RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 TBC1D8O95759 1140 aa5.04□□□□□ -1.6
CPNE3-204ENST00000517862 H2AFB1P0C5Y9 115 aa5.04□□□□□ -1.6
CPNE3-204ENST00000517862 H2AFB2P0C5Z0 115 aa5.04□□□□□ -1.6
CPNE3-204ENST00000517862 RFX1P22670 979 aa5.04□□□□□ -1.6
CPNE3-204ENST00000517862 HMGB2P26583 209 aaKnown RBP5.04□□□□□ -1.6
CPNE3-204ENST00000517862 DGKGP49619 791 aa5.04□□□□□ -1.6
CPNE3-204ENST00000517862 GUCA2AQ02747 115 aa5.04□□□□□ -1.6
CPNE3-204ENST00000517862 SLC4A8Q2Y0W8 1093 aa5.04□□□□□ -1.6
CPNE3-204ENST00000517862 HTATIP2Q9BUP3 242 aa5.04□□□□□ -1.6
CPNE3-204ENST00000517862 HMX1Q9NP08 348 aaPredicted RBP5.04□□□□□ -1.6
CPNE3-204ENST00000517862 PCMTD2Q9NV79 361 aa5.04□□□□□ -1.6
CPNE3-204ENST00000517862 MTMR7Q9Y216 660 aa5.04□□□□□ -1.6
CPNE3-204ENST00000517862 PTPRZ1P23471 2315 aaPredicted RBP5.03□□□□□ -1.6
CPNE3-204ENST00000517862 FAM86C2PA6NEL3 165 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 C6orf229H3BNL8 230 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 SMIM22K7EJ46 135 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 GPR37L1O60883 481 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 LILRB3O75022 631 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 BMP8BP34820 402 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 RELBQ01201 579 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 TMCO4Q5TGY1 634 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 FOXD4L5Q5VV16 416 aaPredicted RBP5.03□□□□□ -1.6
CPNE3-204ENST00000517862 LYSMD3Q7Z3D4 306 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 WWC1Q8IX03 1113 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 FOXD4L4Q8WXT5 416 aaPredicted RBP5.03□□□□□ -1.6
CPNE3-204ENST00000517862 ZNF428Q96B54 188 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 ARMC5Q96C12 935 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 CSRNP1Q96S65 589 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 ZNF408Q9H9D4 720 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 TRIM17Q9Y577 477 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 PARP3Q9Y6F1 533 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 TCF20Q9UGU0 1960 aaKnown RBP5.03□□□□□ -1.6
CPNE3-204ENST00000517862 NSD3Q9BZ95 1437 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 LAMB2P55268 1798 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 C4BP0C0L5 1744 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 DCHS1Q96JQ0 3298 aa5.03□□□□□ -1.6
CPNE3-204ENST00000517862 RNF123Q5XPI4 1314 aa5.02□□□□□ -1.61
CPNE3-204ENST00000517862 WDR17Q8IZU2 1322 aa5.02□□□□□ -1.61
CPNE3-204ENST00000517862 FDX1P10109 184 aa5.02□□□□□ -1.61
CPNE3-204ENST00000517862 SSFA2P28290 1259 aa5.02□□□□□ -1.61
CPNE3-204ENST00000517862 MFAP1P55081 439 aaKnown RBP5.02□□□□□ -1.61
CPNE3-204ENST00000517862 HUNKP57058 714 aa5.02□□□□□ -1.61
CPNE3-204ENST00000517862 HDGFL1Q5TGJ6 251 aa5.02□□□□□ -1.61
CPNE3-204ENST00000517862 VASH1Q7L8A9 365 aaPredicted RBP5.02□□□□□ -1.61
CPNE3-204ENST00000517862 ATXN2LQ8WWM7 1075 aaKnown RBP5.02□□□□□ -1.61
CPNE3-204ENST00000517862 TSC1Q92574 1164 aa5.02□□□□□ -1.61
CPNE3-204ENST00000517862 ASB2Q96Q27 587 aa5.02□□□□□ -1.61
CPNE3-204ENST00000517862 INSRP06213 1382 aa5.02□□□□□ -1.61
CPNE3-204ENST00000517862 ZNF462Q96JM2 2506 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 MAP1BP46821 2468 aaKnown RBP5.01□□□□□ -1.61
CPNE3-204ENST00000517862 FKTNO75072 461 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 FOSL2P15408 326 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 VAC14Q08AM6 782 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 TUSC1Q2TAM9 212 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 RGMBQ6NW40 437 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 TDHQ8IZJ6 230 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 NLGN1Q8N2Q7 840 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 RGS22Q8NE09 1264 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 MYLIPQ8WY64 445 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 FBXL18Q96ME1 805 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 NECAB3Q96P71 396 aaPredicted RBP5.01□□□□□ -1.61
CPNE3-204ENST00000517862 CARD10Q9BWT7 1032 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 RRP7BPQ9NSQ0 103 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 STK26Q9P289 416 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 RNF112Q9ULX5 631 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 NDUFB9Q9Y6M9 179 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 GCN1Q92616 2671 aaKnown RBP5.01□□□□□ -1.61
CPNE3-204ENST00000517862 USP47Q96K76 1375 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 PLEKHH1Q9ULM0 1364 aa5.01□□□□□ -1.61
CPNE3-204ENST00000517862 PPIP5K1Q6PFW1 1433 aa5□□□□□ -1.61
CPNE3-204ENST00000517862 CSB-PGBD3P0DP91 1061 aa5□□□□□ -1.61
CPNE3-204ENST00000517862 TMF1P82094 1093 aa5□□□□□ -1.61
CPNE3-204ENST00000517862 CTDSPL2Q05D32 466 aa5□□□□□ -1.61
CPNE3-204ENST00000517862 CFAP70Q5T0N1 1121 aa5□□□□□ -1.61
CPNE3-204ENST00000517862 BPHLQ86WA6 291 aaPredicted RBP5□□□□□ -1.61
CPNE3-204ENST00000517862 NGDNQ8NEJ9 315 aaKnown RBP5□□□□□ -1.61
CPNE3-204ENST00000517862 GDF15Q99988 308 aa5□□□□□ -1.61
CPNE3-204ENST00000517862 ZBTB3Q9H5J0 574 aa5□□□□□ -1.61
CPNE3-204ENST00000517862 PRM3Q9NNZ6 103 aa5□□□□□ -1.61
CPNE3-204ENST00000517862 C11orf16Q9NQ32 467 aa5□□□□□ -1.61
CPNE3-204ENST00000517862 PCDHGC3Q9UN70 934 aa5□□□□□ -1.61
CPNE3-204ENST00000517862 MAP4K5Q9Y4K4 846 aa5□□□□□ -1.61
CPNE3-204ENST00000517862 PPLO60437 1756 aa4.99□□□□□ -1.61
CPNE3-204ENST00000517862 FER1L6Q2WGJ9 1857 aa4.99□□□□□ -1.61
CPNE3-204ENST00000517862 MED19A0JLT2 244 aaPredicted RBP4.99□□□□□ -1.61
CPNE3-204ENST00000517862 MYCP01106 439 aaPredicted RBP4.99□□□□□ -1.61
CPNE3-204ENST00000517862 ZNF157P51786 506 aaPredicted RBP4.99□□□□□ -1.61
CPNE3-204ENST00000517862 ST3GAL2Q16842 350 aa4.99□□□□□ -1.61
CPNE3-204ENST00000517862 NOM1Q5C9Z4 860 aaKnown RBP4.99□□□□□ -1.61
CPNE3-204ENST00000517862 SLCO4C1Q6ZQN7 724 aa4.99□□□□□ -1.61
CPNE3-204ENST00000517862 OTOP1Q7RTM1 612 aa4.99□□□□□ -1.61
CPNE3-204ENST00000517862 USP38Q8NB14 1042 aa4.99□□□□□ -1.61
CPNE3-204ENST00000517862 EPS8L1Q8TE68 723 aa4.99□□□□□ -1.61
CPNE3-204ENST00000517862 LRRN4Q8WUT4 740 aa4.99□□□□□ -1.61
CPNE3-204ENST00000517862 PBXIP1Q96AQ6 731 aa4.99□□□□□ -1.61
CPNE3-204ENST00000517862 BTBD6Q96KE9 485 aa4.99□□□□□ -1.61
CPNE3-204ENST00000517862 AGBL1Q96MI9 1066 aa4.99□□□□□ -1.61
CPNE3-204ENST00000517862 TRIM34Q9BYJ4 488 aa4.99□□□□□ -1.61
CPNE3-204ENST00000517862 NCOR2Q9Y618 2525 aa4.99□□□□□ -1.61
CPNE3-204ENST00000517862 ZFHX2Q9C0A1 2572 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms