RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 C8orf34Q49A92 452 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 MUM1L1Q5H9M0 696 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 Q6ZS46 218 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 NGEFQ8N5V2 710 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 IL22RA1Q8N6P7 574 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 EXOC6Q8TAG9 804 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 ANKRD7Q92527 254 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 RSPH14Q9UHP6 348 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 TRIM33Q9UPN9 1127 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 V9GYY5 206 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 TONSLQ96HA7 1378 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 NCOA2Q15596 1464 aa5.76□□□□□ -1.49
HMGB1P19-201ENST00000517578 SETD5Q9C0A6 1442 aa5.75□□□□□ -1.49
HMGB1P19-201ENST00000517578 SCRIBQ14160 1630 aa5.75□□□□□ -1.49
HMGB1P19-201ENST00000517578 DHX16O60231 1041 aaKnown RBP5.75□□□□□ -1.49
HMGB1P19-201ENST00000517578 ZNF445P59923 1031 aa5.75□□□□□ -1.49
HMGB1P19-201ENST00000517578 SARNPP82979 210 aaKnown RBP5.75□□□□□ -1.49
HMGB1P19-201ENST00000517578 HSP90AB4PQ58FF6 505 aa5.75□□□□□ -1.49
HMGB1P19-201ENST00000517578 NLRP13Q86W25 1043 aa5.75□□□□□ -1.49
HMGB1P19-201ENST00000517578 CERS3Q8IU89 383 aa5.75□□□□□ -1.49
HMGB1P19-201ENST00000517578 MKL1Q969V6 931 aa5.75□□□□□ -1.49
HMGB1P19-201ENST00000517578 COL26A1Q96A83 441 aa5.75□□□□□ -1.49
HMGB1P19-201ENST00000517578 SUDS3Q9H7L9 328 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P19-201ENST00000517578 SRA1Q9HD15 236 aaKnown RBP5.75□□□□□ -1.49
HMGB1P19-201ENST00000517578 INSRP06213 1382 aa5.75□□□□□ -1.49
HMGB1P19-201ENST00000517578 H0YHG0 523 aa5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 MPHOSPH10O00566 681 aaKnown RBP5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 TNFRSF10BO14763 440 aa5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 FSTP19883 344 aa5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 SSFA2P28290 1259 aa5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 ATP2B3Q16720 1220 aa5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 KLHL40Q2TBA0 621 aa5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 COL13A1Q5TAT6 717 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 AGGF1Q8N302 714 aaeCLIP5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 TBC1D22AQ8WUA7 517 aa5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 CEP89Q96ST8 783 aa5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 DDX41Q9UJV9 622 aaKnown RBP5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 PAXBP1Q9Y5B6 917 aa5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 PRDM2Q13029 1718 aa5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 ERICH3Q5RHP9 1530 aa5.74□□□□□ -1.49
HMGB1P19-201ENST00000517578 EIF3AQ14152 1382 aaKnown RBP5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 CCNB3Q8WWL7 1395 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 KLHL33A6NCF5 533 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 TM4SF5O14894 197 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 CTIFO43310 598 aaKnown RBP5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 CAPN2P17655 700 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 GSCP56915 257 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 TPM4P67936 248 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 NUCB2P80303 420 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 XPCQ01831 940 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 UVSSAQ2YD98 709 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 ADAMTSL4Q6UY14 1074 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 CLEC17AQ6ZS10 378 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 MAP4K3Q8IVH8 894 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 HSCBQ8IWL3 235 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 SUGP1Q8IWZ8 645 aaKnown RBP5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 JMYQ8N9B5 988 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 GALNT11Q8NCW6 608 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 OR13H1Q8NG92 308 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 PIBF1Q8WXW3 757 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 ERCC4Q92889 916 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 FAM107BQ9H098 131 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 TMX4Q9H1E5 349 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 RBSNQ9H1K0 784 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 CXorf56Q9H5V9 222 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 PRDM16Q9HAZ2 1276 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 STIM2Q9P246 746 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 ANAPC4Q9UJX5 808 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 JRKLQ9Y4A0 524 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 VIRMAQ69YN4 1812 aaKnown RBP5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 MAPKBP1O60336 1514 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 KDM2BQ8NHM5 1336 aa5.73□□□□□ -1.49
HMGB1P19-201ENST00000517578 CCDC88BA6NC98 1476 aa5.72□□□□□ -1.49
HMGB1P19-201ENST00000517578 ROCK2O75116 1388 aaKnown RBP5.72□□□□□ -1.49
HMGB1P19-201ENST00000517578 NPC1L1Q9UHC9 1359 aa5.72□□□□□ -1.49
HMGB1P19-201ENST00000517578 WISP1O95388 367 aa5.72□□□□□ -1.49
HMGB1P19-201ENST00000517578 IRX1P78414 480 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P19-201ENST00000517578 ATP11AP98196 1134 aa5.72□□□□□ -1.49
HMGB1P19-201ENST00000517578 MTA1Q13330 715 aa5.72□□□□□ -1.49
HMGB1P19-201ENST00000517578 BMS1Q14692 1282 aaKnown RBP5.72□□□□□ -1.49
HMGB1P19-201ENST00000517578 CT47A1Q5JQC4 288 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P19-201ENST00000517578 LCE3BQ5TA77 95 aa5.72□□□□□ -1.49
HMGB1P19-201ENST00000517578 JAKMIP3Q5VZ66 844 aa5.72□□□□□ -1.49
HMGB1P19-201ENST00000517578 RETREG2Q8NC44 543 aa5.72□□□□□ -1.49
HMGB1P19-201ENST00000517578 GTF3C2Q8WUA4 911 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P19-201ENST00000517578 SUFUQ9UMX1 484 aa5.72□□□□□ -1.49
HMGB1P19-201ENST00000517578 RAB3GAP2Q9H2M9 1393 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 UBAP1LF5GYI3 381 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 ZBTB39O15060 712 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 ABL1P00519 1130 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 IVLP07476 585 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 ATP2B1P20020 1258 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 CYP2C19P33261 490 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 MAP2K2P36507 400 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 ZAP70P43403 619 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 MTMR3Q13615 1198 aa5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 NOLC1Q14978 699 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGB1P19-201ENST00000517578 TTC31Q49AM3 519 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms