RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 ALDH1L1O75891 902 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 FAM153BP0C7A2 387 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 LMNB1P20700 586 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 ITPKAP23677 461 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 MSX1P28360 303 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 PMLP29590 882 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 GNALP38405 381 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 NFKB2Q00653 900 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 POU4F2Q12837 409 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 UBE4AQ14139 1066 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 FAM50AQ14320 339 aaKnown RBP3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 SPRED3Q2MJR0 410 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 TMEM67Q5HYA8 995 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 MRM1Q6IN84 353 aaKnown RBP3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 RUFY4Q6ZNE9 571 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 KRT25Q7Z3Z0 450 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 REC114Q7Z4M0 266 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 NIM1KQ8IY84 436 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 MEIOBQ8N635 442 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 ZSCAN1Q8NBB4 408 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 UBE2Q2Q8WVN8 375 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 RELTQ969Z4 430 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 ZNF669Q96BR6 464 aaPredicted RBP3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 INSM2Q96T92 566 aaPredicted RBP3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 OSMRQ99650 979 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 MIR1-1HGQ9H1L0 117 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 CAAP1Q9H8G2 361 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 BRD7Q9NPI1 651 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 GPN3Q9UHW5 284 aaPredicted RBP3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 GJA3Q9Y6H8 435 aa3.41□□□□□ -1.86
SCARNA3-201ENST00000517097 A0A1W2PQH9 124 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 METTL12A8MUP2 240 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 KIF4AO95239 1232 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 VSIG8P0DPA2 414 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 BMP6P22004 513 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 TARSP26639 723 aaKnown RBP3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 SOX5P35711 763 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 EPHB1P54762 984 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 FAAP100Q0VG06 881 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 PABPC4Q13310 644 aaKnown RBP eCLIP3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 TTF1Q15361 905 aaPredicted RBP3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 CT47A1Q5JQC4 288 aaPredicted RBP3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 WDR44Q5JSH3 913 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 PERM1Q5SV97 790 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 COL13A1Q5TAT6 717 aaPredicted RBP3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 RASIP1Q5U651 963 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 TSHZ1Q6ZSZ6 1077 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 APBB1IPQ7Z5R6 666 aaPredicted RBP3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 RNF180Q86T96 592 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 NLRP8Q86W28 1048 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 NCAPG2Q86XI2 1143 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 FAM178BQ8IXR5 827 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 LINC00528Q8N1L1 170 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 UBR7Q8N806 425 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 C19orf47Q8N9M1 422 aaKnown RBP3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 EVI5LQ96CN4 794 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 APBA2Q99767 749 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 PCGF6Q9BYE7 350 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 ZCCHC2Q9C0B9 1178 aaKnown RBP3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 EHMT1Q9H9B1 1298 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 POLMQ9NP87 494 aaPredicted RBP3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 MCM8Q9UJA3 840 aa3.4□□□□□ -1.87
SCARNA3-201ENST00000517097 A0A096LPE4 126 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 A0A1B0GTH6 734 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 A0A1W2PPZ6 126 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 UPK3BL1B0FP48 263 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 UPK3BL2E5RIL1 263 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 NFKBIEO00221 500 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 KHNYNO15037 678 aaKnown RBP3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 SPINT1O43278 529 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 PLIN1O60240 522 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 MAN1A2O60476 641 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 PDE8AO60658 829 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 CAND2O75155 1236 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 RFPL3O75679 317 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 BPNT1O95861 308 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 RARAP10276 462 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 BMP2P12643 396 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 CTSOP43234 321 aaPredicted RBP3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 ZNF157P51786 506 aaPredicted RBP3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 MCL1Q07820 350 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 CCINQ13939 588 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 CBX2Q14781 532 aaPredicted RBP3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 PPP2R5AQ15172 486 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 LRRC41Q15345 812 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 LONRF2Q1L5Z9 754 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 RPS26P11Q5JNZ5 115 aaPredicted RBP3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 AKAP4Q5JQC9 854 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 PRICKLE2Q7Z3G6 844 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 TTC6Q86TZ1 520 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 ZBTB38Q8NAP3 1195 aaPredicted RBP3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 HHIPQ96QV1 700 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 SLC26A8Q96RN1 970 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 TSEN34Q9BSV6 310 aaKnown RBP3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 SPATA9Q9BWV2 254 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 GSX2Q9BZM3 304 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 BHLHE41Q9C0J9 482 aaPredicted RBP3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 ZNF576Q9H609 170 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 TMEM39AQ9NV64 488 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 ZFATQ9P243 1243 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms