RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 DIXDC1Q155Q3 683 aa17.21■□□□□ 0.35
CLN8-204ENST00000519254 BLOC1S2Q6QNY1 142 aa17.21■□□□□ 0.35
CLN8-204ENST00000519254 CERS5Q8N5B7 392 aa17.21■□□□□ 0.35
CLN8-204ENST00000519254 ALDH8A1Q9H2A2 487 aaPredicted RBP17.21■□□□□ 0.35
CLN8-204ENST00000519254 ARMT1Q9H993 441 aa17.21■□□□□ 0.35
CLN8-204ENST00000519254 USP17L3A6NCW0 530 aa17.2■□□□□ 0.34
CLN8-204ENST00000519254 USP17L4A6NCW7 530 aa17.2■□□□□ 0.34
CLN8-204ENST00000519254 NUCB2P80303 420 aa17.2■□□□□ 0.34
CLN8-204ENST00000519254 PKP1Q13835 747 aa17.2■□□□□ 0.34
CLN8-204ENST00000519254 ARHGAP27Q6ZUM4 889 aa17.2■□□□□ 0.34
CLN8-204ENST00000519254 USP17L1Q7RTZ2 530 aa17.2■□□□□ 0.34
CLN8-204ENST00000519254 VPS33BQ9H267 617 aa17.2■□□□□ 0.34
CLN8-204ENST00000519254 MAGEB6P1A0A0J9YX57 407 aa17.2■□□□□ 0.34
CLN8-204ENST00000519254 LARGE1O95461 756 aa17.2■□□□□ 0.34
CLN8-204ENST00000519254 STRIP1Q5VSL9 837 aa17.2■□□□□ 0.34
CLN8-204ENST00000519254 STOX1Q6ZVD7 989 aa17.2■□□□□ 0.34
CLN8-204ENST00000519254 LCORLQ8N3X6 602 aa17.2■□□□□ 0.34
CLN8-204ENST00000519254 RAD17O75943 681 aa17.19■□□□□ 0.34
CLN8-204ENST00000519254 GSTO1P78417 241 aa17.19■□□□□ 0.34
CLN8-204ENST00000519254 DACT2Q5SW24 774 aa17.19■□□□□ 0.34
CLN8-204ENST00000519254 JDP2Q8WYK2 163 aa17.19■□□□□ 0.34
CLN8-204ENST00000519254 ZDHHC9Q9Y397 364 aa17.19■□□□□ 0.34
CLN8-204ENST00000519254 LTBP3Q9NS15 1303 aa17.18■□□□□ 0.34
CLN8-204ENST00000519254 APPP05067 770 aa17.18■□□□□ 0.34
CLN8-204ENST00000519254 DYNLL1P63167 89 aaKnown RBP17.18■□□□□ 0.34
CLN8-204ENST00000519254 CLEC17AQ6ZS10 378 aa17.18■□□□□ 0.34
CLN8-204ENST00000519254 TCEANC2Q96MN5 208 aa17.18■□□□□ 0.34
CLN8-204ENST00000519254 NEK1Q96PY6 1258 aa17.18■□□□□ 0.34
CLN8-204ENST00000519254 STRBPQ96SI9 672 aaKnown RBP17.18■□□□□ 0.34
CLN8-204ENST00000519254 AATFQ9NY61 560 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLN8-204ENST00000519254 ZNRF3Q9ULT6 936 aa17.18■□□□□ 0.34
CLN8-204ENST00000519254 TTF2Q9UNY4 1162 aaKnown RBP17.18■□□□□ 0.34
CLN8-204ENST00000519254 SCNN1DP51172 638 aa17.17■□□□□ 0.34
CLN8-204ENST00000519254 KIAA0825Q8IV33 1275 aa17.17■□□□□ 0.34
CLN8-204ENST00000519254 ZSCAN31Q96LW9 406 aaPredicted RBP17.17■□□□□ 0.34
CLN8-204ENST00000519254 ZNF646O15015 1829 aaPredicted RBP17.17■□□□□ 0.34
CLN8-204ENST00000519254 YBX3P16989 372 aaKnown RBP eCLIP17.17■□□□□ 0.34
CLN8-204ENST00000519254 PRELPP51888 382 aa17.17■□□□□ 0.34
CLN8-204ENST00000519254 TOB2Q14106 344 aaPredicted RBP17.17■□□□□ 0.34
CLN8-204ENST00000519254 SH2B1Q9NRF2 756 aaPredicted RBP17.17■□□□□ 0.34
CLN8-204ENST00000519254 TPCN1Q9ULQ1 816 aa17.17■□□□□ 0.34
CLN8-204ENST00000519254 SLC4A4Q9Y6R1 1079 aa17.17■□□□□ 0.34
CLN8-204ENST00000519254 MYH2Q9UKX2 1941 aa17.17■□□□□ 0.34
CLN8-204ENST00000519254 MROH7-TTC4A0A0A0MT08 1334 aa17.16■□□□□ 0.34
CLN8-204ENST00000519254 PSMD14O00487 310 aa17.16■□□□□ 0.34
CLN8-204ENST00000519254 PRKAB2O43741 272 aa17.16■□□□□ 0.34
CLN8-204ENST00000519254 FGAP02671 866 aa17.16■□□□□ 0.34
CLN8-204ENST00000519254 LDHCP07864 332 aa17.16■□□□□ 0.34
CLN8-204ENST00000519254 ME3Q16798 604 aa17.16■□□□□ 0.34
CLN8-204ENST00000519254 RIOK1Q9BRS2 568 aaKnown RBP17.16■□□□□ 0.34
CLN8-204ENST00000519254 NOL10Q9BSC4 688 aaKnown RBP17.16■□□□□ 0.34
CLN8-204ENST00000519254 CTNNA3Q9UI47 895 aa17.16■□□□□ 0.34
CLN8-204ENST00000519254 SUGT1Q9Y2Z0 365 aa17.16■□□□□ 0.34
CLN8-204ENST00000519254 ST3GAL1Q11201 340 aa17.15■□□□□ 0.34
CLN8-204ENST00000519254 ANKRD1Q15327 319 aa17.15■□□□□ 0.34
CLN8-204ENST00000519254 SLF2Q8IX21 1173 aa17.15■□□□□ 0.34
CLN8-204ENST00000519254 GBP4Q96PP9 640 aa17.15■□□□□ 0.34
CLN8-204ENST00000519254 PSME4Q14997 1843 aa17.15■□□□□ 0.34
CLN8-204ENST00000519254 E7EWF7 191 aa17.15■□□□□ 0.34
CLN8-204ENST00000519254 IGSF3O75054 1194 aa17.15■□□□□ 0.34
CLN8-204ENST00000519254 BTDP43251 543 aa17.15■□□□□ 0.34
CLN8-204ENST00000519254 FKBP1AP62942 108 aaKnown RBP17.15■□□□□ 0.34
CLN8-204ENST00000519254 TMED8Q6PL24 325 aaPredicted RBP17.15■□□□□ 0.34
CLN8-204ENST00000519254 SDR42E1Q8WUS8 393 aa17.15■□□□□ 0.34
CLN8-204ENST00000519254 ADAMTSL1Q8N6G6 1762 aa17.15■□□□□ 0.34
CLN8-204ENST00000519254 GNAT2P19087 354 aa17.14■□□□□ 0.33
CLN8-204ENST00000519254 CXCL9Q07325 125 aa17.14■□□□□ 0.33
CLN8-204ENST00000519254 ZBTB12Q9Y330 459 aaPredicted RBP17.14■□□□□ 0.33
CLN8-204ENST00000519254 DDX11L8A8MPP1 907 aa17.13■□□□□ 0.33
CLN8-204ENST00000519254 PATL2C9JE40 543 aaKnown RBP17.13■□□□□ 0.33
CLN8-204ENST00000519254 BAG4O95429 457 aaKnown RBP17.13■□□□□ 0.33
CLN8-204ENST00000519254 BAG3O95817 575 aa17.13■□□□□ 0.33
CLN8-204ENST00000519254 HMGB1P09429 215 aaKnown RBP17.13■□□□□ 0.33
CLN8-204ENST00000519254 RSBN1LQ6PCB5 846 aaPredicted RBP17.13■□□□□ 0.33
CLN8-204ENST00000519254 CCDC83Q8IWF9 413 aa17.13■□□□□ 0.33
CLN8-204ENST00000519254 EPB41L4AQ9HCS5 686 aaPredicted RBP17.13■□□□□ 0.33
CLN8-204ENST00000519254 DAGLAQ9Y4D2 1042 aa17.13■□□□□ 0.33
CLN8-204ENST00000519254 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.13■□□□□ 0.33
CLN8-204ENST00000519254 GSG1L2A8MUP6 293 aa17.12■□□□□ 0.33
CLN8-204ENST00000519254 BRD1O95696 1058 aa17.12■□□□□ 0.33
CLN8-204ENST00000519254 TDO2P48775 406 aa17.12■□□□□ 0.33
CLN8-204ENST00000519254 RBM5P52756 815 aaKnown RBP eCLIP17.12■□□□□ 0.33
CLN8-204ENST00000519254 HAND2P61296 217 aa17.12■□□□□ 0.33
CLN8-204ENST00000519254 EXOSC10Q01780 885 aaKnown RBP17.12■□□□□ 0.33
CLN8-204ENST00000519254 GPR162Q16538 588 aa17.12■□□□□ 0.33
CLN8-204ENST00000519254 CIAPIN1Q6FI81 312 aa17.12■□□□□ 0.33
CLN8-204ENST00000519254 Q6ZUG5 572 aa17.12■□□□□ 0.33
CLN8-204ENST00000519254 DHX32Q7L7V1 743 aaKnown RBP17.12■□□□□ 0.33
CLN8-204ENST00000519254 NECAB1Q8N987 351 aa17.12■□□□□ 0.33
CLN8-204ENST00000519254 SH3RF3Q8TEJ3 882 aaPredicted RBP17.12■□□□□ 0.33
CLN8-204ENST00000519254 TEKT1Q969V4 418 aa17.12■□□□□ 0.33
CLN8-204ENST00000519254 CRNKL1Q9BZJ0 848 aaKnown RBP17.12■□□□□ 0.33
CLN8-204ENST00000519254 NAPBQ9H115 298 aa17.12■□□□□ 0.33
CLN8-204ENST00000519254 VIL1P09327 827 aaKnown RBP17.12■□□□□ 0.33
CLN8-204ENST00000519254 IMMTQ16891 758 aaKnown RBP17.12■□□□□ 0.33
CLN8-204ENST00000519254 IFNL3Q8IZI9 196 aa17.12■□□□□ 0.33
CLN8-204ENST00000519254 NACAP1Q9BZK3 213 aa17.12■□□□□ 0.33
CLN8-204ENST00000519254 GAKO14976 1311 aa17.11■□□□□ 0.33
CLN8-204ENST00000519254 MYO3BQ8WXR4 1341 aa17.11■□□□□ 0.33
CLN8-204ENST00000519254 GPR75-ASB3A0A0A6YYF3 556 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms