RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 MCAMP43121 646 aa15.09■□□□□ 0.01
MRPS28-202ENST00000518271 NFIAQ12857 509 aa15.09■□□□□ 0.01
MRPS28-202ENST00000518271 C20orf194Q5TEA3 1177 aa15.09■□□□□ 0.01
MRPS28-202ENST00000518271 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.09■□□□□ 0.01
MRPS28-202ENST00000518271 WNK4Q96J92 1243 aa15.09■□□□□ 0.01
MRPS28-202ENST00000518271 DBNDD2Q9BQY9 259 aa15.09■□□□□ 0.01
MRPS28-202ENST00000518271 TLR7Q9NYK1 1049 aaKnown RBP15.09■□□□□ 0.01
MRPS28-202ENST00000518271 FAM198AQ9UFP1 575 aa15.09■□□□□ 0.01
MRPS28-202ENST00000518271 COG6Q9Y2V7 657 aa15.09■□□□□ 0.01
MRPS28-202ENST00000518271 ATRNL1Q5VV63 1379 aa15.09■□□□□ 0.01
MRPS28-202ENST00000518271 PHIPQ8WWQ0 1821 aa15.08■□□□□ 0.01
MRPS28-202ENST00000518271 PTPRFP10586 1907 aa15.08■□□□□ 0
MRPS28-202ENST00000518271 UNCXA6NJT0 531 aa15.08■□□□□ 0
MRPS28-202ENST00000518271 TRPA1O75762 1119 aa15.08■□□□□ 0
MRPS28-202ENST00000518271 TM4SF4P48230 202 aa15.08■□□□□ 0
MRPS28-202ENST00000518271 TNNI2P48788 182 aa15.08■□□□□ 0
MRPS28-202ENST00000518271 SIRT2Q8IXJ6 389 aa15.08■□□□□ 0
MRPS28-202ENST00000518271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.08■□□□□ 0
MRPS28-202ENST00000518271 ZBTB40Q9NUA8 1239 aa15.08■□□□□ 0
MRPS28-202ENST00000518271 DBNLQ9UJU6 430 aaKnown RBP15.08■□□□□ 0
MRPS28-202ENST00000518271 IREB2P48200 963 aaKnown RBP15.07■□□□□ 0
MRPS28-202ENST00000518271 TBC1D9Q6ZT07 1266 aa15.07■□□□□ 0
MRPS28-202ENST00000518271 REM2Q8IYK8 340 aaPredicted RBP15.07■□□□□ 0
MRPS28-202ENST00000518271 ZGPATQ8N5A5 531 aaKnown RBP15.07■□□□□ 0
MRPS28-202ENST00000518271 SPATA5Q8NB90 893 aa15.07■□□□□ 0
MRPS28-202ENST00000518271 CNKSR2Q8WXI2 1034 aa15.07■□□□□ 0
MRPS28-202ENST00000518271 TMOD2Q9NZR1 351 aa15.07■□□□□ 0
MRPS28-202ENST00000518271 ATAD5Q96QE3 1844 aa15.07■□□□□ 0
MRPS28-202ENST00000518271 DOCK1Q14185 1865 aa15.07■□□□□ 0
MRPS28-202ENST00000518271 ZBTB48P10074 688 aaPredicted RBP15.06■□□□□ 0
MRPS28-202ENST00000518271 MS4A1P11836 297 aa15.06■□□□□ 0
MRPS28-202ENST00000518271 MECOMQ03112 1051 aa15.06■□□□□ 0
MRPS28-202ENST00000518271 VGLL4Q14135 290 aa15.06■□□□□ 0
MRPS28-202ENST00000518271 ZFPM1Q8IX07 1006 aa15.06■□□□□ 0
MRPS28-202ENST00000518271 ANKRD13AQ8IZ07 590 aa15.06■□□□□ 0
MRPS28-202ENST00000518271 EAF2Q96CJ1 260 aaPredicted RBP15.06■□□□□ 0
MRPS28-202ENST00000518271 SLC10A4Q96EP9 437 aa15.06■□□□□ 0
MRPS28-202ENST00000518271 FAM163AQ96GL9 167 aaPredicted RBP15.06■□□□□ 0
MRPS28-202ENST00000518271 ABCF2Q9UG63 623 aa15.06■□□□□ 0
MRPS28-202ENST00000518271 EXOC6BQ9Y2D4 811 aa15.06■□□□□ 0
MRPS28-202ENST00000518271 MROH7-TTC4A0A0A0MT08 1334 aa15.06■□□□□ 0
MRPS28-202ENST00000518271 TNRC18O15417 2968 aaPredicted RBP15.05■□□□□ 0
MRPS28-202ENST00000518271 WDHD1O75717 1129 aaPredicted RBP15.05■□□□□ -0
MRPS28-202ENST00000518271 RHBDL3P58872 404 aa15.05■□□□□ -0
MRPS28-202ENST00000518271 OS9Q13438 667 aaPredicted RBP15.05■□□□□ -0
MRPS28-202ENST00000518271 DZIP1Q86YF9 867 aaKnown RBP15.05■□□□□ -0
MRPS28-202ENST00000518271 FAM151AQ8WW52 585 aa15.05■□□□□ -0
MRPS28-202ENST00000518271 NSUN4Q96CB9 384 aaKnown RBP15.05■□□□□ -0
MRPS28-202ENST00000518271 R3HDMLQ9H3Y0 253 aa15.05■□□□□ -0
MRPS28-202ENST00000518271 ELP3Q9H9T3 547 aa15.05■□□□□ -0
MRPS28-202ENST00000518271 DDX4Q9NQI0 724 aaKnown RBP15.05■□□□□ -0
MRPS28-202ENST00000518271 USP40Q9NVE5 1235 aa15.05■□□□□ -0
MRPS28-202ENST00000518271 DDX19BQ9UMR2 479 aa15.05■□□□□ -0
MRPS28-202ENST00000518271 SNCAIPQ9Y6H5 919 aa15.05■□□□□ -0
MRPS28-202ENST00000518271 CENPFP49454 3210 aa15.05■□□□□ -0
MRPS28-202ENST00000518271 IGF2BP3O00425 579 aaKnown RBP eCLIP15.04■□□□□ -0
MRPS28-202ENST00000518271 CAPN15O75808 1086 aa15.04■□□□□ -0
MRPS28-202ENST00000518271 UQCRFS1P1P0C7P4 283 aa15.04■□□□□ -0
MRPS28-202ENST00000518271 SREBF2Q12772 1141 aa15.04■□□□□ -0
MRPS28-202ENST00000518271 TCP10Q12799 353 aa15.04■□□□□ -0
MRPS28-202ENST00000518271 GORABQ5T7V8 394 aa15.04■□□□□ -0
MRPS28-202ENST00000518271 SH3BP5LQ7L8J4 393 aa15.04■□□□□ -0
MRPS28-202ENST00000518271 ZNF512BQ96KM6 892 aaPredicted RBP15.04■□□□□ -0
MRPS28-202ENST00000518271 CFHR5Q9BXR6 569 aa15.04■□□□□ -0
MRPS28-202ENST00000518271 IDI2Q9BXS1 227 aa15.04■□□□□ -0
MRPS28-202ENST00000518271 SNRKQ9NRH2 765 aa15.04■□□□□ -0
MRPS28-202ENST00000518271 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.04■□□□□ -0
MRPS28-202ENST00000518271 MYH7P12883 1935 aa15.04■□□□□ -0
MRPS28-202ENST00000518271 DDX60LQ5H9U9 1706 aaKnown RBP15.03■□□□□ -0
MRPS28-202ENST00000518271 GPR75-ASB3A0A0A6YYF3 556 aa15.03■□□□□ -0
MRPS28-202ENST00000518271 CYP2E1P05181 493 aaPredicted RBP15.03■□□□□ -0
MRPS28-202ENST00000518271 BTDP43251 543 aa15.03■□□□□ -0
MRPS28-202ENST00000518271 RGS3P49796 1198 aa15.03■□□□□ -0
MRPS28-202ENST00000518271 MAP3K9P80192 1104 aa15.03■□□□□ -0
MRPS28-202ENST00000518271 PDE3AQ14432 1141 aa15.03■□□□□ -0
MRPS28-202ENST00000518271 SPTY2D1Q68D10 685 aaPredicted RBP15.03■□□□□ -0
MRPS28-202ENST00000518271 ERICH6Q7L0X2 663 aa15.03■□□□□ -0
MRPS28-202ENST00000518271 OPTNQ96CV9 577 aa15.03■□□□□ -0
MRPS28-202ENST00000518271 MS4A4AQ96JQ5 239 aa15.03■□□□□ -0
MRPS28-202ENST00000518271 CCDC8Q9H0W5 538 aaPredicted RBP15.03■□□□□ -0
MRPS28-202ENST00000518271 ZSWIM8A7E2V4 1837 aa15.02■□□□□ -0
MRPS28-202ENST00000518271 TESPA1A2RU30 521 aaPredicted RBP15.02■□□□□ -0
MRPS28-202ENST00000518271 MANSC4A6NHS7 340 aaPredicted RBP15.02■□□□□ -0
MRPS28-202ENST00000518271 SPDYE5A6NIY4 337 aa15.02■□□□□ -0
MRPS28-202ENST00000518271 TBC1D8O95759 1140 aa15.02■□□□□ -0
MRPS28-202ENST00000518271 SLURP2P0DP57 97 aa15.02■□□□□ -0
MRPS28-202ENST00000518271 TTC39AQ5SRH9 613 aa15.02■□□□□ -0
MRPS28-202ENST00000518271 IFNL1Q8IU54 200 aa15.02■□□□□ -0
MRPS28-202ENST00000518271 ZKSCAN4Q969J2 545 aaPredicted RBP15.02■□□□□ -0
MRPS28-202ENST00000518271 ABHD8Q96I13 439 aa15.02■□□□□ -0
MRPS28-202ENST00000518271 WRNIP1Q96S55 665 aa15.02■□□□□ -0
MRPS28-202ENST00000518271 PTPN18Q99952 460 aa15.02■□□□□ -0
MRPS28-202ENST00000518271 MCOLN1Q9GZU1 580 aa15.02■□□□□ -0
MRPS28-202ENST00000518271 MYH1P12882 1939 aa15.02□□□□□ -0.01
MRPS28-202ENST00000518271 COL2A1P02458 1487 aaPredicted RBP15.01□□□□□ -0.01
MRPS28-202ENST00000518271 ENTPD3O75355 529 aa15.01□□□□□ -0.01
MRPS28-202ENST00000518271 INPP5BP32019 993 aa15.01□□□□□ -0.01
MRPS28-202ENST00000518271 ZAP70P43403 619 aa15.01□□□□□ -0.01
MRPS28-202ENST00000518271 MIGA2Q7L4E1 593 aa15.01□□□□□ -0.01
MRPS28-202ENST00000518271 ADGRA1Q86SQ6 560 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms