RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 ZBTB12Q9Y330 459 aaPredicted RBP13.04□□□□□ -0.32
SPIDR-206ENST00000518074 TTC41PQ6P2S7 1318 aa13.04□□□□□ -0.32
SPIDR-206ENST00000518074 RAD50Q92878 1312 aa13.04□□□□□ -0.32
SPIDR-206ENST00000518074 CYP2E1P05181 493 aaPredicted RBP13.04□□□□□ -0.32
SPIDR-206ENST00000518074 MCM2P49736 904 aa13.04□□□□□ -0.32
SPIDR-206ENST00000518074 JAKMIP1Q96N16 626 aaKnown RBP13.04□□□□□ -0.32
SPIDR-206ENST00000518074 LMBRD1Q9NUN5 540 aa13.04□□□□□ -0.32
SPIDR-206ENST00000518074 THSD7BQ9C0I4 1608 aa13.04□□□□□ -0.32
SPIDR-206ENST00000518074 CHGBP05060 677 aa13.03□□□□□ -0.32
SPIDR-206ENST00000518074 AK2P54819 239 aa13.03□□□□□ -0.32
SPIDR-206ENST00000518074 ADCK5Q3MIX3 580 aa13.03□□□□□ -0.32
SPIDR-206ENST00000518074 RUFY2Q8WXA3 655 aa13.03□□□□□ -0.32
SPIDR-206ENST00000518074 TCEANC2Q96MN5 208 aa13.03□□□□□ -0.32
SPIDR-206ENST00000518074 DNAJC2Q99543 621 aaKnown RBP13.03□□□□□ -0.32
SPIDR-206ENST00000518074 FKBP1AP62942 108 aaKnown RBP13.03□□□□□ -0.32
SPIDR-206ENST00000518074 TFCP2Q12800 502 aa13.03□□□□□ -0.32
SPIDR-206ENST00000518074 NMIQ13287 307 aaPredicted RBP13.03□□□□□ -0.32
SPIDR-206ENST00000518074 DEFB115Q30KQ5 88 aa13.03□□□□□ -0.32
SPIDR-206ENST00000518074 TLL2Q9Y6L7 1015 aa13.03□□□□□ -0.32
SPIDR-206ENST00000518074 DACT2Q5SW24 774 aa13.03□□□□□ -0.32
SPIDR-206ENST00000518074 EVI5LQ96CN4 794 aa13.03□□□□□ -0.32
SPIDR-206ENST00000518074 PITPNM2Q9BZ72 1349 aa13.02□□□□□ -0.32
SPIDR-206ENST00000518074 USP17L8P0C7I0 530 aa13.02□□□□□ -0.33
SPIDR-206ENST00000518074 PTMSP20962 102 aa13.02□□□□□ -0.33
SPIDR-206ENST00000518074 KLHL40Q2TBA0 621 aa13.02□□□□□ -0.33
SPIDR-206ENST00000518074 KIF4BQ2VIQ3 1234 aa13.02□□□□□ -0.33
SPIDR-206ENST00000518074 NEUROD6Q96NK8 337 aa13.02□□□□□ -0.33
SPIDR-206ENST00000518074 PATL2C9JE40 543 aaKnown RBP13.02□□□□□ -0.33
SPIDR-206ENST00000518074 CST9Q5W186 159 aa13.02□□□□□ -0.33
SPIDR-206ENST00000518074 IL1R1P14778 569 aa13.01□□□□□ -0.33
SPIDR-206ENST00000518074 ECE1P42892 770 aa13.01□□□□□ -0.33
SPIDR-206ENST00000518074 UBE4AQ14139 1066 aa13.01□□□□□ -0.33
SPIDR-206ENST00000518074 LDHAL6AQ6ZMR3 332 aa13.01□□□□□ -0.33
SPIDR-206ENST00000518074 DCPSQ96C86 337 aaKnown RBP13.01□□□□□ -0.33
SPIDR-206ENST00000518074 MROH5Q6ZUA9 1318 aa13.01□□□□□ -0.33
SPIDR-206ENST00000518074 A0A0D9SFI3 127 aa13.01□□□□□ -0.33
SPIDR-206ENST00000518074 SHTN1A0MZ66 631 aa13.01□□□□□ -0.33
SPIDR-206ENST00000518074 VEGFBP49765 207 aa13.01□□□□□ -0.33
SPIDR-206ENST00000518074 COL9A3Q14050 684 aaPredicted RBP13.01□□□□□ -0.33
SPIDR-206ENST00000518074 SAMD7Q7Z3H4 446 aa13.01□□□□□ -0.33
SPIDR-206ENST00000518074 CERS3Q8IU89 383 aa13.01□□□□□ -0.33
SPIDR-206ENST00000518074 GPT2Q8TD30 523 aa13.01□□□□□ -0.33
SPIDR-206ENST00000518074 MKRN1Q9UHC7 482 aaKnown RBP13.01□□□□□ -0.33
SPIDR-206ENST00000518074 CLGNO14967 610 aa13□□□□□ -0.33
SPIDR-206ENST00000518074 CUL4AQ13619 759 aa13□□□□□ -0.33
SPIDR-206ENST00000518074 RUFY3Q7L099 469 aa13□□□□□ -0.33
SPIDR-206ENST00000518074 ZNF804AQ7Z570 1209 aa13□□□□□ -0.33
SPIDR-206ENST00000518074 CCDC83Q8IWF9 413 aa13□□□□□ -0.33
SPIDR-206ENST00000518074 PRDM16Q9HAZ2 1276 aa13□□□□□ -0.33
SPIDR-206ENST00000518074 RBM8AQ9Y5S9 174 aaKnown RBP13□□□□□ -0.33
SPIDR-206ENST00000518074 TRAF5O00463 557 aa13□□□□□ -0.33
SPIDR-206ENST00000518074 LARGE1O95461 756 aa13□□□□□ -0.33
SPIDR-206ENST00000518074 TBC1D10BQ4KMP7 808 aaPredicted RBP13□□□□□ -0.33
SPIDR-206ENST00000518074 NECAB1Q8N987 351 aa13□□□□□ -0.33
SPIDR-206ENST00000518074 GLIS2Q9BZE0 524 aaPredicted RBP13□□□□□ -0.33
SPIDR-206ENST00000518074 CD209Q9NNX6 404 aa13□□□□□ -0.33
SPIDR-206ENST00000518074 RRAGDQ9NQL2 400 aaPredicted RBP13□□□□□ -0.33
SPIDR-206ENST00000518074 CNNM1Q9NRU3 951 aa13□□□□□ -0.33
SPIDR-206ENST00000518074 PDRG1Q9NUG6 133 aa13□□□□□ -0.33
SPIDR-206ENST00000518074 RIPOR2Q9Y4F9 1068 aa13□□□□□ -0.33
SPIDR-206ENST00000518074 PTPN12Q05209 780 aaKnown RBP12.99□□□□□ -0.33
SPIDR-206ENST00000518074 ZSCAN23Q3MJ62 389 aa12.99□□□□□ -0.33
SPIDR-206ENST00000518074 TXNRD3Q86VQ6 643 aa12.99□□□□□ -0.33
SPIDR-206ENST00000518074 ZNF594Q96JF6 807 aaPredicted RBP12.99□□□□□ -0.33
SPIDR-206ENST00000518074 DBNDD2Q9BQY9 259 aa12.99□□□□□ -0.33
SPIDR-206ENST00000518074 MYOZ2Q9NPC6 264 aa12.99□□□□□ -0.33
SPIDR-206ENST00000518074 DBNLQ9UJU6 430 aaKnown RBP12.99□□□□□ -0.33
SPIDR-206ENST00000518074 ABT1Q9ULW3 272 aaKnown RBP12.99□□□□□ -0.33
SPIDR-206ENST00000518074 WDR33Q9C0J8 1336 aaKnown RBP12.99□□□□□ -0.33
SPIDR-206ENST00000518074 WTIPA6NIX2 430 aaPredicted RBP12.99□□□□□ -0.33
SPIDR-206ENST00000518074 CLEC17AQ6ZS10 378 aa12.99□□□□□ -0.33
SPIDR-206ENST00000518074 USP48Q86UV5 1035 aa12.99□□□□□ -0.33
SPIDR-206ENST00000518074 LIMCH1Q9UPQ0 1083 aa12.99□□□□□ -0.33
SPIDR-206ENST00000518074 CELF2O95319 508 aaKnown RBP12.98□□□□□ -0.33
SPIDR-206ENST00000518074 BRD1O95696 1058 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 HSPA1AP0DMV8 641 aaKnown RBP12.98□□□□□ -0.33
SPIDR-206ENST00000518074 HSPA1BP0DMV9 641 aaKnown RBP12.98□□□□□ -0.33
SPIDR-206ENST00000518074 ZKSCAN1P17029 563 aaPredicted RBP12.98□□□□□ -0.33
SPIDR-206ENST00000518074 SLFNL1Q499Z3 407 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 TTLL5Q6EMB2 1281 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 CCDC129Q6ZRS4 1044 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 KRT26Q7Z3Y9 468 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 TAF6LQ9Y6J9 622 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 TIMM10P62072 90 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 SCARF1Q14162 830 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 ZNF589Q86UQ0 364 aaPredicted RBP12.98□□□□□ -0.33
SPIDR-206ENST00000518074 OGFOD1Q8N543 542 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 MTMR14Q8NCE2 650 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 HDAC9Q9UKV0 1011 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 SMC3Q9UQE7 1217 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 CYP46A1Q9Y6A2 500 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 CCDC171Q6TFL3 1326 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 MAP2K2P36507 400 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 MAP2K1Q02750 393 aaPredicted RBP12.98□□□□□ -0.33
SPIDR-206ENST00000518074 TNNI3KQ59H18 835 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 CREB3L3Q68CJ9 461 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 SAPCD2Q86UD0 394 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 SEC62Q99442 399 aaKnown RBP12.98□□□□□ -0.33
SPIDR-206ENST00000518074 TMEM51Q9NW97 253 aa12.98□□□□□ -0.33
SPIDR-206ENST00000518074 FPGT-TNNI3KV9GXZ4 949 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 645 ms