RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 MPNDQ8N594 471 aa7□□□□□ -1.29
USP47-204ENST00000525078 KDF1Q8NAX2 398 aaPredicted RBP7□□□□□ -1.29
USP47-204ENST00000525078 C7orf43Q8WVR3 580 aa7□□□□□ -1.29
USP47-204ENST00000525078 KLRG1Q96E93 195 aa7□□□□□ -1.29
USP47-204ENST00000525078 SPATA9Q9BWV2 254 aa7□□□□□ -1.29
USP47-204ENST00000525078 AASDHPPTQ9NRN7 309 aa7□□□□□ -1.29
USP47-204ENST00000525078 TNFRSF10AO00220 468 aa6.99□□□□□ -1.29
USP47-204ENST00000525078 CYP2E1P05181 493 aaPredicted RBP6.99□□□□□ -1.29
USP47-204ENST00000525078 NEK2P51955 445 aa6.99□□□□□ -1.29
USP47-204ENST00000525078 RELBQ01201 579 aa6.99□□□□□ -1.29
USP47-204ENST00000525078 FOXD4Q12950 439 aaPredicted RBP6.99□□□□□ -1.29
USP47-204ENST00000525078 CBX2Q14781 532 aaPredicted RBP6.99□□□□□ -1.29
USP47-204ENST00000525078 C4orf17Q53FE4 359 aa6.99□□□□□ -1.29
USP47-204ENST00000525078 AKAP4Q5JQC9 854 aa6.99□□□□□ -1.29
USP47-204ENST00000525078 PLA2G2CQ5R387 149 aa6.99□□□□□ -1.29
USP47-204ENST00000525078 WDR78Q5VTH9 848 aa6.99□□□□□ -1.29
USP47-204ENST00000525078 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.99□□□□□ -1.29
USP47-204ENST00000525078 LRRC69Q6ZNQ3 347 aa6.99□□□□□ -1.29
USP47-204ENST00000525078 RNF180Q86T96 592 aa6.99□□□□□ -1.29
USP47-204ENST00000525078 RBBP8NLQ8NC74 664 aaPredicted RBP6.99□□□□□ -1.29
USP47-204ENST00000525078 TTC8Q8TAM2 541 aa6.99□□□□□ -1.29
USP47-204ENST00000525078 AGBL1Q96MI9 1066 aa6.99□□□□□ -1.29
USP47-204ENST00000525078 ZNF395Q9H8N7 513 aaPredicted RBP6.99□□□□□ -1.29
USP47-204ENST00000525078 CHST12Q9NRB3 414 aa6.99□□□□□ -1.29
USP47-204ENST00000525078 DZANK1Q9NVP4 752 aa6.99□□□□□ -1.29
USP47-204ENST00000525078 GPN3Q9UHW5 284 aaPredicted RBP6.99□□□□□ -1.29
USP47-204ENST00000525078 MAPRE3Q9UPY8 281 aa6.99□□□□□ -1.29
USP47-204ENST00000525078 GOLGA6CA6NDK9 693 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 GOLGA6BA6NDN3 693 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 FAM187AA6NFU0 413 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 ENC1O14682 589 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 KHNYNO15037 678 aaKnown RBP6.98□□□□□ -1.29
USP47-204ENST00000525078 AKAP10O43572 662 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 GOLGA6DP0CG33 693 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 CDC27P30260 824 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 PHKA2P46019 1235 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 ITKQ08881 620 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 LONRF2Q1L5Z9 754 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 ARSJQ5FYB0 599 aaPredicted RBP6.98□□□□□ -1.29
USP47-204ENST00000525078 ZC3H12BQ5HYM0 836 aaKnown RBP6.98□□□□□ -1.29
USP47-204ENST00000525078 KANK3Q6NY19 840 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 CNNM4Q6P4Q7 775 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 TREML4Q6UXN2 200 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 RUFY4Q6ZNE9 571 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 REC114Q7Z4M0 266 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 LRRC47Q8N1G4 583 aaKnown RBP6.98□□□□□ -1.29
USP47-204ENST00000525078 RIN3Q8TB24 985 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 MTMR8Q96EF0 704 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 NECAB3Q96P71 396 aaPredicted RBP6.98□□□□□ -1.29
USP47-204ENST00000525078 TCF12Q99081 682 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 ASPSCR1Q9BZE9 553 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 AAASQ9NRG9 546 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 GOLGA6AQ9NYA3 693 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 NOB1Q9ULX3 412 aaKnown RBP6.98□□□□□ -1.29
USP47-204ENST00000525078 PCDHB5Q9Y5E4 795 aa6.98□□□□□ -1.29
USP47-204ENST00000525078 CCDC163A0A0D9SF12 145 aa6.97□□□□□ -1.29
USP47-204ENST00000525078 A0A1W2PQH9 124 aa6.97□□□□□ -1.29
USP47-204ENST00000525078 NPHP1O15259 732 aa6.97□□□□□ -1.29
USP47-204ENST00000525078 ST8SIA5O15466 376 aa6.97□□□□□ -1.29
USP47-204ENST00000525078 NRDCO43847 1150 aa6.97□□□□□ -1.29
USP47-204ENST00000525078 C10orf62Q5T681 223 aaPredicted RBP6.97□□□□□ -1.29
USP47-204ENST00000525078 HGSNATQ68CP4 663 aa6.97□□□□□ -1.29
USP47-204ENST00000525078 MRM1Q6IN84 353 aaKnown RBP6.97□□□□□ -1.29
USP47-204ENST00000525078 CLEC4GQ6UXB4 293 aa6.97□□□□□ -1.29
USP47-204ENST00000525078 DDX46Q7L014 1031 aaKnown RBP6.97□□□□□ -1.29
USP47-204ENST00000525078 C19orf47Q8N9M1 422 aaKnown RBP6.97□□□□□ -1.29
USP47-204ENST00000525078 ZBTB38Q8NAP3 1195 aaPredicted RBP6.97□□□□□ -1.29
USP47-204ENST00000525078 PPM1EQ8WY54 764 aa6.97□□□□□ -1.29
USP47-204ENST00000525078 CEP63Q96MT8 703 aa6.97□□□□□ -1.29
USP47-204ENST00000525078 KIF2CQ99661 725 aa6.97□□□□□ -1.29
USP47-204ENST00000525078 RUSC1Q9BVN2 902 aa6.97□□□□□ -1.29
USP47-204ENST00000525078 ZNF700Q9H0M5 742 aa6.97□□□□□ -1.29
USP47-204ENST00000525078 SALL4Q9UJQ4 1053 aa6.97□□□□□ -1.29
USP47-204ENST00000525078 SAMM50Q9Y512 469 aa6.97□□□□□ -1.29
USP47-204ENST00000525078 PCDHB14Q9Y5E9 798 aa6.97□□□□□ -1.29
USP47-204ENST00000525078 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.97□□□□□ -1.29
USP47-204ENST00000525078 FAM221AA4D161 298 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 IQCA1LA6NCM1 817 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 GSG1L2A8MUP6 293 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 PAGE1O75459 146 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 RFPL3O75679 317 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 RAPGEF3O95398 923 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 CD2BP2O95400 341 aaKnown RBP6.96□□□□□ -1.3
USP47-204ENST00000525078 LMOD3Q0VAK6 560 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 MLC1Q15049 377 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 TTC6Q86TZ1 520 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 NCAPG2Q86XI2 1143 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 CCNJLQ8IV13 435 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 PASD1Q8IV76 773 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 AFAP1L2Q8N4X5 818 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 PAF1Q8N7H5 531 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 SLC39A13Q96H72 371 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 IPO9Q96P70 1041 aaKnown RBP6.96□□□□□ -1.3
USP47-204ENST00000525078 OSMRQ99650 979 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 TMX4Q9H1E5 349 aaPredicted RBP6.96□□□□□ -1.3
USP47-204ENST00000525078 AVENQ9NQS1 362 aaPredicted RBP6.96□□□□□ -1.3
USP47-204ENST00000525078 SEC31BQ9NQW1 1179 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 SLC5A4Q9NY91 659 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 PKD2L1Q9P0L9 805 aa6.96□□□□□ -1.3
USP47-204ENST00000525078 INTUQ9ULD6 942 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms