RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 NT5C1AQ9BXI3 368 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 BHLHE41Q9C0J9 482 aaPredicted RBP6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 ZNF408Q9H9D4 720 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 GINM1Q9NU53 330 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 GPN3Q9UHW5 284 aaPredicted RBP6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 TLR6Q9Y2C9 796 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 USP47Q96K76 1375 aa6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 EIF2AK4Q9P2K8 1649 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-212ENST00000518919 FRMPD1Q5SYB0 1578 aa6.52□□□□□ -1.36
CTNNA1-212ENST00000518919 PRAG1Q86YV5 1406 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 TRPM2O94759 1503 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 TLDC2A0PJX2 215 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 SOBPA7XYQ1 873 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 BNIP3LO60238 219 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 PF4P02776 101 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 APOBRQ0VD83 1088 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 COL9A2Q14055 689 aaPredicted RBP6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 NFE2L2Q16236 605 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 SPRED3Q2MJR0 410 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 SDE2Q6IQ49 451 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 TTBK2Q6IQ55 1244 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 FBXL19Q6PCT2 694 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 AFAP1Q8N556 730 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 CEP120Q8N960 986 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 TMEM102Q8N9M5 508 aaPredicted RBP6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 ASAP3Q8TDY4 903 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 MRFAP1L1Q96HT8 127 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 ZNF576Q9H609 170 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 KCNQ5Q9NR82 932 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 NDFIP2Q9NV92 336 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 TBX22Q9Y458 520 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 BCORL1Q5H9F3 1711 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 CFAP74Q9C0B2 1584 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 E9PCH4 1651 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 TET3O43151 1660 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 KIDINS220Q9ULH0 1771 aa6.52□□□□□ -1.37
CTNNA1-212ENST00000518919 KIF7Q2M1P5 1343 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 PTPRTO14522 1441 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 POLR1AO95602 1720 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 A0A096LPE4 126 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 A0A1W2PPZ6 126 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 SLC35F4A4IF30 521 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 CCER2I3L3R5 266 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 K7ELQ4 463 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 ENC1O14682 589 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 DGAT1O75907 488 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 LMNB1P20700 586 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 GARTP22102 1010 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 SOX9P48436 509 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 GPLD1P80108 840 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 LMNB2Q03252 620 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 CAMK2GQ13555 558 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 TRIM22Q8IYM9 498 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 GOLM1Q8NBJ4 401 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 CPLX3Q8WVH0 158 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 NECAB3Q96P71 396 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 UBP1Q9NZI7 540 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 ATXN7L1Q9ULK2 861 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 MRVI1Q9Y6F6 885 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 ZNF518AQ6AHZ1 1483 aa6.51□□□□□ -1.37
CTNNA1-212ENST00000518919 CD109Q6YHK3 1445 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 TRPM1Q7Z4N2 1603 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 RNF17Q9BXT8 1623 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 GPRASP1Q5JY77 1395 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 DHX29Q7Z478 1369 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 PDE2AO00408 941 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 MLLT1Q03111 559 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 DBN1Q16643 649 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 RPS26P11Q5JNZ5 115 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 PCNX4Q63HM2 1172 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 ZNF746Q6NUN9 644 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 AGMOQ6ZNB7 445 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 CRIPAKQ8N1N5 446 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 NXPE3Q969Y0 559 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 TRIM55Q9BYV6 548 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 ATP13A2Q9NQ11 1180 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 SEC31BQ9NQW1 1179 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 HCN2Q9UL51 889 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 PHF24Q9UPV7 400 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 LAMC1P11047 1609 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 CLTCL1P53675 1640 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 ABCA6Q8N139 1617 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 EFCAB6Q5THR3 1501 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 LMTK2Q8IWU2 1503 aa6.5□□□□□ -1.37
CTNNA1-212ENST00000518919 HECW2Q9P2P5 1572 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 NEO1Q92859 1461 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 MLH3Q9UHC1 1453 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 NFKBIEO00221 500 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 U2SURPO15042 1029 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 ANP32CO43423 234 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 GREM1O60565 184 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 GHRHP01286 108 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 EIF2AK2P19525 551 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 TFE3P19532 575 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 FGFR3P22607 806 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 RPS26P62854 115 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 ATP11AP98196 1134 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 TBC1D8BQ0IIM8 1120 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 FAAP100Q0VG06 881 aa6.49□□□□□ -1.37
CTNNA1-212ENST00000518919 SERINC3Q13530 473 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms