RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 MAP4K1Q92918 833 aa9.05□□□□□ -0.96
CTR9-202ENST00000524523 C8orf37Q96NL8 207 aa9.05□□□□□ -0.96
CTR9-202ENST00000524523 LSG1Q9H089 658 aaKnown RBP9.05□□□□□ -0.96
CTR9-202ENST00000524523 SIL1Q9H173 461 aa9.05□□□□□ -0.96
CTR9-202ENST00000524523 ALDH8A1Q9H2A2 487 aaPredicted RBP9.05□□□□□ -0.96
CTR9-202ENST00000524523 ANO2Q9NQ90 1003 aa9.05□□□□□ -0.96
CTR9-202ENST00000524523 TRMT112Q9UI30 125 aaKnown RBP9.05□□□□□ -0.96
CTR9-202ENST00000524523 DBNLQ9UJU6 430 aaKnown RBP9.05□□□□□ -0.96
CTR9-202ENST00000524523 TRPC5Q9UL62 973 aaPredicted RBP9.05□□□□□ -0.96
CTR9-202ENST00000524523 RIPOR2Q9Y4F9 1068 aa9.05□□□□□ -0.96
CTR9-202ENST00000524523 WASF2Q9Y6W5 498 aa9.05□□□□□ -0.96
CTR9-202ENST00000524523 ZC3H4Q9UPT8 1303 aaKnown RBP9.05□□□□□ -0.96
CTR9-202ENST00000524523 RREB1Q92766 1687 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 LCE2BO14633 110 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 IRS4O14654 1257 aaPredicted RBP9.04□□□□□ -0.96
CTR9-202ENST00000524523 IGSF3O75054 1194 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 RPS6KA4O75676 772 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 CAMTA2O94983 1202 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 AVPP01185 164 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 ZFYP08048 801 aaPredicted RBP9.04□□□□□ -0.96
CTR9-202ENST00000524523 ZKSCAN1P17029 563 aaPredicted RBP9.04□□□□□ -0.96
CTR9-202ENST00000524523 NUCB2P80303 420 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 NFKBIBQ15653 356 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 HLFQ16534 295 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 CCDC158Q5M9N0 1113 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 SLC10A5Q5PT55 438 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 RNF20Q5VTR2 975 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 USPL1Q5W0Q7 1092 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 MPNDQ8N594 471 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 KBTBD3Q8NAB2 608 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 FAM89AQ96GI7 184 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 UTP14AQ9BVJ6 771 aaKnown RBP9.04□□□□□ -0.96
CTR9-202ENST00000524523 CCDC8Q9H0W5 538 aaPredicted RBP9.04□□□□□ -0.96
CTR9-202ENST00000524523 HELLSQ9NRZ9 838 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 HMG20BQ9P0W2 317 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 MROH5Q6ZUA9 1318 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 SH3TC1Q8TE82 1336 aa9.04□□□□□ -0.96
CTR9-202ENST00000524523 TUBGCP6Q96RT7 1819 aa9.03□□□□□ -0.96
CTR9-202ENST00000524523 HSP90AA1P07900 732 aaKnown RBP9.03□□□□□ -0.96
CTR9-202ENST00000524523 PSMA5P28066 241 aa9.03□□□□□ -0.96
CTR9-202ENST00000524523 ITPK1Q13572 414 aa9.03□□□□□ -0.96
CTR9-202ENST00000524523 CUL4AQ13619 759 aa9.03□□□□□ -0.96
CTR9-202ENST00000524523 KRT32Q14532 448 aa9.03□□□□□ -0.96
CTR9-202ENST00000524523 NECTIN1Q15223 517 aa9.03□□□□□ -0.96
CTR9-202ENST00000524523 CTC1Q2NKJ3 1217 aa9.03□□□□□ -0.96
CTR9-202ENST00000524523 TSHZ3Q63HK5 1081 aa9.03□□□□□ -0.96
CTR9-202ENST00000524523 PDXDC2PQ6P474 469 aa9.03□□□□□ -0.96
CTR9-202ENST00000524523 TMED8Q6PL24 325 aaPredicted RBP9.03□□□□□ -0.96
CTR9-202ENST00000524523 LDHAL6AQ6ZMR3 332 aa9.03□□□□□ -0.96
CTR9-202ENST00000524523 BANK1Q8NDB2 785 aa9.03□□□□□ -0.96
CTR9-202ENST00000524523 HMX1Q9NP08 348 aaPredicted RBP9.03□□□□□ -0.96
CTR9-202ENST00000524523 A0A1B0GUL7 405 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 ITGA6P23229 1130 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 SSFA2P28290 1259 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 NEK4P51957 841 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 TTF1Q15361 905 aaPredicted RBP9.02□□□□□ -0.97
CTR9-202ENST00000524523 CCDC152Q4G0S7 254 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 TAF7LQ5H9L4 462 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 CWC27Q6UX04 472 aaKnown RBP9.02□□□□□ -0.97
CTR9-202ENST00000524523 SH3BP5LQ7L8J4 393 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 KLHDC4Q8TBB5 520 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 CHMP4CQ96CF2 233 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 ZSCAN31Q96LW9 406 aaPredicted RBP9.02□□□□□ -0.97
CTR9-202ENST00000524523 FSD1Q9BTV5 496 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 NYXQ9GZU5 481 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 BOLA2Q9H3K6 86 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 TBC1D2BQ9UPU7 963 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 CHMP3Q9Y3E7 222 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 TLL2Q9Y6L7 1015 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 ATRNO75882 1429 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 TJP1Q07157 1748 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 CCDC171Q6TFL3 1326 aa9.02□□□□□ -0.97
CTR9-202ENST00000524523 THSD7AQ9UPZ6 1657 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 AFDNP55196 1824 aaKnown RBP9.01□□□□□ -0.97
CTR9-202ENST00000524523 MAGEB6P1A0A0J9YX57 407 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 AXIN1O15169 862 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 PDE8BO95263 885 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 UQCRFS1P1P0C7P4 283 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 ANKRD1Q15327 319 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 SF3B3Q15393 1217 aaKnown RBP9.01□□□□□ -0.97
CTR9-202ENST00000524523 MCMDC2Q4G0Z9 681 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 C4orf48Q5BLP8 95 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 VPS53Q5VIR6 699 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 ZSCAN25Q6NSZ9 544 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 SH3RF1Q7Z6J0 888 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 CRIPAKQ8N1N5 446 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 EPS8L1Q8TE68 723 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 LPIN2Q92539 896 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 ACSBG1Q96GR2 724 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 CDC5LQ99459 802 aaKnown RBP9.01□□□□□ -0.97
CTR9-202ENST00000524523 DBNDD2Q9BQY9 259 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 PAG1Q9NWQ8 432 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 NARFQ9UHQ1 456 aa9.01□□□□□ -0.97
CTR9-202ENST00000524523 ZNF330Q9Y3S2 320 aaPredicted RBP9.01□□□□□ -0.97
CTR9-202ENST00000524523 MED23Q9ULK4 1368 aa9□□□□□ -0.97
CTR9-202ENST00000524523 DOT1LQ8TEK3 1739 aa9□□□□□ -0.97
CTR9-202ENST00000524523 KCNQ2O43526 872 aa9□□□□□ -0.97
CTR9-202ENST00000524523 NTSR2O95665 410 aa9□□□□□ -0.97
CTR9-202ENST00000524523 HMGB1P09429 215 aaKnown RBP9□□□□□ -0.97
CTR9-202ENST00000524523 IFIT1P09914 478 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms