RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 MAGEB6P1A0A0J9YX57 407 aa15.64■□□□□ 0.09
CPNE3-205ENST00000522240 MBD4O95243 580 aa15.64■□□□□ 0.09
CPNE3-205ENST00000522240 SBF1O95248 1867 aa15.64■□□□□ 0.09
CPNE3-205ENST00000522240 RIOK1Q9BRS2 568 aaKnown RBP15.64■□□□□ 0.09
CPNE3-205ENST00000522240 VIL1P09327 827 aaKnown RBP15.63■□□□□ 0.09
CPNE3-205ENST00000522240 HSPD1P10809 573 aaKnown RBP15.63■□□□□ 0.09
CPNE3-205ENST00000522240 HDLBPQ00341 1268 aaKnown RBP15.63■□□□□ 0.09
CPNE3-205ENST00000522240 PTH1RQ03431 593 aa15.63■□□□□ 0.09
CPNE3-205ENST00000522240 ADGRA1Q86SQ6 560 aa15.63■□□□□ 0.09
CPNE3-205ENST00000522240 IL17RAQ96F46 866 aa15.63■□□□□ 0.09
CPNE3-205ENST00000522240 STRBPQ96SI9 672 aaKnown RBP15.63■□□□□ 0.09
CPNE3-205ENST00000522240 RBM8AQ9Y5S9 174 aaKnown RBP15.63■□□□□ 0.09
CPNE3-205ENST00000522240 LMNB1P20700 586 aa15.62■□□□□ 0.09
CPNE3-205ENST00000522240 HSPA4P34932 840 aa15.62■□□□□ 0.09
CPNE3-205ENST00000522240 PRELPP51888 382 aa15.62■□□□□ 0.09
CPNE3-205ENST00000522240 ANAPC15P60006 121 aa15.62■□□□□ 0.09
CPNE3-205ENST00000522240 PPP4CP60510 307 aa15.62■□□□□ 0.09
CPNE3-205ENST00000522240 GSE1Q14687 1217 aa15.62■□□□□ 0.09
CPNE3-205ENST00000522240 RSBN1LQ6PCB5 846 aaPredicted RBP15.62■□□□□ 0.09
CPNE3-205ENST00000522240 LCORLQ8N3X6 602 aa15.62■□□□□ 0.09
CPNE3-205ENST00000522240 MIGA1Q8NAN2 632 aa15.62■□□□□ 0.09
CPNE3-205ENST00000522240 NOL10Q9BSC4 688 aaKnown RBP15.62■□□□□ 0.09
CPNE3-205ENST00000522240 MRIQ9BWK5 157 aa15.62■□□□□ 0.09
CPNE3-205ENST00000522240 KCNQ5Q9NR82 932 aa15.62■□□□□ 0.09
CPNE3-205ENST00000522240 TTF2Q9UNY4 1162 aaKnown RBP15.62■□□□□ 0.09
CPNE3-205ENST00000522240 DDX60LQ5H9U9 1706 aaKnown RBP15.62■□□□□ 0.09
CPNE3-205ENST00000522240 ADAMTSL1Q8N6G6 1762 aa15.62■□□□□ 0.09
CPNE3-205ENST00000522240 FOCADQ5VW36 1801 aa15.61■□□□□ 0.09
CPNE3-205ENST00000522240 FZD9O00144 591 aa15.61■□□□□ 0.09
CPNE3-205ENST00000522240 PSMD14O00487 310 aa15.61■□□□□ 0.09
CPNE3-205ENST00000522240 FOXP2O15409 715 aa15.61■□□□□ 0.09
CPNE3-205ENST00000522240 BAG3O95817 575 aa15.61■□□□□ 0.09
CPNE3-205ENST00000522240 DIXDC1Q155Q3 683 aa15.61■□□□□ 0.09
CPNE3-205ENST00000522240 CIAPIN1Q6FI81 312 aa15.61■□□□□ 0.09
CPNE3-205ENST00000522240 ARHGAP27Q6ZUM4 889 aa15.61■□□□□ 0.09
CPNE3-205ENST00000522240 KCNB2Q92953 911 aa15.61■□□□□ 0.09
CPNE3-205ENST00000522240 ARMT1Q9H993 441 aa15.61■□□□□ 0.09
CPNE3-205ENST00000522240 CLEC11AQ9Y240 323 aa15.61■□□□□ 0.09
CPNE3-205ENST00000522240 LAMB1P07942 1786 aa15.61■□□□□ 0.09
CPNE3-205ENST00000522240 NAV1Q8NEY1 1877 aa15.61■□□□□ 0.09
CPNE3-205ENST00000522240 GPR75-ASB3A0A0A6YYF3 556 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 RAD17O75943 681 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 PLCG2P16885 1265 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 MMP14P50281 582 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 CXCL9Q07325 125 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 TNIP1Q15025 636 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 NECTIN1Q15223 517 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 ALX1Q15699 326 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 VPS53Q5VIR6 699 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 RNF20Q5VTR2 975 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 HHIPL2Q6UWX4 724 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 AGBL3Q8NEM8 1001 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 TEKT1Q969V4 418 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 GMLQ99445 158 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 MXD3Q9BW11 206 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 CRNKL1Q9BZJ0 848 aaKnown RBP15.6■□□□□ 0.09
CPNE3-205ENST00000522240 CTNNA3Q9UI47 895 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 SERPINA10Q9UK55 444 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 DAGLAQ9Y4D2 1042 aa15.6■□□□□ 0.09
CPNE3-205ENST00000522240 CDK5RAP2Q96SN8 1893 aa15.59■□□□□ 0.09
CPNE3-205ENST00000522240 PATL2C9JE40 543 aaKnown RBP15.59■□□□□ 0.09
CPNE3-205ENST00000522240 RPS12P25398 132 aaKnown RBP15.59■□□□□ 0.09
CPNE3-205ENST00000522240 BTDP43251 543 aa15.59■□□□□ 0.09
CPNE3-205ENST00000522240 EIF6P56537 245 aaKnown RBP15.59■□□□□ 0.09
CPNE3-205ENST00000522240 GIMAP6Q6P9H5 292 aa15.59■□□□□ 0.09
CPNE3-205ENST00000522240 ZNF526Q8TF50 670 aaPredicted RBP15.59■□□□□ 0.09
CPNE3-205ENST00000522240 AATFQ9NY61 560 aaKnown RBP eCLIP15.59■□□□□ 0.09
CPNE3-205ENST00000522240 RBM19Q9Y4C8 960 aaKnown RBP15.59■□□□□ 0.09
CPNE3-205ENST00000522240 ECM29Q5VYK3 1845 aa15.59■□□□□ 0.09
CPNE3-205ENST00000522240 GSG1L2A8MUP6 293 aa15.58■□□□□ 0.08
CPNE3-205ENST00000522240 KIF3CO14782 793 aa15.58■□□□□ 0.08
CPNE3-205ENST00000522240 PRR29P0C7W0 189 aa15.58■□□□□ 0.08
CPNE3-205ENST00000522240 DYNLL1P63167 89 aaKnown RBP15.58■□□□□ 0.08
CPNE3-205ENST00000522240 CREB3L3Q68CJ9 461 aa15.58■□□□□ 0.08
CPNE3-205ENST00000522240 KIAA0825Q8IV33 1275 aa15.58■□□□□ 0.08
CPNE3-205ENST00000522240 ZDHHC15Q96MV8 337 aa15.58■□□□□ 0.08
CPNE3-205ENST00000522240 NACAP1Q9BZK3 213 aa15.58■□□□□ 0.08
CPNE3-205ENST00000522240 EPB41L4AQ9HCS5 686 aaPredicted RBP15.58■□□□□ 0.08
CPNE3-205ENST00000522240 HDAC9Q9UKV0 1011 aa15.58■□□□□ 0.08
CPNE3-205ENST00000522240 SLC4A4Q9Y6R1 1079 aa15.58■□□□□ 0.08
CPNE3-205ENST00000522240 F8W031 263 aaPredicted RBP15.57■□□□□ 0.08
CPNE3-205ENST00000522240 SLC27A2O14975 620 aa15.57■□□□□ 0.08
CPNE3-205ENST00000522240 ZKSCAN1P17029 563 aaPredicted RBP15.57■□□□□ 0.08
CPNE3-205ENST00000522240 CRKP46108 304 aa15.57■□□□□ 0.08
CPNE3-205ENST00000522240 TSGA10IPQ3SY00 556 aa15.57■□□□□ 0.08
CPNE3-205ENST00000522240 SPRYD3Q8NCJ5 442 aa15.57■□□□□ 0.08
CPNE3-205ENST00000522240 IL27Q8NEV9 243 aa15.57■□□□□ 0.08
CPNE3-205ENST00000522240 ATP8A2Q9NTI2 1148 aa15.57■□□□□ 0.08
CPNE3-205ENST00000522240 PALD1Q9ULE6 856 aa15.57■□□□□ 0.08
CPNE3-205ENST00000522240 FGAP02671 866 aa15.56■□□□□ 0.08
CPNE3-205ENST00000522240 SCNN1DP51172 638 aa15.56■□□□□ 0.08
CPNE3-205ENST00000522240 KRT32Q14532 448 aa15.56■□□□□ 0.08
CPNE3-205ENST00000522240 IMMTQ16891 758 aaKnown RBP15.56■□□□□ 0.08
CPNE3-205ENST00000522240 IFNL3Q8IZI9 196 aa15.56■□□□□ 0.08
CPNE3-205ENST00000522240 KIF2CQ99661 725 aa15.56■□□□□ 0.08
CPNE3-205ENST00000522240 NAPBQ9H115 298 aa15.56■□□□□ 0.08
CPNE3-205ENST00000522240 SNX14Q9Y5W7 946 aa15.56■□□□□ 0.08
CPNE3-205ENST00000522240 ZC3H4Q9UPT8 1303 aaKnown RBP15.56■□□□□ 0.08
CPNE3-205ENST00000522240 ZNF541Q9H0D2 1346 aa15.55■□□□□ 0.08
CPNE3-205ENST00000522240 PRKAB2O43741 272 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms