBB5 520 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 ATP2A3Q93084 1043 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 SPATS2LQ9NUQ6 558 aaKnown RBP15.24■□□□□ 0.03
LRRK1-202ENST00000525284 TRIM75PA6NK02 468 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 LONRF3Q496Y0 759 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 NOC4LQ9BVI4 516 aaKnown RBP15.24■□□□□ 0.03
LRRK1-202ENST00000525284 KRT23Q9C075 422 aa15.24■□□□□ 0.03
LRRK1-202ENST00000525284 LRRD1A4D1F6 860 aa15.23■□□□□ 0.03
LRRK1-202ENST00000525284 Q6ZUG5 572 aa15.23■□□□□ 0.03
LRRK1-202ENST00000525284 FNBP1Q96RU3 617 aa15.23■□□□□ 0.03
LRRK1-202ENST00000525284 RPSAP08865 295 aaKnown RBP15.23■□□□□ 0.03
LRRK1-202ENST00000525284 TNNI2P48788 182 aa15.23■□□□□ 0.03
LRRK1-202ENST00000525284 EP400NLQ6ZTU2 488 aa15.23■□□□□ 0.03
LRRK1-202ENST00000525284 NUCKS1Q9H1E3 243 aaKnown RBP15.23■□□□□ 0.03
LRRK1-202ENST00000525284 F13A1P00488 732 aa15.23■□□□□ 0.03
LRRK1-202ENST00000525284 GPIHBP1Q8IV16 184 aa15.23■□□□□ 0.03
LRRK1-202ENST00000525284 RASEFQ8IZ41 740 aa15.23■□□□□ 0.03
LRRK1-202ENST00000525284 ZBBXA8MT70 800 aa15.23■□□□□ 0.03
LRRK1-202ENST00000525284 CEP104O60308 925 aa15.23■□□□□ 0.03
LRRK1-202ENST00000525284 SLC8A3P57103 927 aa15.23■□□□□ 0.03
LRRK1-202ENST00000525284 ZKSCAN3Q9BRR0 538 aa15.23■□□□□ 0.03
LRRK1-202ENST00000525284 PLCB1Q9NQ66 1216 aa15.23■□□□□ 0.03
LRRK1-202ENST00000525284 DHX29Q7Z478 1369 aaKnown RBP15.22■□□□□ 0.03
LRRK1-202ENST00000525284 SPDYE3A6NKU9 549 aa15.22■□□□□ 0.03
LRRK1-202ENST00000525284 RAP1GDS1P52306 607 aa15.22■□□□□ 0.03
LRRK1-202ENST00000525284 LDHAL6AQ6ZMR3 332 aa15.22■□□□□ 0.03
LRRK1-202ENST00000525284 PPP4R1Q8TF05 950 aa15.22■□□□□ 0.03
LRRK1-202ENST00000525284 SSH1Q8WYL5 1049 aa15.22■□□□□ 0.03
LRRK1-202ENST00000525284 ZNF692Q9BU19 519 aaPredicted RBP15.22■□□□□ 0.03
LRRK1-202ENST00000525284 LIN9Q5TKA1 542 aa15.22■□□□□ 0.03
LRRK1-202ENST00000525284 MRFAP1L1Q96HT8 127 aa15.22■□□□□ 0.03
LRRK1-202ENST00000525284 CASP2P42575 452 aa15.22■□□□□ 0.03
LRRK1-202ENST00000525284 NBPF6Q5VWK0 638 aa15.22■□□□□ 0.03
LRRK1-202ENST00000525284 NBPF4Q96M43 638 aa15.22■□□□□ 0.03
LRRK1-202ENST00000525284 GDAP1L1Q96MZ0 367 aa15.22■□□□□ 0.03
LRRK1-202ENST00000525284 PRXQ9BXM0 1461 aa15.22■□□□□ 0.03
LRRK1-202ENST00000525284 TRAF5O00463 557 aa15.22■□□□□ 0.03
LRRK1-202ENST00000525284 EPB41P11171 864 aaKnown RBP15.22■□□□□ 0.03
LRRK1-202ENST00000525284 NUDCD3Q8IVD9 361 aa15.22■□□□□ 0.03
LRRK1-202ENST00000525284 SCHIP1Q9P0W5 487 aaPredicted RBP15.22■□□□□ 0.03
LRRK1-202ENST00000525284 RLBP1P12271 317 aa15.22■□□□□ 0.03
LRRK1-202ENST00000525284 C16orf71Q8IYS4 520 aaPredicted RBP15.22■□□□□ 0.03
LRRK1-202ENST00000525284 VPS16Q9H269 839 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms