RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 SPAG5Q96R06 1193 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 TSC22D3Q99576 134 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 ALG2Q9H553 416 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 ST7Q9NRC1 585 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 KLC4Q9NSK0 619 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 HOOK1Q9UJC3 728 aaKnown RBP5.87□□□□□ -1.47
NPM1-207ENST00000521260 USTQ9Y2C2 406 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 RPGRIP1LQ68CZ1 1315 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 USP47Q96K76 1375 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 PLB1Q6P1J6 1458 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 WIZO95785 1651 aa5.87□□□□□ -1.47
NPM1-207ENST00000521260 KDM5CP41229 1560 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 KDM5DQ9BY66 1539 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 CCDC141Q6ZP82 1450 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 PRXQ9BXM0 1461 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 ZNF521Q96K83 1311 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 MAP2K7O14733 419 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 TPPPO94811 219 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 ECEL1O95672 775 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 MYL1P05976 194 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 CCDC159P0C7I6 412 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 TROVE2P10155 538 aaKnown RBP eCLIP5.86□□□□□ -1.47
NPM1-207ENST00000521260 HCLS1P14317 486 aaPredicted RBP5.86□□□□□ -1.47
NPM1-207ENST00000521260 CNGA1P29973 690 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 CCT6AP40227 531 aaKnown RBP5.86□□□□□ -1.47
NPM1-207ENST00000521260 LIG3P49916 1009 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 WHAMMP3Q1A5X7 153 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 LHX8Q68G74 356 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 SARM1Q6SZW1 724 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 CRELD2Q6UXH1 353 aaPredicted RBP5.86□□□□□ -1.47
NPM1-207ENST00000521260 DNAJC14Q6Y2X3 702 aaPredicted RBP5.86□□□□□ -1.47
NPM1-207ENST00000521260 SYNE3Q6ZMZ3 975 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 APBB1IPQ7Z5R6 666 aaPredicted RBP5.86□□□□□ -1.47
NPM1-207ENST00000521260 LCA5Q86VQ0 697 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 SESTD1Q86VW0 696 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 DZIP1Q86YF9 867 aaKnown RBP5.86□□□□□ -1.47
NPM1-207ENST00000521260 LRRC49Q8IUZ0 686 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 CCAR2Q8N163 923 aaKnown RBP5.86□□□□□ -1.47
NPM1-207ENST00000521260 C17orf53Q8N3J3 647 aaPredicted RBP5.86□□□□□ -1.47
NPM1-207ENST00000521260 ATP11CQ8NB49 1132 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 RDH13Q8NBN7 331 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 ARHGAP45Q92619 1136 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 SMARCC1Q92922 1105 aaPredicted RBP5.86□□□□□ -1.47
NPM1-207ENST00000521260 PPP2R3CQ969Q6 453 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 L3MBTL2Q969R5 705 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 RBM17Q96I25 401 aaKnown RBP5.86□□□□□ -1.47
NPM1-207ENST00000521260 RBM41Q96IZ5 413 aaKnown RBP5.86□□□□□ -1.47
NPM1-207ENST00000521260 ZMAT2Q96NC0 199 aaKnown RBP5.86□□□□□ -1.47
NPM1-207ENST00000521260 ZBED2Q9BTP6 218 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 TSGA10Q9BZW7 698 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 PAPOLBQ9NRJ5 636 aaKnown RBP5.86□□□□□ -1.47
NPM1-207ENST00000521260 ZNF148Q9UQR1 794 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 CHMP3Q9Y3E7 222 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 CAPN7Q9Y6W3 813 aa5.86□□□□□ -1.47
NPM1-207ENST00000521260 MROH2BQ7Z745 1585 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 EFCAB5A4FU69 1503 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 ABCC2Q92887 1545 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 EVC2Q86UK5 1308 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 TARSL2A2RTX5 802 aaKnown RBP5.85□□□□□ -1.47
NPM1-207ENST00000521260 SRRM3A6NNA2 597 aaPredicted RBP5.85□□□□□ -1.47
NPM1-207ENST00000521260 GOLGA8AA7E2F4 631 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 PRC1O43663 620 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 KDM1AO60341 852 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 DNAJC8O75937 253 aaPredicted RBP5.85□□□□□ -1.47
NPM1-207ENST00000521260 BRD1O95696 1058 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 PENKP01210 267 aaPredicted RBP5.85□□□□□ -1.47
NPM1-207ENST00000521260 FAM163BP0C2L3 166 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 ZNF24P17028 368 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 STIP1P31948 543 aaKnown RBP5.85□□□□□ -1.47
NPM1-207ENST00000521260 KIF5BP33176 963 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 TXLNAP40222 546 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 USP5P45974 858 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 ZNF75DP51815 510 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 NUCB1Q02818 461 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 CCDC15Q0P6D6 951 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 PABPC4Q13310 644 aaKnown RBP eCLIP5.85□□□□□ -1.47
NPM1-207ENST00000521260 INF2Q27J81 1249 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 USH1GQ495M9 461 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 CCDC40Q4G0X9 1142 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 INTS3Q68E01 1043 aaKnown RBP5.85□□□□□ -1.47
NPM1-207ENST00000521260 ARMC9Q7Z3E5 817 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 PLA2G4DQ86XP0 818 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 HOMER1Q86YM7 354 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 SMYD1Q8NB12 490 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 CNNM3Q8NE01 707 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 USP33Q8TEY7 942 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 WHAMMQ8TF30 809 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 LEO1Q8WVC0 666 aaPredicted RBP5.85□□□□□ -1.47
NPM1-207ENST00000521260 LMBR1Q8WVP7 490 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 CUL5Q93034 780 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 HLA-CQ95604 372 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 GCC1Q96CN9 775 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 ZBTB10Q96DT7 871 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 CDK5RAP3Q96JB5 506 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 AGBL1Q96MI9 1066 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 JAKMIP1Q96N16 626 aaKnown RBP5.85□□□□□ -1.47
NPM1-207ENST00000521260 SLX1AQ9BQ83 275 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 GORASP1Q9BQQ3 440 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 PAGR1Q9BTK6 254 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 SLC4A5Q9BY07 1137 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms