RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 GYG1P46976 350 aa8.55□□□□□ -1.04
VPS11-201ENST00000524454 GTF2IP78347 998 aa8.55□□□□□ -1.04
VPS11-201ENST00000524454 PTPN12Q05209 780 aaKnown RBP8.55□□□□□ -1.04
VPS11-201ENST00000524454 METTL24Q5JXM2 366 aa8.55□□□□□ -1.04
VPS11-201ENST00000524454 DNAJC5GQ8N7S2 189 aa8.55□□□□□ -1.04
VPS11-201ENST00000524454 OXER1Q8TDS5 423 aa8.55□□□□□ -1.04
VPS11-201ENST00000524454 SNRKQ9NRH2 765 aa8.55□□□□□ -1.04
VPS11-201ENST00000524454 MKRN1Q9UHC7 482 aaKnown RBP8.55□□□□□ -1.04
VPS11-201ENST00000524454 IQSEC3Q9UPP2 1182 aaPredicted RBP8.55□□□□□ -1.04
VPS11-201ENST00000524454 PA2G4Q9UQ80 394 aaKnown RBP8.55□□□□□ -1.04
VPS11-201ENST00000524454 RIPOR2Q9Y4F9 1068 aa8.55□□□□□ -1.04
VPS11-201ENST00000524454 AK9Q5TCS8 1911 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 ADM5C9JUS6 153 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 SASH1O94885 1247 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 MCCP23508 829 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 CHMLP26374 656 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 KIF4BQ2VIQ3 1234 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 DACT2Q5SW24 774 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 GPR153Q6NV75 609 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 PODNQ7Z5L7 613 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 KIAA0825Q8IV33 1275 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 RUFY2Q8WXA3 655 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 DPF2Q92785 391 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 EVI5LQ96CN4 794 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 ESYT1Q9BSJ8 1104 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 USP26Q9BXU7 913 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 COA1Q9GZY4 146 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 ZNF408Q9H9D4 720 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 CD209Q9NNX6 404 aa8.54□□□□□ -1.04
VPS11-201ENST00000524454 F8W031 263 aaPredicted RBP8.53□□□□□ -1.04
VPS11-201ENST00000524454 APBB1O00213 710 aa8.53□□□□□ -1.04
VPS11-201ENST00000524454 RPS12P25398 132 aaKnown RBP8.53□□□□□ -1.04
VPS11-201ENST00000524454 MCM2P49736 904 aa8.53□□□□□ -1.04
VPS11-201ENST00000524454 TTLL5Q6EMB2 1281 aa8.53□□□□□ -1.04
VPS11-201ENST00000524454 ZNF804AQ7Z570 1209 aa8.53□□□□□ -1.04
VPS11-201ENST00000524454 USP48Q86UV5 1035 aa8.53□□□□□ -1.04
VPS11-201ENST00000524454 HSCBQ8IWL3 235 aa8.53□□□□□ -1.04
VPS11-201ENST00000524454 CERS5Q8N5B7 392 aa8.53□□□□□ -1.04
VPS11-201ENST00000524454 VGLL2Q8N8G2 317 aa8.53□□□□□ -1.04
VPS11-201ENST00000524454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.53□□□□□ -1.04
VPS11-201ENST00000524454 PTCD2Q8WV60 388 aaKnown RBP8.53□□□□□ -1.04
VPS11-201ENST00000524454 KHSRPQ92945 711 aaKnown RBP eCLIP8.53□□□□□ -1.04
VPS11-201ENST00000524454 KLRG1Q96E93 195 aa8.53□□□□□ -1.04
VPS11-201ENST00000524454 FAM163AQ96GL9 167 aaPredicted RBP8.53□□□□□ -1.04
VPS11-201ENST00000524454 GMLQ99445 158 aa8.53□□□□□ -1.04
VPS11-201ENST00000524454 GGA3Q9NZ52 723 aa8.53□□□□□ -1.04
VPS11-201ENST00000524454 PCDHAC2Q9Y5I4 1007 aa8.53□□□□□ -1.04
VPS11-201ENST00000524454 ZNF609O15014 1411 aa8.53□□□□□ -1.04
VPS11-201ENST00000524454 MROH5Q6ZUA9 1318 aa8.53□□□□□ -1.04
VPS11-201ENST00000524454 ECM29Q5VYK3 1845 aa8.52□□□□□ -1.04
VPS11-201ENST00000524454 CEP350Q5VT06 3117 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 TMEM88BA6NKF7 163 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 EYA2O00167 538 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 SGSM2O43147 1006 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 USP17L8P0C7I0 530 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 ATP5JP18859 108 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 GRM1Q13255 1194 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 SCARF1Q14162 830 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 STRIP1Q5VSL9 837 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 ANGEL2Q5VTE6 544 aaKnown RBP8.52□□□□□ -1.05
VPS11-201ENST00000524454 CST9Q5W186 159 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 ATG9AQ7Z3C6 839 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 AACSQ86V21 672 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 AGBL3Q8NEM8 1001 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 FAM84BQ96KN1 310 aaPredicted RBP8.52□□□□□ -1.05
VPS11-201ENST00000524454 KIF2CQ99661 725 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 TBC1D2Q9BYX2 928 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 IL1RAPL2Q9NP60 686 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 MYOZ2Q9NPC6 264 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 ABT1Q9ULW3 272 aaKnown RBP8.52□□□□□ -1.05
VPS11-201ENST00000524454 AKAP2Q9Y2D5 859 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 PCDHGA4Q9Y5G9 962 aa8.52□□□□□ -1.05
VPS11-201ENST00000524454 TRIM6-TRIM34B2RNG4 842 aa8.51□□□□□ -1.05
VPS11-201ENST00000524454 PDE8BO95263 885 aa8.51□□□□□ -1.05
VPS11-201ENST00000524454 CELF2O95319 508 aaKnown RBP8.51□□□□□ -1.05
VPS11-201ENST00000524454 IL1R1P14778 569 aa8.51□□□□□ -1.05
VPS11-201ENST00000524454 HIBADHP31937 336 aaKnown RBP8.51□□□□□ -1.05
VPS11-201ENST00000524454 BCAMP50895 628 aa8.51□□□□□ -1.05
VPS11-201ENST00000524454 ZNF280AP59817 542 aaPredicted RBP8.51□□□□□ -1.05
VPS11-201ENST00000524454 CHAF1AQ13111 956 aaPredicted RBP8.51□□□□□ -1.05
VPS11-201ENST00000524454 UBE4AQ14139 1066 aa8.51□□□□□ -1.05
VPS11-201ENST00000524454 E2F4Q16254 413 aa8.51□□□□□ -1.05
VPS11-201ENST00000524454 GRIK5Q16478 980 aa8.51□□□□□ -1.05
VPS11-201ENST00000524454 NBPF9Q3BBW0 867 aa8.51□□□□□ -1.05
VPS11-201ENST00000524454 TNNI3KQ59H18 835 aa8.51□□□□□ -1.05
VPS11-201ENST00000524454 ARSIQ5FYB1 569 aa8.51□□□□□ -1.05
VPS11-201ENST00000524454 C15orf52Q6ZUT6 534 aaKnown RBP8.51□□□□□ -1.05
VPS11-201ENST00000524454 KCNV2Q8TDN2 545 aa8.51□□□□□ -1.05
VPS11-201ENST00000524454 EAF2Q96CJ1 260 aaPredicted RBP8.51□□□□□ -1.05
VPS11-201ENST00000524454 ZSWIM6Q9HCJ5 1215 aa8.51□□□□□ -1.05
VPS11-201ENST00000524454 PGAP2Q9UHJ9 254 aa8.51□□□□□ -1.05
VPS11-201ENST00000524454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.51□□□□□ -1.05
VPS11-201ENST00000524454 FPGT-TNNI3KV9GXZ4 949 aa8.51□□□□□ -1.05
VPS11-201ENST00000524454 COL1A1P02452 1464 aaPredicted RBP8.51□□□□□ -1.05
VPS11-201ENST00000524454 CNTNAP1P78357 1384 aa8.5□□□□□ -1.05
VPS11-201ENST00000524454 HOXB1P14653 301 aaPredicted RBP8.5□□□□□ -1.05
VPS11-201ENST00000524454 FGFR2P21802 821 aa8.5□□□□□ -1.05
VPS11-201ENST00000524454 PUM3Q15397 648 aaKnown RBP8.5□□□□□ -1.05
VPS11-201ENST00000524454 LRRFIP1Q32MZ4 808 aaKnown RBP8.5□□□□□ -1.05
VPS11-201ENST00000524454 PRAMEF18Q5VWM3 479 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms