RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	TAOK2	Q9UL54	1235 aa		13.01	□□□□□ -0.33
CHTF8-206	ENST00000519534	PITPNM2	Q9BZ72	1349 aa		13.01	□□□□□ -0.33
CHTF8-206	ENST00000519534	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.01	□□□□□ -0.33
CHTF8-206	ENST00000519534	AKAP11	Q9UKA4	1901 aa		13.01	□□□□□ -0.33
CHTF8-206	ENST00000519534	SCN9A	Q15858	1988 aa		13.01	□□□□□ -0.33
CHTF8-206	ENST00000519534	CHD4	Q14839	1912 aa		13	□□□□□ -0.33
CHTF8-206	ENST00000519534	MAGEB6P1	A0A0J9YX57	407 aa		13	□□□□□ -0.33
CHTF8-206	ENST00000519534	CHML	P26374	656 aa		13	□□□□□ -0.33
CHTF8-206	ENST00000519534	HIRA	P54198	1017 aa	Predicted RBP	13	□□□□□ -0.33
CHTF8-206	ENST00000519534	RHBDL3	P58872	404 aa		13	□□□□□ -0.33
CHTF8-206	ENST00000519534	SPDYE2	Q495Y8	402 aa		13	□□□□□ -0.33
CHTF8-206	ENST00000519534	GIMAP6	Q6P9H5	292 aa		13	□□□□□ -0.33
CHTF8-206	ENST00000519534	SAMD7	Q7Z3H4	446 aa		13	□□□□□ -0.33
CHTF8-206	ENST00000519534	FAM83A	Q86UY5	434 aa		13	□□□□□ -0.33
CHTF8-206	ENST00000519534	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13	□□□□□ -0.33
CHTF8-206	ENST00000519534	DIAPH3	Q9NSV4	1193 aa		13	□□□□□ -0.33
CHTF8-206	ENST00000519534	RAD50	Q92878	1312 aa		12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	EPB41L2	O43491	1005 aa	Known RBP	12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	ENTPD3	O75355	529 aa		12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	YY1	P25490	414 aa		12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	BTD	P43251	543 aa		12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	TNFAIP1	Q13829	316 aa		12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	CDC42EP5	Q6NZY7	148 aa		12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	OSBP2	Q969R2	916 aa		12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	AIDA	Q96BJ3	306 aa		12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	STRBP	Q96SI9	672 aa	Known RBP	12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	PUS7L	Q9H0K6	701 aa	Known RBP	12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	ATP8A2	Q9NTI2	1148 aa		12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	USP40	Q9NVE5	1235 aa		12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	TMOD2	Q9NZR1	351 aa		12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	PPP2R3B	Q9Y5P8	575 aa		12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	WDR90	Q96KV7	1748 aa		12.99	□□□□□ -0.33
CHTF8-206	ENST00000519534	PSME4	Q14997	1843 aa		12.98	□□□□□ -0.33
CHTF8-206	ENST00000519534	CDC45	O75419	566 aa		12.98	□□□□□ -0.33
CHTF8-206	ENST00000519534	TNNI2	P48788	182 aa		12.98	□□□□□ -0.33
CHTF8-206	ENST00000519534	NBPF9	Q3BBW0	867 aa		12.98	□□□□□ -0.33
CHTF8-206	ENST00000519534	RBM26	Q5T8P6	1007 aa	Known RBP	12.98	□□□□□ -0.33
CHTF8-206	ENST00000519534	ADGRA1	Q86SQ6	560 aa		12.98	□□□□□ -0.33
CHTF8-206	ENST00000519534	LDHD	Q86WU2	507 aa		12.98	□□□□□ -0.33
CHTF8-206	ENST00000519534	SKAP1	Q86WV1	359 aa		12.98	□□□□□ -0.33
CHTF8-206	ENST00000519534	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.98	□□□□□ -0.33
CHTF8-206	ENST00000519534	CRNKL1	Q9BZJ0	848 aa	Known RBP	12.98	□□□□□ -0.33
CHTF8-206	ENST00000519534	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
CHTF8-206	ENST00000519534	ZNF70	Q9UC06	446 aa	Predicted RBP	12.98	□□□□□ -0.33
CHTF8-206	ENST00000519534	SHTN1	A0MZ66	631 aa		12.97	□□□□□ -0.33
CHTF8-206	ENST00000519534	PATL2	C9JE40	543 aa	Known RBP	12.97	□□□□□ -0.33
CHTF8-206	ENST00000519534	TRPM4	Q8TD43	1214 aa		12.97	□□□□□ -0.33
CHTF8-206	ENST00000519534	DCPS	Q96C86	337 aa	Known RBP	12.97	□□□□□ -0.33
CHTF8-206	ENST00000519534	DHX36	Q9H2U1	1008 aa	Known RBP	12.97	□□□□□ -0.33
CHTF8-206	ENST00000519534	TDRD3	Q9H7E2	651 aa	Known RBP	12.97	□□□□□ -0.33
CHTF8-206	ENST00000519534	CCDC88A	Q3V6T2	1871 aa		12.97	□□□□□ -0.33
CHTF8-206	ENST00000519534	SGSM2	O43147	1006 aa		12.96	□□□□□ -0.33
CHTF8-206	ENST00000519534	GPAA1	O43292	621 aa		12.96	□□□□□ -0.33
CHTF8-206	ENST00000519534	WDHD1	O75717	1129 aa	Predicted RBP	12.96	□□□□□ -0.33
CHTF8-206	ENST00000519534	EGFR	P00533	1210 aa		12.96	□□□□□ -0.33
CHTF8-206	ENST00000519534	NMI	Q13287	307 aa	Predicted RBP	12.96	□□□□□ -0.33
CHTF8-206	ENST00000519534	ALX1	Q15699	326 aa		12.96	□□□□□ -0.33
CHTF8-206	ENST00000519534	CWC27	Q6UX04	472 aa	Known RBP	12.96	□□□□□ -0.33
CHTF8-206	ENST00000519534	CDC37L1	Q7L3B6	337 aa		12.96	□□□□□ -0.33
CHTF8-206	ENST00000519534	MIGA1	Q8NAN2	632 aa		12.96	□□□□□ -0.33
CHTF8-206	ENST00000519534	FAM151A	Q8WW52	585 aa		12.96	□□□□□ -0.33
CHTF8-206	ENST00000519534	FAM227B	Q96M60	508 aa		12.96	□□□□□ -0.33
CHTF8-206	ENST00000519534	NMRK2	Q9NPI5	230 aa		12.96	□□□□□ -0.33
CHTF8-206	ENST00000519534	MKRN1	Q9UHC7	482 aa	Known RBP	12.96	□□□□□ -0.33
CHTF8-206	ENST00000519534	TIAM2	Q8IVF5	1701 aa		12.96	□□□□□ -0.34
CHTF8-206	ENST00000519534		A0A0D9SFI3	127 aa		12.95	□□□□□ -0.34
CHTF8-206	ENST00000519534	MBD4	O95243	580 aa		12.95	□□□□□ -0.34
CHTF8-206	ENST00000519534	TEX11	Q8IYF3	940 aa		12.95	□□□□□ -0.34
CHTF8-206	ENST00000519534	HOOK2	Q96ED9	719 aa		12.95	□□□□□ -0.34
CHTF8-206	ENST00000519534	DDRGK1	Q96HY6	314 aa		12.95	□□□□□ -0.34
CHTF8-206	ENST00000519534	DSCC1	Q9BVC3	393 aa		12.95	□□□□□ -0.34
CHTF8-206	ENST00000519534	NACAP1	Q9BZK3	213 aa		12.95	□□□□□ -0.34
CHTF8-206	ENST00000519534	ZNF646	O15015	1829 aa	Predicted RBP	12.95	□□□□□ -0.34
CHTF8-206	ENST00000519534	SCN4A	P35499	1836 aa		12.95	□□□□□ -0.34
CHTF8-206	ENST00000519534	CCDC171	Q6TFL3	1326 aa		12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	KIF3C	O14782	793 aa		12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	TOMM70	O94826	608 aa		12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	CHGB	P05060	677 aa		12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	DYNLL1	P63167	89 aa	Known RBP	12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	SBK1	Q52WX2	424 aa		12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	ANGEL2	Q5VTE6	544 aa	Known RBP	12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	SULF1	Q8IWU6	871 aa		12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	LCORL	Q8N3X6	602 aa		12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	SEC62	Q99442	399 aa	Known RBP	12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	ESYT1	Q9BSJ8	1104 aa		12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	DEFB129	Q9H1M3	183 aa		12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	ARMT1	Q9H993	441 aa		12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	FAM198A	Q9UFP1	575 aa		12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	PCDHAC2	Q9Y5I4	1007 aa		12.94	□□□□□ -0.34
CHTF8-206	ENST00000519534	ZMYM6	O95789	1325 aa		12.93	□□□□□ -0.34
CHTF8-206	ENST00000519534	GSG1L2	A8MUP6	293 aa		12.93	□□□□□ -0.34
CHTF8-206	ENST00000519534		M0R2C6	588 aa		12.93	□□□□□ -0.34
CHTF8-206	ENST00000519534	USP5	P45974	858 aa		12.93	□□□□□ -0.34
CHTF8-206	ENST00000519534	NT5C2	P49902	561 aa		12.93	□□□□□ -0.34
CHTF8-206	ENST00000519534	MAP3K10	Q02779	954 aa		12.93	□□□□□ -0.34
CHTF8-206	ENST00000519534	SUPT20HL1	Q3ZLR7	823 aa		12.93	□□□□□ -0.34
CHTF8-206	ENST00000519534	SLFNL1	Q499Z3	407 aa		12.93	□□□□□ -0.34

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