RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 DAGLAQ9Y4D2 1042 aa19.96■□□□□ 0.79
IGHV3-42-201ENST00000520410 IGF2BP3O00425 579 aaKnown RBP eCLIP19.95■□□□□ 0.78
IGHV3-42-201ENST00000520410 MIGA2Q7L4E1 593 aa19.95■□□□□ 0.78
IGHV3-42-201ENST00000520410 FAM83AQ86UY5 434 aa19.95■□□□□ 0.78
IGHV3-42-201ENST00000520410 CNKSR2Q8WXI2 1034 aa19.95■□□□□ 0.78
IGHV3-42-201ENST00000520410 XAGE2Q96GT9 111 aa19.95■□□□□ 0.78
IGHV3-42-201ENST00000520410 R3HDMLQ9H3Y0 253 aa19.95■□□□□ 0.78
IGHV3-42-201ENST00000520410 USP40Q9NVE5 1235 aa19.95■□□□□ 0.78
IGHV3-42-201ENST00000520410 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.94■□□□□ 0.78
IGHV3-42-201ENST00000520410 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.94■□□□□ 0.78
IGHV3-42-201ENST00000520410 MRIQ9BWK5 157 aa19.94■□□□□ 0.78
IGHV3-42-201ENST00000520410 C1orf115Q9H7X2 142 aa19.94■□□□□ 0.78
IGHV3-42-201ENST00000520410 CCL15-CCL14A0A0B4J2E2 113 aa19.93■□□□□ 0.78
IGHV3-42-201ENST00000520410 RASGRF1Q13972 1273 aa19.93■□□□□ 0.78
IGHV3-42-201ENST00000520410 CCL15Q16663 113 aa19.93■□□□□ 0.78
IGHV3-42-201ENST00000520410 CDC42EP5Q6NZY7 148 aa19.93■□□□□ 0.78
IGHV3-42-201ENST00000520410 ZSCAN29Q8IWY8 852 aaPredicted RBP19.93■□□□□ 0.78
IGHV3-42-201ENST00000520410 ZKSCAN4Q969J2 545 aaPredicted RBP19.93■□□□□ 0.78
IGHV3-42-201ENST00000520410 ZNF341Q9BYN7 854 aa19.93■□□□□ 0.78
IGHV3-42-201ENST00000520410 PNMA6EA0A0J9YXQ4 647 aa19.92■□□□□ 0.78
IGHV3-42-201ENST00000520410 GTF2A2P52657 109 aa19.92■□□□□ 0.78
IGHV3-42-201ENST00000520410 MTX1Q13505 466 aa19.92■□□□□ 0.78
IGHV3-42-201ENST00000520410 PKN2Q16513 984 aaKnown RBP19.92■□□□□ 0.78
IGHV3-42-201ENST00000520410 SPTY2D1Q68D10 685 aaPredicted RBP19.92■□□□□ 0.78
IGHV3-42-201ENST00000520410 SLF2Q8IX21 1173 aa19.92■□□□□ 0.78
IGHV3-42-201ENST00000520410 HPS5Q9UPZ3 1129 aa19.92■□□□□ 0.78
IGHV3-42-201ENST00000520410 SALL1Q9NSC2 1324 aa19.92■□□□□ 0.78
IGHV3-42-201ENST00000520410 WDHD1O75717 1129 aaPredicted RBP19.91■□□□□ 0.78
IGHV3-42-201ENST00000520410 CRHR2Q13324 411 aa19.91■□□□□ 0.78
IGHV3-42-201ENST00000520410 PICALMQ13492 652 aa19.91■□□□□ 0.78
IGHV3-42-201ENST00000520410 FKBP1CQ5VVH2 108 aa19.91■□□□□ 0.78
IGHV3-42-201ENST00000520410 ERICH6Q7L0X2 663 aa19.91■□□□□ 0.78
IGHV3-42-201ENST00000520410 FAM151AQ8WW52 585 aa19.91■□□□□ 0.78
IGHV3-42-201ENST00000520410 TRIM17Q9Y577 477 aa19.91■□□□□ 0.78
IGHV3-42-201ENST00000520410 NFIAQ12857 509 aa19.9■□□□□ 0.78
IGHV3-42-201ENST00000520410 TAF1CQ15572 869 aaPredicted RBP19.9■□□□□ 0.78
IGHV3-42-201ENST00000520410 RPAP1Q9BWH6 1393 aaPredicted RBP19.9■□□□□ 0.78
IGHV3-42-201ENST00000520410 BTDP43251 543 aa19.89■□□□□ 0.77
IGHV3-42-201ENST00000520410 NOM1Q5C9Z4 860 aaKnown RBP19.89■□□□□ 0.77
IGHV3-42-201ENST00000520410 CD99L2Q8TCZ2 262 aa19.89■□□□□ 0.77
IGHV3-42-201ENST00000520410 ERO1AQ96HE7 468 aa19.89■□□□□ 0.77
IGHV3-42-201ENST00000520410 CFHR5Q9BXR6 569 aa19.89■□□□□ 0.77
IGHV3-42-201ENST00000520410 RAI14Q9P0K7 980 aa19.89■□□□□ 0.77
IGHV3-42-201ENST00000520410 SNCAIPQ9Y6H5 919 aa19.89■□□□□ 0.77
IGHV3-42-201ENST00000520410 SPDYE5A6NIY4 337 aa19.88■□□□□ 0.77
IGHV3-42-201ENST00000520410 TTC39AQ5SRH9 613 aa19.88■□□□□ 0.77
IGHV3-42-201ENST00000520410 FBXO46Q6PJ61 603 aaPredicted RBP19.88■□□□□ 0.77
IGHV3-42-201ENST00000520410 ERO1BQ86YB8 467 aa19.88■□□□□ 0.77
IGHV3-42-201ENST00000520410 BRI3BPQ8WY22 251 aa19.88■□□□□ 0.77
IGHV3-42-201ENST00000520410 PTPN18Q99952 460 aa19.88■□□□□ 0.77
IGHV3-42-201ENST00000520410 ZFYVE28Q9HCC9 887 aa19.88■□□□□ 0.77
IGHV3-42-201ENST00000520410 AK9Q5TCS8 1911 aa19.88■□□□□ 0.77
IGHV3-42-201ENST00000520410 ZBED9Q6R2W3 1325 aa19.87■□□□□ 0.77
IGHV3-42-201ENST00000520410 SURF6O75683 361 aaKnown RBP19.87■□□□□ 0.77
IGHV3-42-201ENST00000520410 CETPP11597 493 aa19.87■□□□□ 0.77
IGHV3-42-201ENST00000520410 INPP5BP32019 993 aa19.87■□□□□ 0.77
IGHV3-42-201ENST00000520410 RGS3P49796 1198 aa19.87■□□□□ 0.77
IGHV3-42-201ENST00000520410 PI16Q6UXB8 463 aa19.87■□□□□ 0.77
IGHV3-42-201ENST00000520410 SPATA5Q8NB90 893 aa19.87■□□□□ 0.77
IGHV3-42-201ENST00000520410 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.87■□□□□ 0.77
IGHV3-42-201ENST00000520410 MROH7-TTC4A0A0A0MT08 1334 aa19.86■□□□□ 0.77
IGHV3-42-201ENST00000520410 ECM2O94769 699 aaPredicted RBP19.86■□□□□ 0.77
IGHV3-42-201ENST00000520410 SP3Q02447 781 aa19.86■□□□□ 0.77
IGHV3-42-201ENST00000520410 SNAPC2Q13487 334 aa19.86■□□□□ 0.77
IGHV3-42-201ENST00000520410 MS4A4AQ96JQ5 239 aa19.86■□□□□ 0.77
IGHV3-42-201ENST00000520410 NOL10Q9BSC4 688 aaKnown RBP19.86■□□□□ 0.77
IGHV3-42-201ENST00000520410 HMG20BQ9P0W2 317 aa19.86■□□□□ 0.77
IGHV3-42-201ENST00000520410 LRP2BPQ9P2M1 347 aa19.86■□□□□ 0.77
IGHV3-42-201ENST00000520410 FAM198AQ9UFP1 575 aa19.86■□□□□ 0.77
IGHV3-42-201ENST00000520410 PDS5AQ29RF7 1337 aaKnown RBP19.85■□□□□ 0.77
IGHV3-42-201ENST00000520410 TESPA1A2RU30 521 aaPredicted RBP19.85■□□□□ 0.77
IGHV3-42-201ENST00000520410 IRF6O14896 467 aa19.85■□□□□ 0.77
IGHV3-42-201ENST00000520410 UQCRFS1P1P0C7P4 283 aa19.85■□□□□ 0.77
IGHV3-42-201ENST00000520410 GSTO1P78417 241 aa19.85■□□□□ 0.77
IGHV3-42-201ENST00000520410 MECOMQ03112 1051 aa19.85■□□□□ 0.77
IGHV3-42-201ENST00000520410 CCDC158Q5M9N0 1113 aa19.85■□□□□ 0.77
IGHV3-42-201ENST00000520410 TBC1D9Q6ZT07 1266 aa19.85■□□□□ 0.77
IGHV3-42-201ENST00000520410 FAM43AQ8N2R8 423 aa19.85■□□□□ 0.77
IGHV3-42-201ENST00000520410 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.85■□□□□ 0.77
IGHV3-42-201ENST00000520410 BCL11AQ9H165 835 aa19.85■□□□□ 0.77
IGHV3-42-201ENST00000520410 PPIL2Q13356 520 aa19.84■□□□□ 0.77
IGHV3-42-201ENST00000520410 OTOP1Q7RTM1 612 aa19.84■□□□□ 0.77
IGHV3-42-201ENST00000520410 ZFPM1Q8IX07 1006 aa19.84■□□□□ 0.77
IGHV3-42-201ENST00000520410 EFCC1Q9HA90 598 aa19.84■□□□□ 0.77
IGHV3-42-201ENST00000520410 SNRKQ9NRH2 765 aa19.84■□□□□ 0.77
IGHV3-42-201ENST00000520410 MYH2Q9UKX2 1941 aa19.84■□□□□ 0.77
IGHV3-42-201ENST00000520410 GAKO14976 1311 aa19.83■□□□□ 0.77
IGHV3-42-201ENST00000520410 LDHCP07864 332 aa19.83■□□□□ 0.77
IGHV3-42-201ENST00000520410 RLBP1P12271 317 aa19.83■□□□□ 0.77
IGHV3-42-201ENST00000520410 ATP8B2P98198 1209 aa19.83■□□□□ 0.77
IGHV3-42-201ENST00000520410 TNNI3KQ59H18 835 aa19.83■□□□□ 0.77
IGHV3-42-201ENST00000520410 FPGT-TNNI3KV9GXZ4 949 aa19.83■□□□□ 0.77
IGHV3-42-201ENST00000520410 LAMB1P07942 1786 aa19.83■□□□□ 0.76
IGHV3-42-201ENST00000520410 ENTPD3O75355 529 aa19.82■□□□□ 0.76
IGHV3-42-201ENST00000520410 ARID4AP29374 1257 aaPredicted RBP19.82■□□□□ 0.76
IGHV3-42-201ENST00000520410 RGS19P49795 217 aa19.82■□□□□ 0.76
IGHV3-42-201ENST00000520410 PPATQ06203 517 aa19.82■□□□□ 0.76
IGHV3-42-201ENST00000520410 PANK1Q8TE04 598 aa19.82■□□□□ 0.76
IGHV3-42-201ENST00000520410 DBNDD2Q9BQY9 259 aa19.82■□□□□ 0.76
IGHV3-42-201ENST00000520410 PICK1Q9NRD5 415 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms