RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 WDR90Q96KV7 1748 aa21.41■■□□□ 1.02
SDC2-205ENST00000520233 SPDYE2BA6NHP3 402 aa21.4■■□□□ 1.02
SDC2-205ENST00000520233 SPDYE6P0CI01 402 aa21.4■■□□□ 1.02
SDC2-205ENST00000520233 PLCG2P16885 1265 aa21.4■■□□□ 1.02
SDC2-205ENST00000520233 DYNLL1P63167 89 aaKnown RBP21.4■■□□□ 1.02
SDC2-205ENST00000520233 KIF4BQ2VIQ3 1234 aa21.4■■□□□ 1.02
SDC2-205ENST00000520233 SAMD7Q7Z3H4 446 aa21.4■■□□□ 1.02
SDC2-205ENST00000520233 PRMT6Q96LA8 375 aaPredicted RBP21.4■■□□□ 1.02
SDC2-205ENST00000520233 POTECB2RU33 542 aa21.39■■□□□ 1.01
SDC2-205ENST00000520233 SGSM2O43147 1006 aa21.39■■□□□ 1.01
SDC2-205ENST00000520233 MBD4O95243 580 aa21.39■■□□□ 1.01
SDC2-205ENST00000520233 TBC1D10BQ4KMP7 808 aaPredicted RBP21.39■■□□□ 1.01
SDC2-205ENST00000520233 RBM26Q5T8P6 1007 aaKnown RBP21.39■■□□□ 1.01
SDC2-205ENST00000520233 LCORLQ8N3X6 602 aa21.39■■□□□ 1.01
SDC2-205ENST00000520233 ESYT1Q9BSJ8 1104 aa21.39■■□□□ 1.01
SDC2-205ENST00000520233 ARMT1Q9H993 441 aa21.39■■□□□ 1.01
SDC2-205ENST00000520233 ADAMTSL1Q8N6G6 1762 aa21.38■■□□□ 1.01
SDC2-205ENST00000520233 WNT10BO00744 389 aa21.38■■□□□ 1.01
SDC2-205ENST00000520233 GPAA1O43292 621 aa21.38■■□□□ 1.01
SDC2-205ENST00000520233 EGFRP00533 1210 aa21.38■■□□□ 1.01
SDC2-205ENST00000520233 MFAP1P55081 439 aaKnown RBP21.38■■□□□ 1.01
SDC2-205ENST00000520233 RHBDL3P58872 404 aa21.38■■□□□ 1.01
SDC2-205ENST00000520233 STRBPQ96SI9 672 aaKnown RBP21.38■■□□□ 1.01
SDC2-205ENST00000520233 USP40Q9NVE5 1235 aa21.38■■□□□ 1.01
SDC2-205ENST00000520233 CCDC171Q6TFL3 1326 aa21.37■■□□□ 1.01
SDC2-205ENST00000520233 SCN4AP35499 1836 aa21.37■■□□□ 1.01
SDC2-205ENST00000520233 EPHX2P34913 555 aa21.37■■□□□ 1.01
SDC2-205ENST00000520233 CDC42EP5Q6NZY7 148 aa21.37■■□□□ 1.01
SDC2-205ENST00000520233 CCDC129Q6ZRS4 1044 aa21.37■■□□□ 1.01
SDC2-205ENST00000520233 USP50Q70EL3 339 aaPredicted RBP21.37■■□□□ 1.01
SDC2-205ENST00000520233 ZNF589Q86UQ0 364 aaPredicted RBP21.37■■□□□ 1.01
SDC2-205ENST00000520233 TRPM4Q8TD43 1214 aa21.37■■□□□ 1.01
SDC2-205ENST00000520233 SH3RF3Q8TEJ3 882 aaPredicted RBP21.37■■□□□ 1.01
SDC2-205ENST00000520233 IL25Q9H293 177 aa21.37■■□□□ 1.01
SDC2-205ENST00000520233 TDRD3Q9H7E2 651 aaKnown RBP21.37■■□□□ 1.01
SDC2-205ENST00000520233 MYO1BO43795 1136 aa21.36■■□□□ 1.01
SDC2-205ENST00000520233 GNAT2P19087 354 aa21.36■■□□□ 1.01
SDC2-205ENST00000520233 YY1P25490 414 aa21.36■■□□□ 1.01
SDC2-205ENST00000520233 NBPF9Q3BBW0 867 aa21.36■■□□□ 1.01
SDC2-205ENST00000520233 CRNKL1Q9BZJ0 848 aaKnown RBP21.36■■□□□ 1.01
SDC2-205ENST00000520233 TAF1DQ9H5J8 278 aaPredicted RBP21.36■■□□□ 1.01
SDC2-205ENST00000520233 VEGFAP15692 232 aaPredicted RBP21.35■■□□□ 1.01
SDC2-205ENST00000520233 HIRAP54198 1017 aaPredicted RBP21.35■■□□□ 1.01
SDC2-205ENST00000520233 SPDYE2Q495Y8 402 aa21.35■■□□□ 1.01
SDC2-205ENST00000520233 C8orf34Q49A92 452 aa21.35■■□□□ 1.01
SDC2-205ENST00000520233 RRAGCQ9HB90 399 aa21.35■■□□□ 1.01
SDC2-205ENST00000520233 ZNF70Q9UC06 446 aaPredicted RBP21.35■■□□□ 1.01
SDC2-205ENST00000520233 PNMA8AQ86V59 439 aaPredicted RBP21.34■■□□□ 1.01
SDC2-205ENST00000520233 TEX11Q8IYF3 940 aa21.34■■□□□ 1.01
SDC2-205ENST00000520233 TMOD2Q9NZR1 351 aa21.34■■□□□ 1.01
SDC2-205ENST00000520233 SLC4A4Q9Y6R1 1079 aa21.34■■□□□ 1.01
SDC2-205ENST00000520233 RPAP1Q9BWH6 1393 aaPredicted RBP21.34■■□□□ 1.01
SDC2-205ENST00000520233 PRKAB2O43741 272 aa21.33■■□□□ 1.01
SDC2-205ENST00000520233 IDI2Q9BXS1 227 aa21.33■■□□□ 1.01
SDC2-205ENST00000520233 CLRN2A0PK11 232 aa21.32■■□□□ 1
SDC2-205ENST00000520233 PATL2C9JE40 543 aaKnown RBP21.32■■□□□ 1
SDC2-205ENST00000520233 EIF5BO60841 1220 aaKnown RBP21.32■■□□□ 1
SDC2-205ENST00000520233 WDHD1O75717 1129 aaPredicted RBP21.32■■□□□ 1
SDC2-205ENST00000520233 FKBP1CQ5VVH2 108 aa21.32■■□□□ 1
SDC2-205ENST00000520233 KIAA1211Q6ZU35 1233 aa21.32■■□□□ 1
SDC2-205ENST00000520233 GSG1L2A8MUP6 293 aa21.31■■□□□ 1
SDC2-205ENST00000520233 NPM3O75607 178 aaKnown RBP21.31■■□□□ 1
SDC2-205ENST00000520233 HSPD1P10809 573 aaKnown RBP21.31■■□□□ 1
SDC2-205ENST00000520233 USP5P45974 858 aa21.31■■□□□ 1
SDC2-205ENST00000520233 ZNF526Q8TF50 670 aaPredicted RBP21.31■■□□□ 1
SDC2-205ENST00000520233 TGFBRAP1Q8WUH2 860 aa21.31■■□□□ 1
SDC2-205ENST00000520233 DSCC1Q9BVC3 393 aa21.31■■□□□ 1
SDC2-205ENST00000520233 NMRK2Q9NPI5 230 aa21.31■■□□□ 1
SDC2-205ENST00000520233 ATP8A2Q9NTI2 1148 aa21.31■■□□□ 1
SDC2-205ENST00000520233 UTRNP46939 3433 aa21.31■■□□□ 1
SDC2-205ENST00000520233 ASTN2O75129 1339 aaPredicted RBP21.3■■□□□ 1
SDC2-205ENST00000520233 FOXP2O15409 715 aa21.3■■□□□ 1
SDC2-205ENST00000520233 CACNB3P54284 484 aa21.3■■□□□ 1
SDC2-205ENST00000520233 VPS53Q5VIR6 699 aa21.3■■□□□ 1
SDC2-205ENST00000520233 GIMAP6Q6P9H5 292 aa21.3■■□□□ 1
SDC2-205ENST00000520233 ZC3H15Q8WU90 426 aaKnown RBP21.3■■□□□ 1
SDC2-205ENST00000520233 SDR42E1Q8WUS8 393 aa21.3■■□□□ 1
SDC2-205ENST00000520233 VEZTQ9HBM0 779 aa21.3■■□□□ 1
SDC2-205ENST00000520233 MKRN1Q9UHC7 482 aaKnown RBP21.3■■□□□ 1
SDC2-205ENST00000520233 ECM29Q5VYK3 1845 aa21.29■■□□□ 1
SDC2-205ENST00000520233 ENTPD3O75355 529 aa21.29■■□□□ 1
SDC2-205ENST00000520233 REC8O95072 547 aa21.29■■□□□ 1
SDC2-205ENST00000520233 APPP05067 770 aa21.29■■□□□ 1
SDC2-205ENST00000520233 NFIAQ12857 509 aa21.29■■□□□ 1
SDC2-205ENST00000520233 ANGEL2Q5VTE6 544 aaKnown RBP21.29■■□□□ 1
SDC2-205ENST00000520233 IFNL3Q8IZI9 196 aa21.29■■□□□ 1
SDC2-205ENST00000520233 DDRGK1Q96HY6 314 aa21.29■■□□□ 1
SDC2-205ENST00000520233 NACAP1Q9BZK3 213 aa21.29■■□□□ 1
SDC2-205ENST00000520233 LSG1Q9H089 658 aaKnown RBP21.29■■□□□ 1
SDC2-205ENST00000520233 DCP1AQ9NPI6 582 aaPredicted RBP21.29■■□□□ 1
SDC2-205ENST00000520233 ANO2Q9NQ90 1003 aa21.29■■□□□ 1
SDC2-205ENST00000520233 DDX4Q9NQI0 724 aaKnown RBP21.29■■□□□ 1
SDC2-205ENST00000520233 GGA3Q9NZ52 723 aa21.29■■□□□ 1
SDC2-205ENST00000520233 FAM198AQ9UFP1 575 aa21.29■■□□□ 1
SDC2-205ENST00000520233 PGAP2Q9UHJ9 254 aa21.29■■□□□ 1
SDC2-205ENST00000520233 FLT1P17948 1338 aa21.29■■□□□ 1
SDC2-205ENST00000520233 PITPNM2Q9BZ72 1349 aa21.29■■□□□ 1
SDC2-205ENST00000520233 TCP10L2B9ZVM9 353 aa21.28■■□□□ 1
SDC2-205ENST00000520233 PTH1RQ03431 593 aa21.28■■□□□ 1
SDC2-205ENST00000520233 PICALMQ13492 652 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms