RNA–Protein interactions for RNA: ENST00000519632.5

SHPRH-207, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 5,245 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-207ENST00000519632 SMIM24O75264 130 aa13.72□□□□□ -0.21
SHPRH-207ENST00000519632 SH3BGRP55822 239 aaPredicted RBP13.72□□□□□ -0.21
SHPRH-207ENST00000519632 NAA30Q147X3 362 aaPredicted RBP13.72□□□□□ -0.21
SHPRH-207ENST00000519632 SAMD1Q6SPF0 538 aaPredicted RBP13.72□□□□□ -0.21
SHPRH-207ENST00000519632 CHST3Q7LGC8 479 aa13.72□□□□□ -0.21
SHPRH-207ENST00000519632 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.72□□□□□ -0.21
SHPRH-207ENST00000519632 CARD14Q9BXL6 1004 aa13.72□□□□□ -0.21
SHPRH-207ENST00000519632 TM6SF1Q9BZW5 370 aa13.72□□□□□ -0.21
SHPRH-207ENST00000519632 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.72□□□□□ -0.21
SHPRH-207ENST00000519632 RANBP6O60518 1105 aaKnown RBP13.72□□□□□ -0.21
SHPRH-207ENST00000519632 ME3Q16798 604 aa13.72□□□□□ -0.21
SHPRH-207ENST00000519632 GRIPAP1Q4V328 841 aa13.72□□□□□ -0.21
SHPRH-207ENST00000519632 TTC19Q6DKK2 380 aaPredicted RBP13.72□□□□□ -0.21
SHPRH-207ENST00000519632 ZNF365Q70YC5 407 aa13.72□□□□□ -0.21
SHPRH-207ENST00000519632 CCDC170Q8IYT3 715 aa13.72□□□□□ -0.21
SHPRH-207ENST00000519632 IKBKGQ9Y6K9 419 aa13.72□□□□□ -0.21
SHPRH-207ENST00000519632 IFT88Q13099 833 aa13.71□□□□□ -0.21
SHPRH-207ENST00000519632 MTMR3Q13615 1198 aa13.71□□□□□ -0.21
SHPRH-207ENST00000519632 SPATA31E1Q6ZUB1 1445 aa13.71□□□□□ -0.21
SHPRH-207ENST00000519632 STX10O60499 249 aa13.71□□□□□ -0.21
SHPRH-207ENST00000519632 MAP3K12Q12852 859 aa13.71□□□□□ -0.21
SHPRH-207ENST00000519632 SH2D4BQ5SQS7 431 aa13.71□□□□□ -0.21
SHPRH-207ENST00000519632 CCDC85AQ96PX6 553 aaPredicted RBP13.71□□□□□ -0.21
SHPRH-207ENST00000519632 LRRC27Q9C0I9 530 aa13.71□□□□□ -0.21
SHPRH-207ENST00000519632 SUDS3Q9H7L9 328 aaPredicted RBP13.71□□□□□ -0.21
SHPRH-207ENST00000519632 SEC63Q9UGP8 760 aaKnown RBP13.71□□□□□ -0.21
SHPRH-207ENST00000519632 STK38LQ9Y2H1 464 aa13.71□□□□□ -0.21
SHPRH-207ENST00000519632 GRIN2AQ12879 1464 aa13.71□□□□□ -0.21
SHPRH-207ENST00000519632 ANKRD65E5RJM6 399 aa13.71□□□□□ -0.21
SHPRH-207ENST00000519632 CLTAP09496 248 aa13.71□□□□□ -0.21
SHPRH-207ENST00000519632 ARID5AQ03989 594 aa13.71□□□□□ -0.21
SHPRH-207ENST00000519632 CUL4AQ13619 759 aa13.71□□□□□ -0.21
SHPRH-207ENST00000519632 SPTY2D1Q68D10 685 aaPredicted RBP13.71□□□□□ -0.21
SHPRH-207ENST00000519632 CROCCP2Q86T23 111 aa13.71□□□□□ -0.21
SHPRH-207ENST00000519632 ERCC3P19447 782 aa13.71□□□□□ -0.22
SHPRH-207ENST00000519632 CEP128Q6ZU80 1094 aa13.71□□□□□ -0.22
SHPRH-207ENST00000519632 STRN4Q9NRL3 753 aa13.71□□□□□ -0.22
SHPRH-207ENST00000519632 CIB2O75838 187 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 RTN1Q16799 776 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 MFSD6Q6ZSS7 791 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 PPP1R14CQ8TAE6 165 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 CLEC17AQ6ZS10 378 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 CCDC25Q86WR0 208 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 SNRKQ9NRH2 765 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 TPX2Q9ULW0 747 aaKnown RBP13.7□□□□□ -0.22
SHPRH-207ENST00000519632 EIF2AK4Q9P2K8 1649 aaKnown RBP13.7□□□□□ -0.22
SHPRH-207ENST00000519632 CUTAO60888 179 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 CFAP221Q4G0U5 840 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 ADALQ6DHV7 355 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 RPUSD2Q8IZ73 545 aaKnown RBP13.7□□□□□ -0.22
SHPRH-207ENST00000519632 IQUBQ8NA54 791 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 NOX5Q96PH1 765 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 IQCGQ9H095 443 aaKnown RBP13.7□□□□□ -0.22
SHPRH-207ENST00000519632 FAM114A2Q9NRY5 505 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 CHUKO15111 745 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 JAK2O60674 1132 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 ASIC1P78348 528 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 APBA1Q02410 837 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 MUM1Q2TAK8 710 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 SRLQ86TD4 932 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 TRIM6Q9C030 488 aaPredicted RBP13.7□□□□□ -0.22
SHPRH-207ENST00000519632 SLC24A3Q9HC58 644 aa13.7□□□□□ -0.22
SHPRH-207ENST00000519632 WWC2Q6AWC2 1192 aa13.69□□□□□ -0.22
SHPRH-207ENST00000519632 KCNH5Q8NCM2 988 aa13.69□□□□□ -0.22
SHPRH-207ENST00000519632 TBC1D8BQ0IIM8 1120 aa13.69□□□□□ -0.22
SHPRH-207ENST00000519632 WTAPQ15007 396 aa13.69□□□□□ -0.22
SHPRH-207ENST00000519632 KRT71Q3SY84 523 aa13.69□□□□□ -0.22
SHPRH-207ENST00000519632 TAOK1Q7L7X3 1001 aa13.69□□□□□ -0.22
SHPRH-207ENST00000519632 HGSO14964 777 aaPredicted RBP13.69□□□□□ -0.22
SHPRH-207ENST00000519632 CETN3O15182 167 aa13.69□□□□□ -0.22
SHPRH-207ENST00000519632 USP5P45974 858 aa13.69□□□□□ -0.22
SHPRH-207ENST00000519632 SEPT14Q6ZU15 432 aa13.69□□□□□ -0.22
SHPRH-207ENST00000519632 SF3A3Q12874 501 aaKnown RBP eCLIP13.69□□□□□ -0.22
SHPRH-207ENST00000519632 CASP8Q14790 479 aa13.69□□□□□ -0.22
SHPRH-207ENST00000519632 CC2D1AQ6P1N0 951 aaPredicted RBP13.69□□□□□ -0.22
SHPRH-207ENST00000519632 ARHGEF2Q92974 986 aaKnown RBP13.69□□□□□ -0.22
SHPRH-207ENST00000519632 TSKSQ9UJT2 592 aa13.69□□□□□ -0.22
SHPRH-207ENST00000519632 ZBTB12Q9Y330 459 aaPredicted RBP13.69□□□□□ -0.22
SHPRH-207ENST00000519632 NBPF7P0C2Y1 421 aaPredicted RBP13.68□□□□□ -0.22
SHPRH-207ENST00000519632 CTNNA2P26232 953 aa13.68□□□□□ -0.22
SHPRH-207ENST00000519632 RNASE9P60153 205 aaKnown RBP13.68□□□□□ -0.22
SHPRH-207ENST00000519632 CETN1Q12798 172 aa13.68□□□□□ -0.22
SHPRH-207ENST00000519632 CALCOCO2Q13137 446 aa13.68□□□□□ -0.22
SHPRH-207ENST00000519632 UTP11Q9Y3A2 253 aaKnown RBP13.68□□□□□ -0.22
SHPRH-207ENST00000519632 MAP7Q14244 749 aa13.68□□□□□ -0.22
SHPRH-207ENST00000519632 TOM1L2Q6ZVM7 507 aa13.68□□□□□ -0.22
SHPRH-207ENST00000519632 CCDC63Q8NA47 563 aa13.68□□□□□ -0.22
SHPRH-207ENST00000519632 RAB3IPQ96QF0 476 aaPredicted RBP13.68□□□□□ -0.22
SHPRH-207ENST00000519632 NUP58Q9BVL2 599 aa13.68□□□□□ -0.22
SHPRH-207ENST00000519632 PA2G4Q9UQ80 394 aaKnown RBP13.68□□□□□ -0.22
SHPRH-207ENST00000519632 CD109Q6YHK3 1445 aa13.68□□□□□ -0.22
SHPRH-207ENST00000519632 CCDC174Q6PII3 467 aa13.68□□□□□ -0.22
SHPRH-207ENST00000519632 STAG1Q8WVM7 1258 aa13.68□□□□□ -0.22
SHPRH-207ENST00000519632 PSMB7Q99436 277 aa13.68□□□□□ -0.22
SHPRH-207ENST00000519632 PLCB1Q9NQ66 1216 aa13.68□□□□□ -0.22
SHPRH-207ENST00000519632 RBM6P78332 1123 aaKnown RBP13.68□□□□□ -0.22
SHPRH-207ENST00000519632 ATP2B2Q01814 1243 aa13.68□□□□□ -0.22
SHPRH-207ENST00000519632 BIRC2Q13490 618 aa13.68□□□□□ -0.22
SHPRH-207ENST00000519632 TTF1Q15361 905 aaPredicted RBP13.68□□□□□ -0.22
SHPRH-207ENST00000519632 C11orf57Q6ZUT1 292 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms