RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 GNEQ9Y223 722 aaKnown RBP5.49□□□□□ -1.53
CSDE1-208ENST00000524652 AOC2O75106 756 aa5.48□□□□□ -1.53
CSDE1-208ENST00000524652 NFICP08651 508 aa5.48□□□□□ -1.53
CSDE1-208ENST00000524652 RAB6AP20340 208 aa5.48□□□□□ -1.53
CSDE1-208ENST00000524652 ADMP35318 185 aa5.48□□□□□ -1.53
CSDE1-208ENST00000524652 CYP27A1Q02318 531 aa5.48□□□□□ -1.53
CSDE1-208ENST00000524652 GRM2Q14416 872 aa5.48□□□□□ -1.53
CSDE1-208ENST00000524652 PDE3AQ14432 1141 aa5.48□□□□□ -1.53
CSDE1-208ENST00000524652 DYMQ7RTS9 669 aa5.48□□□□□ -1.53
CSDE1-208ENST00000524652 ANGEL1Q9UNK9 670 aaKnown RBP5.48□□□□□ -1.53
CSDE1-208ENST00000524652 CYP26A1O43174 497 aa5.47□□□□□ -1.53
CSDE1-208ENST00000524652 TAL1P17542 331 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-208ENST00000524652 ASPAP45381 313 aa5.47□□□□□ -1.53
CSDE1-208ENST00000524652 VSIG10LQ86VR7 867 aa5.47□□□□□ -1.53
CSDE1-208ENST00000524652 SHISA5Q8N114 240 aa5.47□□□□□ -1.53
CSDE1-208ENST00000524652 CCDC39Q9UFE4 941 aa5.47□□□□□ -1.53
CSDE1-208ENST00000524652 DCTN4Q9UJW0 460 aa5.47□□□□□ -1.53
CSDE1-208ENST00000524652 FAM170BA6NMN3 283 aa5.46□□□□□ -1.54
CSDE1-208ENST00000524652 BRD1O95696 1058 aa5.46□□□□□ -1.54
CSDE1-208ENST00000524652 XRCC5P13010 732 aaKnown RBP5.46□□□□□ -1.54
CSDE1-208ENST00000524652 FAAP100Q0VG06 881 aa5.46□□□□□ -1.54
CSDE1-208ENST00000524652 DUSP27Q5VZP5 1158 aa5.46□□□□□ -1.54
CSDE1-208ENST00000524652 SEZ6L2Q6UXD5 910 aa5.46□□□□□ -1.54
CSDE1-208ENST00000524652 DTHD1Q6ZMT9 781 aa5.46□□□□□ -1.54
CSDE1-208ENST00000524652 TMC7Q7Z402 723 aa5.46□□□□□ -1.54
CSDE1-208ENST00000524652 EPS8L3Q8TE67 593 aaKnown RBP5.46□□□□□ -1.54
CSDE1-208ENST00000524652 FBXL18Q96ME1 805 aa5.46□□□□□ -1.54
CSDE1-208ENST00000524652 FMNL2Q96PY5 1086 aa5.46□□□□□ -1.54
CSDE1-208ENST00000524652 KRT82Q9NSB4 513 aa5.46□□□□□ -1.54
CSDE1-208ENST00000524652 BSDC1Q9NW68 430 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-208ENST00000524652 NLRP2Q9NX02 1062 aa5.46□□□□□ -1.54
CSDE1-208ENST00000524652 ADGRE2Q9UHX3 823 aa5.46□□□□□ -1.54
CSDE1-208ENST00000524652 SUPT5HO00267 1087 aaKnown RBP5.45□□□□□ -1.54
CSDE1-208ENST00000524652 TMPRSS2O15393 492 aa5.45□□□□□ -1.54
CSDE1-208ENST00000524652 GSTP1P09211 210 aaKnown RBP5.45□□□□□ -1.54
CSDE1-208ENST00000524652 PPP2R3AQ06190 1150 aa5.45□□□□□ -1.54
CSDE1-208ENST00000524652 ZNF765Q7L2R6 523 aa5.45□□□□□ -1.54
CSDE1-208ENST00000524652 C1GALT1Q9NS00 363 aa5.45□□□□□ -1.54
CSDE1-208ENST00000524652 PPP4R2Q9NY27 417 aa5.45□□□□□ -1.54
CSDE1-208ENST00000524652 CRIM1Q9NZV1 1036 aa5.45□□□□□ -1.54
CSDE1-208ENST00000524652 PPP1R9AQ9ULJ8 1098 aa5.45□□□□□ -1.54
CSDE1-208ENST00000524652 DAGLAQ9Y4D2 1042 aa5.45□□□□□ -1.54
CSDE1-208ENST00000524652 SLFN14P0C7P3 912 aa5.44□□□□□ -1.54
CSDE1-208ENST00000524652 TXKP42681 527 aa5.44□□□□□ -1.54
CSDE1-208ENST00000524652 FCGRTP55899 365 aa5.44□□□□□ -1.54
CSDE1-208ENST00000524652 KIF4BQ2VIQ3 1234 aa5.44□□□□□ -1.54
CSDE1-208ENST00000524652 ABI1Q8IZP0 508 aa5.44□□□□□ -1.54
CSDE1-208ENST00000524652 ATXN3LQ9H3M9 355 aa5.44□□□□□ -1.54
CSDE1-208ENST00000524652 CCDC86Q9H6F5 360 aaKnown RBP5.44□□□□□ -1.54
CSDE1-208ENST00000524652 GOLGA2P5Q9HBQ8 144 aa5.44□□□□□ -1.54
CSDE1-208ENST00000524652 TMEM39AQ9NV64 488 aa5.44□□□□□ -1.54
CSDE1-208ENST00000524652 BIN2Q9UBW5 565 aaPredicted RBP5.44□□□□□ -1.54
CSDE1-208ENST00000524652 GPN3Q9UHW5 284 aaPredicted RBP5.44□□□□□ -1.54
CSDE1-208ENST00000524652 PCDHGC5Q9Y5F6 944 aa5.44□□□□□ -1.54
CSDE1-208ENST00000524652 DYNC1LI2O43237 492 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-208ENST00000524652 TREHO43280 583 aa5.43□□□□□ -1.54
CSDE1-208ENST00000524652 ZNF157P51786 506 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-208ENST00000524652 ID3Q02535 119 aa5.43□□□□□ -1.54
CSDE1-208ENST00000524652 DSC3Q14574 896 aa5.43□□□□□ -1.54
CSDE1-208ENST00000524652 ENOX2Q16206 610 aaKnown RBP5.43□□□□□ -1.54
CSDE1-208ENST00000524652 LCE3BQ5TA77 95 aa5.43□□□□□ -1.54
CSDE1-208ENST00000524652 OGFOD3Q6PK18 319 aa5.43□□□□□ -1.54
CSDE1-208ENST00000524652 PI16Q6UXB8 463 aa5.43□□□□□ -1.54
CSDE1-208ENST00000524652 NFXL1Q6ZNB6 911 aa5.43□□□□□ -1.54
CSDE1-208ENST00000524652 PDZD3Q86UT5 571 aa5.43□□□□□ -1.54
CSDE1-208ENST00000524652 KRTAP1-3Q8IUG1 177 aa5.43□□□□□ -1.54
CSDE1-208ENST00000524652 WDR89Q96FK6 387 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-208ENST00000524652 FANCD2OSQ96PS1 177 aa5.43□□□□□ -1.54
CSDE1-208ENST00000524652 BCO2Q9BYV7 579 aa5.43□□□□□ -1.54
CSDE1-208ENST00000524652 PIDD1Q9HB75 910 aa5.43□□□□□ -1.54
CSDE1-208ENST00000524652 PNMA6FA0A0J9YX94 578 aa5.42□□□□□ -1.54
CSDE1-208ENST00000524652 ZNF862O60290 1169 aa5.42□□□□□ -1.54
CSDE1-208ENST00000524652 LIG1P18858 919 aa5.42□□□□□ -1.54
CSDE1-208ENST00000524652 MAPK1P28482 360 aa5.42□□□□□ -1.54
CSDE1-208ENST00000524652 CYP27C1Q4G0S4 372 aa5.42□□□□□ -1.54
CSDE1-208ENST00000524652 CBLL1Q75N03 491 aa5.42□□□□□ -1.54
CSDE1-208ENST00000524652 KRTAP19-1Q8IUB9 90 aa5.42□□□□□ -1.54
CSDE1-208ENST00000524652 AGBL5Q8NDL9 886 aa5.42□□□□□ -1.54
CSDE1-208ENST00000524652 SRCIN1Q9C0H9 1055 aa5.42□□□□□ -1.54
CSDE1-208ENST00000524652 LRRC4CQ9HCJ2 640 aa5.42□□□□□ -1.54
CSDE1-208ENST00000524652 ZC3H7BQ9UGR2 993 aaKnown RBP5.42□□□□□ -1.54
CSDE1-208ENST00000524652 RNF114Q9Y508 228 aa5.42□□□□□ -1.54
CSDE1-208ENST00000524652 EIF4G1Q04637 1599 aaKnown RBP5.42□□□□□ -1.54
CSDE1-208ENST00000524652 CECR2Q9BXF3 1484 aa5.41□□□□□ -1.54
CSDE1-208ENST00000524652 SULF2Q8IWU5 870 aa5.41□□□□□ -1.54
CSDE1-208ENST00000524652 TP53INP2Q8IXH6 220 aa5.41□□□□□ -1.54
CSDE1-208ENST00000524652 SMYD4Q8IYR2 804 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-208ENST00000524652 FLCNQ8NFG4 579 aa5.41□□□□□ -1.54
CSDE1-208ENST00000524652 FBF1Q8TES7 1133 aa5.41□□□□□ -1.54
CSDE1-208ENST00000524652 ZC3H12CQ9C0D7 883 aaKnown RBP5.41□□□□□ -1.54
CSDE1-208ENST00000524652 NME2P22392 152 aa5.4□□□□□ -1.54
CSDE1-208ENST00000524652 PLCB3Q01970 1234 aa5.4□□□□□ -1.54
CSDE1-208ENST00000524652 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.4□□□□□ -1.54
CSDE1-208ENST00000524652 NXPE4Q6UWF7 544 aa5.4□□□□□ -1.54
CSDE1-208ENST00000524652 STK11IPQ8N1F8 1099 aa5.4□□□□□ -1.54
CSDE1-208ENST00000524652 C3orf58Q8NDZ4 430 aa5.4□□□□□ -1.54
CSDE1-208ENST00000524652 MISP3Q96FF7 219 aa5.4□□□□□ -1.54
CSDE1-208ENST00000524652 EMILIN2Q9BXX0 1053 aa5.4□□□□□ -1.54
CSDE1-208ENST00000524652 PAK6Q9NQU5 681 aaPredicted RBP5.4□□□□□ -1.54
CSDE1-208ENST00000524652 DISC1Q9NRI5 854 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms