RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 RTKN2Q8IZC4 609 aa8.29□□□□□ -1.08
PABPC1-220ENST00000522658 JDP2Q8WYK2 163 aa8.29□□□□□ -1.08
PABPC1-220ENST00000522658 GRIP2Q9C0E4 1043 aa8.29□□□□□ -1.08
PABPC1-220ENST00000522658 ABT1Q9ULW3 272 aaKnown RBP8.29□□□□□ -1.08
PABPC1-220ENST00000522658 NUDCQ9Y266 331 aa8.29□□□□□ -1.08
PABPC1-220ENST00000522658 FAM177BA6PVY3 158 aa8.28□□□□□ -1.08
PABPC1-220ENST00000522658 FOXN1O15353 648 aa8.28□□□□□ -1.08
PABPC1-220ENST00000522658 TRAK2O60296 914 aa8.28□□□□□ -1.08
PABPC1-220ENST00000522658 IRS1P35568 1242 aa8.28□□□□□ -1.08
PABPC1-220ENST00000522658 SCTRP47872 440 aa8.28□□□□□ -1.08
PABPC1-220ENST00000522658 EIF6P56537 245 aaKnown RBP8.28□□□□□ -1.08
PABPC1-220ENST00000522658 FKBP4Q02790 459 aaKnown RBP eCLIP8.28□□□□□ -1.08
PABPC1-220ENST00000522658 NR1H3Q13133 447 aa8.28□□□□□ -1.08
PABPC1-220ENST00000522658 RNF20Q5VTR2 975 aa8.28□□□□□ -1.08
PABPC1-220ENST00000522658 TPTE2Q6XPS3 522 aa8.28□□□□□ -1.08
PABPC1-220ENST00000522658 IL27Q8NEV9 243 aa8.28□□□□□ -1.08
PABPC1-220ENST00000522658 TAF1DQ9H5J8 278 aaPredicted RBP8.28□□□□□ -1.08
PABPC1-220ENST00000522658 PRDM10Q9NQV6 1147 aa8.28□□□□□ -1.08
PABPC1-220ENST00000522658 DYRK1BQ9Y463 629 aa8.28□□□□□ -1.08
PABPC1-220ENST00000522658 DICER1Q9UPY3 1922 aaKnown RBP8.28□□□□□ -1.08
PABPC1-220ENST00000522658 FER1L6Q2WGJ9 1857 aa8.28□□□□□ -1.08
PABPC1-220ENST00000522658 ANKRD31Q8N7Z5 1873 aa8.28□□□□□ -1.08
PABPC1-220ENST00000522658 BCORQ6W2J9 1755 aa8.27□□□□□ -1.08
PABPC1-220ENST00000522658 ARFGEF2Q9Y6D5 1785 aa8.27□□□□□ -1.08
PABPC1-220ENST00000522658 MEN1O00255 615 aa8.27□□□□□ -1.09
PABPC1-220ENST00000522658 CAMTA2O94983 1202 aa8.27□□□□□ -1.09
PABPC1-220ENST00000522658 A1BGP04217 495 aa8.27□□□□□ -1.09
PABPC1-220ENST00000522658 SRGNP10124 158 aa8.27□□□□□ -1.09
PABPC1-220ENST00000522658 ALDH1B1P30837 517 aa8.27□□□□□ -1.09
PABPC1-220ENST00000522658 EPHX2P34913 555 aa8.27□□□□□ -1.09
PABPC1-220ENST00000522658 MCCD1P59942 119 aaPredicted RBP8.27□□□□□ -1.09
PABPC1-220ENST00000522658 MAP2K1Q02750 393 aaPredicted RBP8.27□□□□□ -1.09
PABPC1-220ENST00000522658 GRM1Q13255 1194 aa8.27□□□□□ -1.09
PABPC1-220ENST00000522658 CLN3Q13286 438 aa8.27□□□□□ -1.09
PABPC1-220ENST00000522658 KANK3Q6NY19 840 aa8.27□□□□□ -1.09
PABPC1-220ENST00000522658 RPGRQ92834 1020 aaKnown RBP8.27□□□□□ -1.09
PABPC1-220ENST00000522658 NYXQ9GZU5 481 aa8.27□□□□□ -1.09
PABPC1-220ENST00000522658 OSBPL3Q9H4L5 887 aa8.27□□□□□ -1.09
PABPC1-220ENST00000522658 ZNF277Q9NRM2 450 aaPredicted RBP8.27□□□□□ -1.09
PABPC1-220ENST00000522658 MBIPQ9NS73 344 aa8.27□□□□□ -1.09
PABPC1-220ENST00000522658 NIP7Q9Y221 180 aaKnown RBP eCLIP8.27□□□□□ -1.09
PABPC1-220ENST00000522658 DNMT3AQ9Y6K1 912 aaPredicted RBP8.27□□□□□ -1.09
PABPC1-220ENST00000522658 RNF123Q5XPI4 1314 aa8.27□□□□□ -1.09
PABPC1-220ENST00000522658 SCN4AP35499 1836 aa8.26□□□□□ -1.09
PABPC1-220ENST00000522658 SPATA31C2B4DYI2 1134 aa8.26□□□□□ -1.09
PABPC1-220ENST00000522658 GPR25O00155 361 aa8.26□□□□□ -1.09
PABPC1-220ENST00000522658 SNRPA1P09661 255 aaKnown RBP8.26□□□□□ -1.09
PABPC1-220ENST00000522658 ECE1P42892 770 aa8.26□□□□□ -1.09
PABPC1-220ENST00000522658 MARSP56192 900 aaKnown RBP8.26□□□□□ -1.09
PABPC1-220ENST00000522658 POU4F2Q12837 409 aa8.26□□□□□ -1.09
PABPC1-220ENST00000522658 CLEC4GQ6UXB4 293 aa8.26□□□□□ -1.09
PABPC1-220ENST00000522658 KIF6Q6ZMV9 814 aa8.26□□□□□ -1.09
PABPC1-220ENST00000522658 BANK1Q8NDB2 785 aa8.26□□□□□ -1.09
PABPC1-220ENST00000522658 SCARF2Q96GP6 870 aaPredicted RBP8.26□□□□□ -1.09
PABPC1-220ENST00000522658 GJA3Q9Y6H8 435 aa8.26□□□□□ -1.09
PABPC1-220ENST00000522658 KIF7Q2M1P5 1343 aa8.26□□□□□ -1.09
PABPC1-220ENST00000522658 PRKAR2BP31323 418 aa8.25□□□□□ -1.09
PABPC1-220ENST00000522658 IARSP41252 1262 aaKnown RBP8.25□□□□□ -1.09
PABPC1-220ENST00000522658 PIP4K2AP48426 406 aaPredicted RBP8.25□□□□□ -1.09
PABPC1-220ENST00000522658 LBX1P52954 281 aa8.25□□□□□ -1.09
PABPC1-220ENST00000522658 NEUROD2Q15784 382 aa8.25□□□□□ -1.09
PABPC1-220ENST00000522658 DEFB115Q30KQ5 88 aa8.25□□□□□ -1.09
PABPC1-220ENST00000522658 CYP2U1Q7Z449 544 aa8.25□□□□□ -1.09
PABPC1-220ENST00000522658 MTMR14Q8NCE2 650 aa8.25□□□□□ -1.09
PABPC1-220ENST00000522658 ZNF541Q9H0D2 1346 aa8.25□□□□□ -1.09
PABPC1-220ENST00000522658 SLX4Q8IY92 1834 aa8.24□□□□□ -1.09
PABPC1-220ENST00000522658 PCNTO95613 3336 aa8.24□□□□□ -1.09
PABPC1-220ENST00000522658 MAP3K10Q02779 954 aa8.24□□□□□ -1.09
PABPC1-220ENST00000522658 WDR44Q5JSH3 913 aa8.24□□□□□ -1.09
PABPC1-220ENST00000522658 MAP1SQ66K74 1059 aaPredicted RBP8.24□□□□□ -1.09
PABPC1-220ENST00000522658 NBPF10Q6P3W6 841 aaKnown RBP8.24□□□□□ -1.09
PABPC1-220ENST00000522658 NIM1KQ8IY84 436 aa8.24□□□□□ -1.09
PABPC1-220ENST00000522658 CNTROBQ8N137 903 aa8.24□□□□□ -1.09
PABPC1-220ENST00000522658 GPC2Q8N158 579 aa8.24□□□□□ -1.09
PABPC1-220ENST00000522658 NBPF15Q8N660 670 aa8.24□□□□□ -1.09
PABPC1-220ENST00000522658 IL17REQ8NFR9 667 aa8.24□□□□□ -1.09
PABPC1-220ENST00000522658 PASKQ96RG2 1323 aa8.24□□□□□ -1.09
PABPC1-220ENST00000522658 WDR33Q9C0J8 1336 aaKnown RBP8.24□□□□□ -1.09
PABPC1-220ENST00000522658 SIPA1L3O60292 1781 aaPredicted RBP8.23□□□□□ -1.09
PABPC1-220ENST00000522658 H7C1W4 665 aa8.23□□□□□ -1.09
PABPC1-220ENST00000522658 U2AF1L5P0DN76 240 aaPredicted RBP8.23□□□□□ -1.09
PABPC1-220ENST00000522658 U2AF1Q01081 240 aaKnown RBP eCLIP8.23□□□□□ -1.09
PABPC1-220ENST00000522658 RIPOR1Q6ZS17 1223 aa8.23□□□□□ -1.09
PABPC1-220ENST00000522658 SYNE4Q8N205 404 aa8.23□□□□□ -1.09
PABPC1-220ENST00000522658 LARGE2Q8N3Y3 721 aa8.23□□□□□ -1.09
PABPC1-220ENST00000522658 NGEFQ8N5V2 710 aa8.23□□□□□ -1.09
PABPC1-220ENST00000522658 GTPBP3Q969Y2 492 aaKnown RBP8.23□□□□□ -1.09
PABPC1-220ENST00000522658 NLRP3Q96P20 1036 aa8.23□□□□□ -1.09
PABPC1-220ENST00000522658 PCDHB11Q9Y5F2 797 aa8.23□□□□□ -1.09
PABPC1-220ENST00000522658 CEMIPQ8WUJ3 1361 aa8.22□□□□□ -1.09
PABPC1-220ENST00000522658 COL3A1P02461 1466 aaPredicted RBP8.22□□□□□ -1.09
PABPC1-220ENST00000522658 RASSF10A6NK89 507 aa8.22□□□□□ -1.09
PABPC1-220ENST00000522658 CCDC85CA6NKD9 419 aa8.22□□□□□ -1.09
PABPC1-220ENST00000522658 FOXR1Q6PIV2 292 aa8.22□□□□□ -1.09
PABPC1-220ENST00000522658 MCM10Q7L590 875 aa8.22□□□□□ -1.09
PABPC1-220ENST00000522658 ZNF592Q92610 1267 aa8.22□□□□□ -1.09
PABPC1-220ENST00000522658 ABHD8Q96I13 439 aa8.22□□□□□ -1.09
PABPC1-220ENST00000522658 RBM17Q96I25 401 aaKnown RBP8.22□□□□□ -1.09
PABPC1-220ENST00000522658 PSMD1Q99460 953 aa8.22□□□□□ -1.09
PABPC1-220ENST00000522658 ARHGEF10LQ9HCE6 1279 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms