RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 TNMDQ9H2S6 317 aa16.08■□□□□ 0.16
LDLRAD3-202ENST00000524419 DACT1Q9NYF0 836 aa16.08■□□□□ 0.16
LDLRAD3-202ENST00000524419 SRP68Q9UHB9 627 aaKnown RBP16.08■□□□□ 0.16
LDLRAD3-202ENST00000524419 SLC4A4Q9Y6R1 1079 aa16.08■□□□□ 0.16
LDLRAD3-202ENST00000524419 GSG1L2A8MUP6 293 aa16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 KDM4AO75164 1064 aa16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 CDKL5O76039 1030 aa16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 ADD1P35611 737 aaKnown RBP16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 GYG1P46976 350 aa16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 METAP2P50579 478 aaKnown RBP eCLIP16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 CLSTN2Q9H4D0 955 aa16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 USP25Q9UHP3 1055 aa16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 DENND2AQ9ULE3 1009 aa16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 MINPP1Q9UNW1 487 aa16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 RTCBQ9Y3I0 505 aaKnown RBP16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 ADCY5O95622 1261 aa16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 CYP7A1P22680 504 aa16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 CEBPZQ03701 1054 aaKnown RBP16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 CTDSPL2Q05D32 466 aa16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 SMIM5Q71RC9 77 aa16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 VPS37DQ86XT2 251 aa16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 KRT23Q9C075 422 aa16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 RCOR1Q9UKL0 485 aa16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 IQSEC3Q9UPP2 1182 aaPredicted RBP16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 COL1A1P02452 1464 aaPredicted RBP16.07■□□□□ 0.16
LDLRAD3-202ENST00000524419 CACNA1SQ13698 1873 aa16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 TMEM67Q5HYA8 995 aa16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 AKNAD1Q5T1N1 836 aa16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 CPLX2Q6PUV4 134 aaKnown RBP16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 NFXL1Q6ZNB6 911 aa16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 CELF1Q92879 486 aaKnown RBP16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 NLRP3Q96P20 1036 aa16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 RAI14Q9P0K7 980 aa16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 PRKAB2O43741 272 aa16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 RRP9O43818 475 aaKnown RBP16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 KIAA2012Q0VF49 1180 aa16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 CAMK4Q16566 473 aa16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 APOA5Q6Q788 366 aa16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 MFSD6Q6ZSS7 791 aa16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 MIGA1Q8NAN2 632 aa16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 RGS22Q8NE09 1264 aa16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 USP28Q96RU2 1077 aa16.06■□□□□ 0.16
LDLRAD3-202ENST00000524419 MAST2Q6P0Q8 1798 aa16.05■□□□□ 0.16
LDLRAD3-202ENST00000524419 ZBTB43O43298 467 aa16.05■□□□□ 0.16
LDLRAD3-202ENST00000524419 FBXO18Q8NFZ0 1043 aa16.05■□□□□ 0.16
LDLRAD3-202ENST00000524419 NKX2-3Q8TAU0 364 aa16.05■□□□□ 0.16
LDLRAD3-202ENST00000524419 IGDCC4Q8TDY8 1250 aa16.05■□□□□ 0.16
LDLRAD3-202ENST00000524419 STAG1Q8WVM7 1258 aa16.05■□□□□ 0.16
LDLRAD3-202ENST00000524419 LY9Q9HBG7 655 aa16.05■□□□□ 0.16
LDLRAD3-202ENST00000524419 ABCF2Q9UG63 623 aa16.05■□□□□ 0.16
LDLRAD3-202ENST00000524419 MAGEB6P1A0A0J9YX57 407 aa16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 NR1I2O75469 434 aa16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 RPS8P62241 208 aaKnown RBP16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 TYRO3Q06418 890 aa16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 TPTE2Q6XPS3 522 aa16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 RBM43Q6ZSC3 357 aaKnown RBP16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 BRAPQ7Z569 592 aa16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 SGMS1Q86VZ5 419 aa16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 TRPC5Q9UL62 973 aaPredicted RBP16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 GOLGA8AA7E2F4 631 aa16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 IFIT3O14879 490 aaKnown RBP16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 SEMA3EO15041 775 aa16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 LIFRP42702 1097 aa16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 FAM182BQ5T319 152 aa16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 MICU3Q86XE3 530 aa16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 FTOQ9C0B1 505 aaKnown RBP eCLIP16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 ANKRD2Q9GZV1 360 aa16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 RNF41Q9H4P4 317 aaPredicted RBP16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 R3HCC1Q9Y3T6 440 aaKnown RBP16.04■□□□□ 0.16
LDLRAD3-202ENST00000524419 TNRC6CQ9HCJ0 1690 aaKnown RBP16.03■□□□□ 0.16
LDLRAD3-202ENST00000524419 CCDC69A6NI79 296 aa16.03■□□□□ 0.16
LDLRAD3-202ENST00000524419 SART3Q15020 963 aaKnown RBP16.03■□□□□ 0.16
LDLRAD3-202ENST00000524419 OTUD7BQ6GQQ9 843 aa16.03■□□□□ 0.16
LDLRAD3-202ENST00000524419 CCDC73Q6ZRK6 1079 aa16.03■□□□□ 0.16
LDLRAD3-202ENST00000524419 RTEL1Q9NZ71 1219 aa16.03■□□□□ 0.16
LDLRAD3-202ENST00000524419 CCDC88AQ3V6T2 1871 aa16.02■□□□□ 0.16
LDLRAD3-202ENST00000524419 SYNE3Q6ZMZ3 975 aa16.02■□□□□ 0.16
LDLRAD3-202ENST00000524419 CCAR1Q8IX12 1150 aaKnown RBP16.02■□□□□ 0.16
LDLRAD3-202ENST00000524419 CKAP2LQ8IYA6 745 aa16.02■□□□□ 0.16
LDLRAD3-202ENST00000524419 ARHGEF1Q92888 912 aaKnown RBP16.02■□□□□ 0.16
LDLRAD3-202ENST00000524419 FAM84BQ96KN1 310 aaPredicted RBP16.02■□□□□ 0.16
LDLRAD3-202ENST00000524419 SENP2Q9HC62 589 aa16.02■□□□□ 0.16
LDLRAD3-202ENST00000524419 INCENPQ9NQS7 918 aa16.02■□□□□ 0.16
LDLRAD3-202ENST00000524419 TOMM22Q9NS69 142 aa16.02■□□□□ 0.16
LDLRAD3-202ENST00000524419 ZSWIM5Q9P217 1185 aa16.02■□□□□ 0.16
LDLRAD3-202ENST00000524419 SLC12A7Q9Y666 1083 aa16.02■□□□□ 0.16
LDLRAD3-202ENST00000524419 NPHP1O15259 732 aa16.02■□□□□ 0.15
LDLRAD3-202ENST00000524419 ME1P48163 572 aa16.02■□□□□ 0.15
LDLRAD3-202ENST00000524419 RRP12Q5JTH9 1297 aaKnown RBP16.02■□□□□ 0.15
LDLRAD3-202ENST00000524419 FBXO33Q7Z6M2 555 aa16.02■□□□□ 0.15
LDLRAD3-202ENST00000524419 ADGRA1Q86SQ6 560 aa16.02■□□□□ 0.15
LDLRAD3-202ENST00000524419 FAM200AQ8TCP9 573 aa16.02■□□□□ 0.15
LDLRAD3-202ENST00000524419 GJD4Q96KN9 370 aaPredicted RBP16.02■□□□□ 0.15
LDLRAD3-202ENST00000524419 ALG1Q9BT22 464 aa16.02■□□□□ 0.15
LDLRAD3-202ENST00000524419 TACC3Q9Y6A5 838 aa16.02■□□□□ 0.15
LDLRAD3-202ENST00000524419 MRVI1Q9Y6F6 885 aa16.02■□□□□ 0.15
LDLRAD3-202ENST00000524419 PDS5AQ29RF7 1337 aaKnown RBP16.01■□□□□ 0.15
LDLRAD3-202ENST00000524419 NID2Q14112 1375 aa16.01■□□□□ 0.15
LDLRAD3-202ENST00000524419 BAZ2AQ9UIF9 1905 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms