RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 RGMBQ6NW40 437 aa6.85□□□□□ -1.31
CTNNA1-232ENST00000522013 ZNF530Q6P9A1 599 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-232ENST00000522013 TRMT44Q8IYL2 757 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-232ENST00000522013 RTKN2Q8IZC4 609 aa6.85□□□□□ -1.31
CTNNA1-232ENST00000522013 CXXC1Q9P0U4 656 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-232ENST00000522013 BRCA2P51587 3418 aa6.85□□□□□ -1.31
CTNNA1-232ENST00000522013 KIF24Q5T7B8 1368 aa6.84□□□□□ -1.31
CTNNA1-232ENST00000522013 UNCXA6NJT0 531 aa6.84□□□□□ -1.31
CTNNA1-232ENST00000522013 FAM155AB1AL88 458 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-232ENST00000522013 CANXP27824 592 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-232ENST00000522013 SCTRP47872 440 aa6.84□□□□□ -1.31
CTNNA1-232ENST00000522013 SKOR1P84550 965 aa6.84□□□□□ -1.31
CTNNA1-232ENST00000522013 NBPF20Q3BBV1 942 aa6.84□□□□□ -1.31
CTNNA1-232ENST00000522013 FBXO46Q6PJ61 603 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-232ENST00000522013 C1orf216Q8TAB5 229 aa6.84□□□□□ -1.31
CTNNA1-232ENST00000522013 ADARB2Q9NS39 739 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-232ENST00000522013 WASHC2AQ641Q2 1341 aa6.83□□□□□ -1.32
CTNNA1-232ENST00000522013 ST20-MTHFSA0A0A6YYL1 179 aa6.83□□□□□ -1.32
CTNNA1-232ENST00000522013 MTHFSP49914 203 aa6.83□□□□□ -1.32
CTNNA1-232ENST00000522013 ZNF211Q13398 564 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-232ENST00000522013 C1orf141Q5JVX7 400 aa6.83□□□□□ -1.32
CTNNA1-232ENST00000522013 RNF20Q5VTR2 975 aa6.83□□□□□ -1.32
CTNNA1-232ENST00000522013 TAS1R3Q7RTX0 852 aa6.83□□□□□ -1.32
CTNNA1-232ENST00000522013 GAS2L2Q8NHY3 880 aa6.83□□□□□ -1.32
CTNNA1-232ENST00000522013 ZNF296Q8WUU4 475 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-232ENST00000522013 PURBQ96QR8 312 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-232ENST00000522013 FYB1O15117 783 aa6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 TBC1D8O95759 1140 aa6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 CYP19A1P11511 503 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 TRIM32Q13049 653 aa6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 INTS6LQ5JSJ4 861 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 CAPN12Q6ZSI9 719 aa6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 CDC37L1Q7L3B6 337 aa6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 C2orf69Q8N8R5 385 aa6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 TSEN2Q8NCE0 465 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 C7orf43Q8WVR3 580 aa6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 CSRNP1Q96S65 589 aa6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 KCTD15Q96SI1 283 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 SETDB2Q96T68 719 aa6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 GBA2Q9HCG7 927 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 GPRC5DQ9NZD1 345 aa6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 HTTP42858 3142 aa6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 UNC80Q8N2C7 3258 aa6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 LAMB4A4D0S4 1761 aa6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 UBR2Q8IWV8 1755 aa6.82□□□□□ -1.32
CTNNA1-232ENST00000522013 A0A087WZG4 1122 aa6.81□□□□□ -1.32
CTNNA1-232ENST00000522013 STAU1O95793 577 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-232ENST00000522013 NPR1P16066 1061 aa6.81□□□□□ -1.32
CTNNA1-232ENST00000522013 USP4Q13107 963 aa6.81□□□□□ -1.32
CTNNA1-232ENST00000522013 PLEKHO1Q53GL0 409 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-232ENST00000522013 DLK2Q6UY11 383 aa6.81□□□□□ -1.32
CTNNA1-232ENST00000522013 USP48Q86UV5 1035 aa6.81□□□□□ -1.32
CTNNA1-232ENST00000522013 NIM1KQ8IY84 436 aa6.81□□□□□ -1.32
CTNNA1-232ENST00000522013 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.81□□□□□ -1.32
CTNNA1-232ENST00000522013 MKNK1Q9BUB5 465 aa6.81□□□□□ -1.32
CTNNA1-232ENST00000522013 ANO2Q9NQ90 1003 aa6.81□□□□□ -1.32
CTNNA1-232ENST00000522013 SEPT3Q9UH03 358 aa6.81□□□□□ -1.32
CTNNA1-232ENST00000522013 RNF223E7ERA6 249 aa6.8□□□□□ -1.32
CTNNA1-232ENST00000522013 E9PSI1 815 aa6.8□□□□□ -1.32
CTNNA1-232ENST00000522013 H0YGN5 161 aa6.8□□□□□ -1.32
CTNNA1-232ENST00000522013 ERVH48-1M5A8F1 160 aa6.8□□□□□ -1.32
CTNNA1-232ENST00000522013 EN2P19622 333 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-232ENST00000522013 SLC39A6Q13433 755 aa6.8□□□□□ -1.32
CTNNA1-232ENST00000522013 NBPF5PQ86XG9 351 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-232ENST00000522013 PSMD1Q99460 953 aa6.8□□□□□ -1.32
CTNNA1-232ENST00000522013 BCL2L13Q9BXK5 485 aa6.8□□□□□ -1.32
CTNNA1-232ENST00000522013 COL25A1Q9BXS0 654 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-232ENST00000522013 CDV3Q9UKY7 258 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-232ENST00000522013 FAM177BA6PVY3 158 aa6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 TMEM229AB2RXF0 380 aa6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 H3BRB1 525 aa6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 ABL1P00519 1130 aa6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 WEE1P30291 646 aa6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 GMPSP49915 693 aaPredicted RBP6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 FKBP5Q13451 457 aaPredicted RBP6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 ECM1Q16610 540 aa6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 INTS3Q68E01 1043 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 MPNDQ8N594 471 aa6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 TRPM4Q8TD43 1214 aa6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 L3MBTL2Q969R5 705 aa6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 HINFPQ9BQA5 517 aa6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 TUT1Q9H6E5 874 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 ZNF358Q9NW07 568 aa6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 BIN2Q9UBW5 565 aaPredicted RBP6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 RBM19Q9Y4C8 960 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 RANBP2P49792 3224 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-232ENST00000522013 RBM47A0AV96 593 aaKnown RBP6.78□□□□□ -1.32
CTNNA1-232ENST00000522013 GPR25O00155 361 aa6.78□□□□□ -1.32
CTNNA1-232ENST00000522013 PPIP5K2O43314 1243 aa6.78□□□□□ -1.32
CTNNA1-232ENST00000522013 ALDH1B1P30837 517 aa6.78□□□□□ -1.32
CTNNA1-232ENST00000522013 MARSP56192 900 aaKnown RBP6.78□□□□□ -1.32
CTNNA1-232ENST00000522013 MTMR3Q13615 1198 aa6.78□□□□□ -1.32
CTNNA1-232ENST00000522013 VASH1Q7L8A9 365 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-232ENST00000522013 KRT26Q7Z3Y9 468 aa6.78□□□□□ -1.32
CTNNA1-232ENST00000522013 CARD11Q9BXL7 1154 aa6.78□□□□□ -1.32
CTNNA1-232ENST00000522013 PCGF6Q9BYE7 350 aa6.78□□□□□ -1.32
CTNNA1-232ENST00000522013 TMPRSS4Q9NRS4 437 aa6.78□□□□□ -1.32
CTNNA1-232ENST00000522013 EGFL7Q9UHF1 273 aa6.78□□□□□ -1.32
CTNNA1-232ENST00000522013 MAP4K5Q9Y4K4 846 aa6.78□□□□□ -1.32
CTNNA1-232ENST00000522013 TRIM17Q9Y577 477 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms