RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 STK32AQ8WU08 396 aa8.83□□□□□ -1
VPS13B-211ENST00000522802 DNMT3LQ9UJW3 386 aa8.83□□□□□ -1
VPS13B-211ENST00000522802 LTBP1Q14766 1721 aa8.83□□□□□ -1
VPS13B-211ENST00000522802 FIGNL2A6NMB9 653 aa8.82□□□□□ -1
VPS13B-211ENST00000522802 CDK2AP1O14519 115 aa8.82□□□□□ -1
VPS13B-211ENST00000522802 HSPA8P11142 646 aaKnown RBP8.82□□□□□ -1
VPS13B-211ENST00000522802 VEGFBP49765 207 aa8.82□□□□□ -1
VPS13B-211ENST00000522802 FOXK2Q01167 660 aa8.82□□□□□ -1
VPS13B-211ENST00000522802 TLR1Q15399 786 aa8.82□□□□□ -1
VPS13B-211ENST00000522802 TMEM164Q5U3C3 297 aa8.82□□□□□ -1
VPS13B-211ENST00000522802 IFNL2Q8IZJ0 200 aa8.82□□□□□ -1
VPS13B-211ENST00000522802 TSEN2Q8NCE0 465 aaKnown RBP8.82□□□□□ -1
VPS13B-211ENST00000522802 AIDAQ96BJ3 306 aa8.82□□□□□ -1
VPS13B-211ENST00000522802 SCHIP1Q9P0W5 487 aaPredicted RBP8.82□□□□□ -1
VPS13B-211ENST00000522802 IQSEC3Q9UPP2 1182 aaPredicted RBP8.82□□□□□ -1
VPS13B-211ENST00000522802 SCN7AQ01118 1682 aa8.81□□□□□ -1
VPS13B-211ENST00000522802 PASKQ96RG2 1323 aa8.81□□□□□ -1
VPS13B-211ENST00000522802 ARFGEF2Q9Y6D5 1785 aa8.81□□□□□ -1
VPS13B-211ENST00000522802 SPATA31C2B4DYI2 1134 aa8.81□□□□□ -1
VPS13B-211ENST00000522802 PPM1GO15355 546 aaPredicted RBP8.81□□□□□ -1
VPS13B-211ENST00000522802 PTCD1O75127 700 aaKnown RBP8.81□□□□□ -1
VPS13B-211ENST00000522802 LYSMD3Q7Z3D4 306 aa8.81□□□□□ -1
VPS13B-211ENST00000522802 ZNF295-AS1Q8N0V1 137 aa8.81□□□□□ -1
VPS13B-211ENST00000522802 ZSCAN10Q96SZ4 725 aaPredicted RBP8.81□□□□□ -1
VPS13B-211ENST00000522802 SCN11AQ9UI33 1791 aa8.81□□□□□ -1
VPS13B-211ENST00000522802 SCN4AP35499 1836 aa8.8□□□□□ -1
VPS13B-211ENST00000522802 MAN1A2O60476 641 aa8.8□□□□□ -1
VPS13B-211ENST00000522802 LORP23490 312 aaPredicted RBP8.8□□□□□ -1
VPS13B-211ENST00000522802 TM4SF1P30408 202 aa8.8□□□□□ -1
VPS13B-211ENST00000522802 GMPRP36959 345 aa8.8□□□□□ -1
VPS13B-211ENST00000522802 MLLT1Q03111 559 aaPredicted RBP8.8□□□□□ -1
VPS13B-211ENST00000522802 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.8□□□□□ -1
VPS13B-211ENST00000522802 USPL1Q5W0Q7 1092 aa8.8□□□□□ -1
VPS13B-211ENST00000522802 NXF1Q9UBU9 619 aaKnown RBP8.8□□□□□ -1
VPS13B-211ENST00000522802 ST20-MTHFSA0A0A6YYL1 179 aa8.79□□□□□ -1
VPS13B-211ENST00000522802 TMEM88BA6NKF7 163 aa8.79□□□□□ -1
VPS13B-211ENST00000522802 SOBPA7XYQ1 873 aa8.79□□□□□ -1
VPS13B-211ENST00000522802 NFIXQ14938 502 aa8.79□□□□□ -1
VPS13B-211ENST00000522802 SWI5Q1ZZU3 235 aa8.79□□□□□ -1
VPS13B-211ENST00000522802 WDR44Q5JSH3 913 aa8.79□□□□□ -1
VPS13B-211ENST00000522802 INTS5Q6P9B9 1019 aaKnown RBP8.79□□□□□ -1
VPS13B-211ENST00000522802 PRICKLE2Q7Z3G6 844 aa8.79□□□□□ -1
VPS13B-211ENST00000522802 C2CD5Q86YS7 1000 aa8.79□□□□□ -1
VPS13B-211ENST00000522802 HINFPQ9BQA5 517 aa8.79□□□□□ -1
VPS13B-211ENST00000522802 USP3Q9Y6I4 520 aa8.79□□□□□ -1
VPS13B-211ENST00000522802 SLX4Q8IY92 1834 aa8.79□□□□□ -1
VPS13B-211ENST00000522802 PDE4DIPQ5VU43 2346 aa8.79□□□□□ -1
VPS13B-211ENST00000522802 COL15A1P39059 1388 aa8.78□□□□□ -1
VPS13B-211ENST00000522802 CCDC85CA6NKD9 419 aa8.78□□□□□ -1
VPS13B-211ENST00000522802 ERVV-2B6SEH9 535 aa8.78□□□□□ -1
VPS13B-211ENST00000522802 DDNO94850 711 aaPredicted RBP8.78□□□□□ -1
VPS13B-211ENST00000522802 POU4F2Q12837 409 aa8.78□□□□□ -1
VPS13B-211ENST00000522802 TMEM214Q6NUQ4 689 aaKnown RBP8.78□□□□□ -1
VPS13B-211ENST00000522802 TTLL6Q8N841 843 aa8.78□□□□□ -1
VPS13B-211ENST00000522802 RHBDD1Q8TEB9 315 aa8.78□□□□□ -1
VPS13B-211ENST00000522802 SOS1Q07889 1333 aaPredicted RBP8.78□□□□□ -1
VPS13B-211ENST00000522802 WASHC2AQ641Q2 1341 aa8.78□□□□□ -1
VPS13B-211ENST00000522802 UBR2Q8IWV8 1755 aa8.77□□□□□ -1.01
VPS13B-211ENST00000522802 FAM181BA6NEQ2 426 aa8.77□□□□□ -1.01
VPS13B-211ENST00000522802 C21orf2O43822 256 aa8.77□□□□□ -1.01
VPS13B-211ENST00000522802 NBPF10Q6P3W6 841 aaKnown RBP8.77□□□□□ -1.01
VPS13B-211ENST00000522802 NBPF15Q8N660 670 aa8.77□□□□□ -1.01
VPS13B-211ENST00000522802 TSPAN10Q9H1Z9 355 aaPredicted RBP8.77□□□□□ -1.01
VPS13B-211ENST00000522802 MRC1P22897 1456 aa8.77□□□□□ -1.01
VPS13B-211ENST00000522802 GTF2E1P29083 439 aaPredicted RBP8.76□□□□□ -1.01
VPS13B-211ENST00000522802 WEE1P30291 646 aa8.76□□□□□ -1.01
VPS13B-211ENST00000522802 RGS19P49795 217 aa8.76□□□□□ -1.01
VPS13B-211ENST00000522802 CABP4P57796 275 aa8.76□□□□□ -1.01
VPS13B-211ENST00000522802 EIF4A2Q14240 407 aaKnown RBP8.76□□□□□ -1.01
VPS13B-211ENST00000522802 C4orf17Q53FE4 359 aa8.76□□□□□ -1.01
VPS13B-211ENST00000522802 TAS1R3Q7RTX0 852 aa8.76□□□□□ -1.01
VPS13B-211ENST00000522802 LDHDQ86WU2 507 aa8.76□□□□□ -1.01
VPS13B-211ENST00000522802 SLC9A9Q8IVB4 645 aa8.76□□□□□ -1.01
VPS13B-211ENST00000522802 ZSCAN1Q8NBB4 408 aa8.76□□□□□ -1.01
VPS13B-211ENST00000522802 RETREG2Q8NC44 543 aa8.76□□□□□ -1.01
VPS13B-211ENST00000522802 GAS2L2Q8NHY3 880 aa8.76□□□□□ -1.01
VPS13B-211ENST00000522802 ZNF541Q9H0D2 1346 aa8.76□□□□□ -1.01
VPS13B-211ENST00000522802 RASSF10A6NK89 507 aa8.75□□□□□ -1.01
VPS13B-211ENST00000522802 LGR5O75473 907 aa8.75□□□□□ -1.01
VPS13B-211ENST00000522802 SERPINB2P05120 415 aa8.75□□□□□ -1.01
VPS13B-211ENST00000522802 TEAD4Q15561 434 aa8.75□□□□□ -1.01
VPS13B-211ENST00000522802 GNASQ5JWF2 1037 aa8.75□□□□□ -1.01
VPS13B-211ENST00000522802 TBCELQ5QJ74 424 aa8.75□□□□□ -1.01
VPS13B-211ENST00000522802 ZNF530Q6P9A1 599 aaPredicted RBP8.75□□□□□ -1.01
VPS13B-211ENST00000522802 DNAJC10Q8IXB1 793 aa8.75□□□□□ -1.01
VPS13B-211ENST00000522802 CLP1Q92989 425 aaKnown RBP8.75□□□□□ -1.01
VPS13B-211ENST00000522802 NIFKQ9BYG3 293 aaKnown RBP8.75□□□□□ -1.01
VPS13B-211ENST00000522802 TAOK3Q9H2K8 898 aa8.75□□□□□ -1.01
VPS13B-211ENST00000522802 TAF1DQ9H5J8 278 aaPredicted RBP8.75□□□□□ -1.01
VPS13B-211ENST00000522802 USTQ9Y2C2 406 aa8.75□□□□□ -1.01
VPS13B-211ENST00000522802 BCORQ6W2J9 1755 aa8.75□□□□□ -1.01
VPS13B-211ENST00000522802 WDR33Q9C0J8 1336 aaKnown RBP8.75□□□□□ -1.01
VPS13B-211ENST00000522802 LTBP3Q9NS15 1303 aa8.75□□□□□ -1.01
VPS13B-211ENST00000522802 H0YIN7 160 aa8.74□□□□□ -1.01
VPS13B-211ENST00000522802 RHOQP17081 205 aa8.74□□□□□ -1.01
VPS13B-211ENST00000522802 OCLNQ16625 522 aa8.74□□□□□ -1.01
VPS13B-211ENST00000522802 EAPPQ56P03 285 aaPredicted RBP8.74□□□□□ -1.01
VPS13B-211ENST00000522802 STAG2Q8N3U4 1231 aa8.74□□□□□ -1.01
VPS13B-211ENST00000522802 SCG3Q8WXD2 468 aaKnown RBP8.74□□□□□ -1.01
VPS13B-211ENST00000522802 IRF7Q92985 503 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms