RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-208ENST00000524317 SYAP1Q96A49 352 aaPredicted RBP13.7□□□□□ -0.22
SCUBE2-208ENST00000524317 DDX11Q96FC9 970 aa13.7□□□□□ -0.22
SCUBE2-208ENST00000524317 NBPF3Q9H094 633 aa13.7□□□□□ -0.22
SCUBE2-208ENST00000524317 GPHNQ9NQX3 736 aaPredicted RBP13.7□□□□□ -0.22
SCUBE2-208ENST00000524317 AFF2P51816 1311 aa13.7□□□□□ -0.22
SCUBE2-208ENST00000524317 APPP05067 770 aa13.7□□□□□ -0.22
SCUBE2-208ENST00000524317 MCM5P33992 734 aa13.7□□□□□ -0.22
SCUBE2-208ENST00000524317 NASPP49321 788 aaPredicted RBP13.7□□□□□ -0.22
SCUBE2-208ENST00000524317 CCT2P78371 535 aaKnown RBP13.7□□□□□ -0.22
SCUBE2-208ENST00000524317 NYXQ9GZU5 481 aa13.7□□□□□ -0.22
SCUBE2-208ENST00000524317 SSUH2Q9Y2M2 353 aa13.7□□□□□ -0.22
SCUBE2-208ENST00000524317 PTPDC1A2A3K4 754 aa13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 PRC1O43663 620 aa13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 HSPA1LP34931 641 aa13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 ANTXR2P58335 489 aa13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 FAM173BQ6P4H8 233 aa13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 NBPF5PQ86XG9 351 aaPredicted RBP13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 CELF1Q92879 486 aaKnown RBP13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 NCOA5Q9HCD5 579 aaKnown RBP13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 MINPP1Q9UNW1 487 aa13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 BCORQ6W2J9 1755 aa13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 ZNF804BA4D1E1 1349 aa13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 WTIPA6NIX2 430 aaPredicted RBP13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 KIF20AO95235 890 aa13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 KRT85P78386 507 aa13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 PPP4R3BQ5MIZ7 849 aa13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 RALYLQ86SE5 291 aaKnown RBP13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 TBC1D10CQ8IV04 446 aa13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 FAM184AQ8NB25 1140 aa13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 CERKQ8TCT0 537 aa13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 RBSNQ9H1K0 784 aa13.69□□□□□ -0.22
SCUBE2-208ENST00000524317 SALL1Q9NSC2 1324 aa13.68□□□□□ -0.22
SCUBE2-208ENST00000524317 AKAP11Q9UKA4 1901 aa13.68□□□□□ -0.22
SCUBE2-208ENST00000524317 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.68□□□□□ -0.22
SCUBE2-208ENST00000524317 MBD4O95243 580 aa13.68□□□□□ -0.22
SCUBE2-208ENST00000524317 HMGN5P82970 282 aaKnown RBP13.68□□□□□ -0.22
SCUBE2-208ENST00000524317 UBE4AQ14139 1066 aa13.68□□□□□ -0.22
SCUBE2-208ENST00000524317 ZSCAN30Q86W11 494 aa13.68□□□□□ -0.22
SCUBE2-208ENST00000524317 WDR19Q8NEZ3 1342 aa13.68□□□□□ -0.22
SCUBE2-208ENST00000524317 CLSTN1O94985 981 aa13.68□□□□□ -0.22
SCUBE2-208ENST00000524317 GYG1P46976 350 aa13.68□□□□□ -0.22
SCUBE2-208ENST00000524317 SEPT12Q8IYM1 358 aa13.68□□□□□ -0.22
SCUBE2-208ENST00000524317 NLRP3Q96P20 1036 aa13.68□□□□□ -0.22
SCUBE2-208ENST00000524317 EPB41L4AQ9HCS5 686 aaPredicted RBP13.68□□□□□ -0.22
SCUBE2-208ENST00000524317 DENND2AQ9ULE3 1009 aa13.68□□□□□ -0.22
SCUBE2-208ENST00000524317 H3BQV1 296 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 ALX1Q15699 326 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 IFFO2Q5TF58 517 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 TPTE2Q6XPS3 522 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 ARMT1Q9H993 441 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 ARAP2Q8WZ64 1704 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 ZMYM6O95789 1325 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 NHSQ6T4R5 1651 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 PHF14O94880 888 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 PYGBP11216 843 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 MSNP26038 577 aaKnown RBP13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 TRDNQ13061 729 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 RESTQ13127 1097 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 TTC6Q86TZ1 520 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 CCDC24Q8N4L8 307 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 NKX2-3Q8TAU0 364 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 PRDM10Q9NQV6 1147 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 LRP2BPQ9P2M1 347 aa13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 TRPC5Q9UL62 973 aaPredicted RBP13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 IQSEC3Q9UPP2 1182 aaPredicted RBP13.67□□□□□ -0.22
SCUBE2-208ENST00000524317 LAMB2P55268 1798 aa13.66□□□□□ -0.22
SCUBE2-208ENST00000524317 SCN7AQ01118 1682 aa13.66□□□□□ -0.22
SCUBE2-208ENST00000524317 ELP1O95163 1332 aa13.66□□□□□ -0.22
SCUBE2-208ENST00000524317 CHRM1P11229 460 aaPredicted RBP13.66□□□□□ -0.22
SCUBE2-208ENST00000524317 RPS8P62241 208 aaKnown RBP13.66□□□□□ -0.22
SCUBE2-208ENST00000524317 CCDC183Q5T5S1 534 aa13.66□□□□□ -0.22
SCUBE2-208ENST00000524317 ANKRD13AQ8IZ07 590 aa13.66□□□□□ -0.22
SCUBE2-208ENST00000524317 IFNL3Q8IZI9 196 aa13.66□□□□□ -0.22
SCUBE2-208ENST00000524317 CHMP4CQ96CF2 233 aa13.66□□□□□ -0.22
SCUBE2-208ENST00000524317 KIF3AQ9Y496 699 aa13.66□□□□□ -0.22
SCUBE2-208ENST00000524317 KLF18A0A0U1RQI7 1052 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 DYNC1I1O14576 645 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 PPFIA3O75145 1194 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 CAVIN4Q5BKX8 364 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 NAA16Q6N069 864 aaPredicted RBP13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 LCORLQ8N3X6 602 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 GTPBP4Q9BZE4 634 aaKnown RBP13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 GNL3LQ9NVN8 582 aaKnown RBP13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 HPS5Q9UPZ3 1129 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 PNPLA7Q6ZV29 1317 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 GOLGA8BA8MQT2 603 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 GSG1L2A8MUP6 293 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 ZSCAN20P17040 1043 aaPredicted RBP13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 RFC4P35249 363 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 CCDC173Q0VFZ6 552 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 TRAPPC3LQ5T215 181 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 FAM196AQ6ZSG2 479 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 CYB5R4Q7L1T6 521 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 FAM84BQ96KN1 310 aaPredicted RBP13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 SCAND2PQ9GZW5 306 aaPredicted RBP13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 NAPBQ9H115 298 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 ZSCAN16Q9H4T2 348 aaPredicted RBP13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 LRRC4BQ9NT99 713 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 TMEM51Q9NW97 253 aa13.65□□□□□ -0.22
SCUBE2-208ENST00000524317 NEDD4P46934 1319 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms