RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 NT5C2P49902 561 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 KCNQ4P56696 695 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 SLFNL1Q499Z3 407 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 ERFEQ4G0M1 354 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 TTLL5Q6EMB2 1281 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 PI16Q6UXB8 463 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 CDC37L1Q7L3B6 337 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 HELBQ8NG08 1087 aaPredicted RBP11.67□□□□□ -0.54
SPARC-202ENST00000520687 PANK2Q9BZ23 570 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 KRT23Q9C075 422 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 RBM27Q9P2N5 1060 aaKnown RBP11.67□□□□□ -0.54
SPARC-202ENST00000520687 BCS1LQ9Y276 419 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 C4AP0C0L4 1744 aa11.66□□□□□ -0.54
SPARC-202ENST00000520687 C4BP0C0L5 1744 aa11.66□□□□□ -0.54
SPARC-202ENST00000520687 SALL1Q9NSC2 1324 aa11.66□□□□□ -0.54
SPARC-202ENST00000520687 PTPDC1A2A3K4 754 aa11.66□□□□□ -0.54
SPARC-202ENST00000520687 FAM177BA6PVY3 158 aa11.66□□□□□ -0.54
SPARC-202ENST00000520687 APPP05067 770 aa11.66□□□□□ -0.54
SPARC-202ENST00000520687 PCP11498 1178 aaKnown RBP11.66□□□□□ -0.54
SPARC-202ENST00000520687 LBX1P52954 281 aa11.66□□□□□ -0.54
SPARC-202ENST00000520687 RCAN1P53805 252 aa11.66□□□□□ -0.54
SPARC-202ENST00000520687 RESTQ13127 1097 aa11.66□□□□□ -0.54
SPARC-202ENST00000520687 TMTC2Q8N394 836 aa11.66□□□□□ -0.54
SPARC-202ENST00000520687 RNF41Q9H4P4 317 aaPredicted RBP11.66□□□□□ -0.54
SPARC-202ENST00000520687 CREBZFQ9NS37 354 aa11.66□□□□□ -0.54
SPARC-202ENST00000520687 DDX19AQ9NUU7 478 aaKnown RBP11.66□□□□□ -0.54
SPARC-202ENST00000520687 ANGEL1Q9UNK9 670 aaKnown RBP11.66□□□□□ -0.54
SPARC-202ENST00000520687 NSFL1CQ9UNZ2 370 aaKnown RBP11.66□□□□□ -0.54
SPARC-202ENST00000520687 JAK2O60674 1132 aa11.65□□□□□ -0.54
SPARC-202ENST00000520687 PRKCSHP14314 528 aaPredicted RBP11.65□□□□□ -0.54
SPARC-202ENST00000520687 CLCN1P35523 988 aa11.65□□□□□ -0.54
SPARC-202ENST00000520687 LIFRP42702 1097 aa11.65□□□□□ -0.54
SPARC-202ENST00000520687 RPS8P62241 208 aaKnown RBP11.65□□□□□ -0.54
SPARC-202ENST00000520687 COL9A3Q14050 684 aaPredicted RBP11.65□□□□□ -0.54
SPARC-202ENST00000520687 GIMAP6Q6P9H5 292 aa11.65□□□□□ -0.54
SPARC-202ENST00000520687 NBPF5PQ86XG9 351 aaPredicted RBP11.65□□□□□ -0.54
SPARC-202ENST00000520687 MAGEB6Q8N7X4 407 aa11.65□□□□□ -0.54
SPARC-202ENST00000520687 SPATA32Q96LK8 384 aa11.65□□□□□ -0.54
SPARC-202ENST00000520687 NAPBQ9H115 298 aa11.65□□□□□ -0.54
SPARC-202ENST00000520687 RBSNQ9H1K0 784 aa11.65□□□□□ -0.54
SPARC-202ENST00000520687 GDPD2Q9HCC8 539 aa11.65□□□□□ -0.54
SPARC-202ENST00000520687 LRP2BPQ9P2M1 347 aa11.65□□□□□ -0.54
SPARC-202ENST00000520687 MKRN1Q9UHC7 482 aaKnown RBP11.65□□□□□ -0.54
SPARC-202ENST00000520687 AKAP11Q9UKA4 1901 aa11.65□□□□□ -0.55
SPARC-202ENST00000520687 CPLX1O14810 134 aa11.64□□□□□ -0.55
SPARC-202ENST00000520687 CTDNEP1O95476 244 aa11.64□□□□□ -0.55
SPARC-202ENST00000520687 SART3Q15020 963 aaKnown RBP11.64□□□□□ -0.55
SPARC-202ENST00000520687 FOXD4L6Q3SYB3 417 aaPredicted RBP11.64□□□□□ -0.55
SPARC-202ENST00000520687 FOXD4L3Q6VB84 417 aaPredicted RBP11.64□□□□□ -0.55
SPARC-202ENST00000520687 SGMS1Q86VZ5 419 aa11.64□□□□□ -0.55
SPARC-202ENST00000520687 IFNL3Q8IZI9 196 aa11.64□□□□□ -0.55
SPARC-202ENST00000520687 LEO1Q8WVC0 666 aaPredicted RBP11.64□□□□□ -0.55
SPARC-202ENST00000520687 CHAMP1Q96JM3 812 aa11.64□□□□□ -0.55
SPARC-202ENST00000520687 LRRC2Q9BYS8 371 aa11.64□□□□□ -0.55
SPARC-202ENST00000520687 BCL2L12Q9HB09 334 aa11.64□□□□□ -0.55
SPARC-202ENST00000520687 MINPP1Q9UNW1 487 aa11.64□□□□□ -0.55
SPARC-202ENST00000520687 KLF18A0A0U1RQI7 1052 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 GNPATO15228 680 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 MBD4O95243 580 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 CAVIN2O95810 425 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 BCAMP50895 628 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 HAND2P61296 217 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 PPP2R5BQ15173 497 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 TRAPPC3LQ5T215 181 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 TBC1D9BQ66K14 1250 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 BRAPQ7Z569 592 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 FBXO33Q7Z6M2 555 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 TTC6Q86TZ1 520 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 VPS37DQ86XT2 251 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 PDLIM2Q96JY6 352 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 RCOR1Q9UKL0 485 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 UBR3Q6ZT12 1888 aa11.63□□□□□ -0.55
SPARC-202ENST00000520687 GOLGA8BA8MQT2 603 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 SH2B2O14492 632 aaPredicted RBP11.62□□□□□ -0.55
SPARC-202ENST00000520687 VEGFAP15692 232 aaPredicted RBP11.62□□□□□ -0.55
SPARC-202ENST00000520687 ANTXR2P58335 489 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 TGFB2P61812 414 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 AKNAD1Q5T1N1 836 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 SYNE3Q6ZMZ3 975 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 STAG1Q8WVM7 1258 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 DDX11Q96FC9 970 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 ANAPC4Q9UJX5 808 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 MYH7P12883 1935 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 GSG1L2A8MUP6 293 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 CTAGE5O15320 804 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 CCDC192P0DO97 292 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 RFC4P35249 363 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 CCT2P78371 535 aaKnown RBP11.62□□□□□ -0.55
SPARC-202ENST00000520687 SPTY2D1Q68D10 685 aaPredicted RBP11.62□□□□□ -0.55
SPARC-202ENST00000520687 MFSD6Q6ZSS7 791 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 FERMT3Q86UX7 667 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 WASF1Q92558 559 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 NAP1L2Q9ULW6 460 aaPredicted RBP11.62□□□□□ -0.55
SPARC-202ENST00000520687 SLC4A4Q9Y6R1 1079 aa11.62□□□□□ -0.55
SPARC-202ENST00000520687 ZC3H4Q9UPT8 1303 aaKnown RBP11.61□□□□□ -0.55
SPARC-202ENST00000520687 CNTNAP1P78357 1384 aa11.61□□□□□ -0.55
SPARC-202ENST00000520687 NID2Q14112 1375 aa11.61□□□□□ -0.55
SPARC-202ENST00000520687 MAGEB6P1A0A0J9YX57 407 aa11.61□□□□□ -0.55
SPARC-202ENST00000520687 CCDC196A0A1B0GTZ2 297 aa11.61□□□□□ -0.55
SPARC-202ENST00000520687 CYP7A1P22680 504 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms