RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ATP2B4P23634 1241 aa18.34■□□□□ 0.53
USP42-207ENST00000521713 USP26Q9BXU7 913 aa18.34■□□□□ 0.53
USP42-207ENST00000521713 ANKRD62A6NC57 917 aa18.34■□□□□ 0.53
USP42-207ENST00000521713 IFFO1Q0D2I5 559 aa18.34■□□□□ 0.53
USP42-207ENST00000521713 TTLL7Q6ZT98 887 aa18.34■□□□□ 0.53
USP42-207ENST00000521713 V9GYY5 206 aaPredicted RBP18.34■□□□□ 0.53
USP42-207ENST00000521713 PRR36Q9H6K5 1346 aa18.34■□□□□ 0.53
USP42-207ENST00000521713 CCDC172P0C7W6 258 aa18.33■□□□□ 0.53
USP42-207ENST00000521713 CKAP4Q07065 602 aaKnown RBP18.33■□□□□ 0.53
USP42-207ENST00000521713 DLGAP5Q15398 846 aa18.33■□□□□ 0.53
USP42-207ENST00000521713 ALS2CR12Q96Q35 445 aa18.33■□□□□ 0.53
USP42-207ENST00000521713 DNAJC5Q9H3Z4 198 aa18.33■□□□□ 0.53
USP42-207ENST00000521713 IBTKQ9P2D0 1353 aaPredicted RBP18.33■□□□□ 0.52
USP42-207ENST00000521713 ERCC6L2Q5T890 1561 aa18.33■□□□□ 0.52
USP42-207ENST00000521713 PSMA7O14818 248 aa18.33■□□□□ 0.52
USP42-207ENST00000521713 ATP5JP18859 108 aa18.33■□□□□ 0.52
USP42-207ENST00000521713 PPP2R5BQ15173 497 aa18.33■□□□□ 0.52
USP42-207ENST00000521713 IPO4Q8TEX9 1081 aaKnown RBP18.33■□□□□ 0.52
USP42-207ENST00000521713 THRAP3Q9Y2W1 955 aaKnown RBP18.33■□□□□ 0.52
USP42-207ENST00000521713 VTI1AQ96AJ9 217 aa18.33■□□□□ 0.52
USP42-207ENST00000521713 B4E1Z4 1266 aa18.32■□□□□ 0.52
USP42-207ENST00000521713 RRAGBQ5VZM2 374 aa18.32■□□□□ 0.52
USP42-207ENST00000521713 C8orf34Q49A92 452 aa18.32■□□□□ 0.52
USP42-207ENST00000521713 USP44Q9H0E7 712 aa18.32■□□□□ 0.52
USP42-207ENST00000521713 AATFQ9NY61 560 aaKnown RBP eCLIP18.32■□□□□ 0.52
USP42-207ENST00000521713 ASIC1P78348 528 aa18.32■□□□□ 0.52
USP42-207ENST00000521713 ATL3Q6DD88 541 aa18.32■□□□□ 0.52
USP42-207ENST00000521713 ANGEL1Q9UNK9 670 aaKnown RBP18.32■□□□□ 0.52
USP42-207ENST00000521713 H7C1D1 291 aa18.32■□□□□ 0.52
USP42-207ENST00000521713 KRT13P13646 458 aa18.32■□□□□ 0.52
USP42-207ENST00000521713 AFMP43652 599 aa18.32■□□□□ 0.52
USP42-207ENST00000521713 UNC5CLQ8IV45 518 aa18.32■□□□□ 0.52
USP42-207ENST00000521713 SHROOM2Q13796 1616 aa18.32■□□□□ 0.52
USP42-207ENST00000521713 N4BP3O15049 544 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 CRKLP46109 303 aaKnown RBP18.31■□□□□ 0.52
USP42-207ENST00000521713 GNG11P61952 73 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 NCBP1Q09161 790 aaKnown RBP18.31■□□□□ 0.52
USP42-207ENST00000521713 KRT27Q7Z3Y8 459 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 SSH3Q8TE77 659 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 ABCC4O15439 1325 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 CLASP1Q7Z460 1538 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 CPLX3Q8WVH0 158 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 SGSM2O43147 1006 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 RPS6KB1P23443 525 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 ZAP70P43403 619 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 DTHD1Q6ZMT9 781 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 BRINP3Q76B58 766 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 SKILP12757 684 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 MARCKSP29966 332 aaPredicted RBP18.31■□□□□ 0.52
USP42-207ENST00000521713 TNFAIP1Q13829 316 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 ZKSCAN3Q9BRR0 538 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 ASAP1Q9ULH1 1129 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 KDM6BO15054 1643 aa18.31■□□□□ 0.52
USP42-207ENST00000521713 HSPA4P34932 840 aa18.3■□□□□ 0.52
USP42-207ENST00000521713 TICAM2Q86XR7 235 aa18.3■□□□□ 0.52
USP42-207ENST00000521713 C2CD5Q86YS7 1000 aa18.3■□□□□ 0.52
USP42-207ENST00000521713 FERMT2Q96AC1 680 aa18.3■□□□□ 0.52
USP42-207ENST00000521713 CTAGE1Q96RT6 745 aa18.3■□□□□ 0.52
USP42-207ENST00000521713 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.3■□□□□ 0.52
USP42-207ENST00000521713 DEXIO95424 95 aa18.3■□□□□ 0.52
USP42-207ENST00000521713 USPL1Q5W0Q7 1092 aa18.3■□□□□ 0.52
USP42-207ENST00000521713 BEND3Q5T5X7 828 aa18.3■□□□□ 0.52
USP42-207ENST00000521713 SLC27A2O14975 620 aa18.3■□□□□ 0.52
USP42-207ENST00000521713 GABPB1Q06547 395 aaPredicted RBP18.3■□□□□ 0.52
USP42-207ENST00000521713 CCDC129Q6ZRS4 1044 aa18.3■□□□□ 0.52
USP42-207ENST00000521713 TEKT1Q969V4 418 aa18.3■□□□□ 0.52
USP42-207ENST00000521713 CEP112Q8N8E3 955 aa18.29■□□□□ 0.52
USP42-207ENST00000521713 MAP3K4Q9Y6R4 1608 aa18.29■□□□□ 0.52
USP42-207ENST00000521713 ZNF532Q9HCE3 1301 aa18.29■□□□□ 0.52
USP42-207ENST00000521713 OTUD7AQ8TE49 926 aaPredicted RBP18.29■□□□□ 0.52
USP42-207ENST00000521713 CNPY2Q9Y2B0 182 aa18.29■□□□□ 0.52
USP42-207ENST00000521713 SPATA31A3Q5VYP0 1347 aa18.29■□□□□ 0.52
USP42-207ENST00000521713 MFSD14BQ5SR56 506 aa18.29■□□□□ 0.52
USP42-207ENST00000521713 DRC1Q96MC2 740 aa18.29■□□□□ 0.52
USP42-207ENST00000521713 TAOK3Q9H2K8 898 aa18.29■□□□□ 0.52
USP42-207ENST00000521713 BCS1LQ9Y276 419 aa18.29■□□□□ 0.52
USP42-207ENST00000521713 TCHPQ9BT92 498 aa18.29■□□□□ 0.52
USP42-207ENST00000521713 KIF1BO60333 1816 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 GTF2IP78347 998 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 TTC31Q49AM3 519 aaPredicted RBP18.28■□□□□ 0.52
USP42-207ENST00000521713 TMC4Q7Z404 712 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 LLPHQ9BRT6 129 aaKnown RBP18.28■□□□□ 0.52
USP42-207ENST00000521713 RASSF4Q9H2L5 321 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 GPCPD1Q9NPB8 672 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 MSL1Q68DK7 614 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 CCDC186Q7Z3E2 898 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 LZTS2Q9BRK4 669 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 HSF2BPO75031 334 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 DNM1Q05193 864 aaKnown RBP18.28■□□□□ 0.52
USP42-207ENST00000521713 RILPL1Q5EBL4 403 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 ISM2Q6H9L7 571 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 HS2ST1Q7LGA3 356 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 PLEKHF1Q96S99 279 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 TET3O43151 1660 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 OPA1O60313 960 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 RXRAP19793 462 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 SPAG5Q96R06 1193 aa18.28■□□□□ 0.52
USP42-207ENST00000521713 CTAGE15A4D2H0 777 aa18.27■□□□□ 0.52
USP42-207ENST00000521713 CTAGE8P0CG41 777 aa18.27■□□□□ 0.52
USP42-207ENST00000521713 CTAGE6Q86UF2 777 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms