RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 RABGGTAQ92696 567 aa5.72□□□□□ -1.49
CTNNA1-241ENST00000524127 SMARCC1Q92922 1105 aaPredicted RBP5.72□□□□□ -1.49
CTNNA1-241ENST00000524127 DDX11Q96FC9 970 aa5.72□□□□□ -1.49
CTNNA1-241ENST00000524127 ZNF274Q96GC6 653 aaPredicted RBP5.72□□□□□ -1.49
CTNNA1-241ENST00000524127 ZNF496Q96IT1 587 aaPredicted RBP5.72□□□□□ -1.49
CTNNA1-241ENST00000524127 XPO4Q9C0E2 1151 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-241ENST00000524127 RASSF4Q9H2L5 321 aa5.72□□□□□ -1.49
CTNNA1-241ENST00000524127 TRMT1Q9NXH9 659 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-241ENST00000524127 DBF4Q9UBU7 674 aaPredicted RBP5.72□□□□□ -1.49
CTNNA1-241ENST00000524127 SH3TC1Q8TE82 1336 aa5.72□□□□□ -1.49
CTNNA1-241ENST00000524127 PTPDC1A2A3K4 754 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 CCDC151A5D8V7 595 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 ERICH4A6NGS2 130 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 MAP2K7O14733 419 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 ARHGAP6O43182 974 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 SASH1O94885 1247 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 SMC2O95347 1197 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 TBC1D8O95759 1140 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 CMA1P23946 247 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 ME1P48163 572 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 MAP3K9P80192 1104 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 EXOSC10Q01780 885 aaKnown RBP5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 SCRN1Q12765 414 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 SMC1AQ14683 1233 aaKnown RBP5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 NCAPHQ15003 741 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 MSL1Q68DK7 614 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 Q6ZUG5 572 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 BRAPQ7Z569 592 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 HOMER1Q86YM7 354 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 VSTM4Q8IW00 320 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 REXO1L1PQ8IX06 675 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 FBXO18Q8NFZ0 1043 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 EAF2Q96CJ1 260 aaPredicted RBP5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 USP28Q96RU2 1077 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 SDF4Q9BRK5 362 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 DSCC1Q9BVC3 393 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 YY1AP1Q9H869 796 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 ARFGAP3Q9NP61 516 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 POLR3EQ9NVU0 708 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 C9orf78Q9NZ63 289 aaPredicted RBP5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 IFNKQ9P0W0 207 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 CHPF2Q9P2E5 772 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 TUBE1Q9UJT0 475 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 PARP3Q9Y6F1 533 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 KIF13BQ9NQT8 1826 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 NEDD4P46934 1319 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 MAP3K15Q6ZN16 1313 aa5.71□□□□□ -1.5
CTNNA1-241ENST00000524127 LAMB4A4D0S4 1761 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 GRM8O00222 908 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 CTDNEP1O95476 244 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 DDX58O95786 925 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 SLC3A2P08195 630 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 CYP19A1P11511 503 aaPredicted RBP5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 HSP90B1P14625 803 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 OAS2P29728 719 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 USP5P45974 858 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 CRKLP46109 303 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 PIP4K2AP48426 406 aaPredicted RBP5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 FANCCQ00597 558 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 TBX2Q13207 712 aaPredicted RBP5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 ZSCAN26Q16670 478 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 MCMDC2Q4G0Z9 681 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 NOM1Q5C9Z4 860 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 ZNF790Q6PG37 636 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 GOLGA6L1Q8N7Z2 621 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 LINC00301Q8NCQ3 95 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 NECTIN2Q92692 538 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 GOLGA1Q92805 767 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 MTFR1LQ9H019 292 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 BRMS1Q9HCU9 246 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 COPRSQ9NQ92 184 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 ST7Q9NRC1 585 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 HELLSQ9NRZ9 838 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 TFCP2L1Q9NZI6 479 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 SRP68Q9UHB9 627 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 PCDHA7Q9UN72 937 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 ZBTB1Q9Y2K1 713 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 MRFAP1Q9Y605 127 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 BRCA1P38398 1863 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 WDR19Q8NEZ3 1342 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 CNTNAP4Q9C0A0 1308 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 BCORQ6W2J9 1755 aa5.7□□□□□ -1.5
CTNNA1-241ENST00000524127 ANKRD31Q8N7Z5 1873 aa5.69□□□□□ -1.5
CTNNA1-241ENST00000524127 ZNF609O15014 1411 aa5.69□□□□□ -1.5
CTNNA1-241ENST00000524127 ZBTB22O15209 634 aa5.69□□□□□ -1.5
CTNNA1-241ENST00000524127 GNPATO15228 680 aa5.69□□□□□ -1.5
CTNNA1-241ENST00000524127 SPTLC2O15270 562 aa5.69□□□□□ -1.5
CTNNA1-241ENST00000524127 DHX16O60231 1041 aaKnown RBP5.69□□□□□ -1.5
CTNNA1-241ENST00000524127 STX10O60499 249 aa5.69□□□□□ -1.5
CTNNA1-241ENST00000524127 URI1O94763 535 aaPredicted RBP5.69□□□□□ -1.5
CTNNA1-241ENST00000524127 CYP21A2P08686 494 aa5.69□□□□□ -1.5
CTNNA1-241ENST00000524127 CASQ1P31415 396 aa5.69□□□□□ -1.5
CTNNA1-241ENST00000524127 ACTN2P35609 894 aa5.69□□□□□ -1.5
CTNNA1-241ENST00000524127 TXLNAP40222 546 aa5.69□□□□□ -1.5
CTNNA1-241ENST00000524127 MYL5Q02045 173 aa5.69□□□□□ -1.5
CTNNA1-241ENST00000524127 PPP2R3AQ06190 1150 aa5.69□□□□□ -1.5
CTNNA1-241ENST00000524127 STK3Q13188 491 aa5.69□□□□□ -1.5
CTNNA1-241ENST00000524127 STK38Q15208 465 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms