RNA–Protein interactions for RNA: ENST00000516316.1

RNU6-1299P-201, Transcript of RNA, U6 small nuclear 1299, pseudogene, humanhuman

BASIC

Gene RNU6-1299P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1299P-201ENST00000516316 CORO1BQ9BR76 489 aa3.33□□□□□ -1.88
RNU6-1299P-201ENST00000516316 C1orf115Q9H7X2 142 aa3.33□□□□□ -1.88
RNU6-1299P-201ENST00000516316 ABCB6Q9NP58 842 aa3.33□□□□□ -1.88
RNU6-1299P-201ENST00000516316 RAD18Q9NS91 495 aa3.33□□□□□ -1.88
RNU6-1299P-201ENST00000516316 EGFL7Q9UHF1 273 aa3.33□□□□□ -1.88
RNU6-1299P-201ENST00000516316 AP4E1Q9UPM8 1137 aa3.33□□□□□ -1.88
RNU6-1299P-201ENST00000516316 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1299P-201ENST00000516316 TMPRSS2O15393 492 aa3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 ARHGAP4P98171 946 aa3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 FAAP100Q0VG06 881 aa3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 BNIP3Q12983 259 aa3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 ORC1Q13415 861 aa3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 ZNF792Q3KQV3 632 aa3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 RPS26P11Q5JNZ5 115 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 PRPF40BQ6NWY9 871 aaKnown RBP3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 GLIS3Q8NEA6 775 aa3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 DDX54Q8TDD1 881 aaKnown RBP3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 FAM129BQ96TA1 746 aa3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 CCDC86Q9H6F5 360 aaKnown RBP3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 LGR6Q9HBX8 967 aa3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 CRIM1Q9NZV1 1036 aa3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 SLC5A6Q9Y289 635 aa3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 PCDHGC5Q9Y5F6 944 aa3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 U3KQE9 123 aa3.32□□□□□ -1.88
RNU6-1299P-201ENST00000516316 TMEM238LA0A1B0GVL6 79 aa3.31□□□□□ -1.88
RNU6-1299P-201ENST00000516316 ZNF862O60290 1169 aa3.31□□□□□ -1.88
RNU6-1299P-201ENST00000516316 CPNE3O75131 537 aaKnown RBP3.31□□□□□ -1.88
RNU6-1299P-201ENST00000516316 NEFLP07196 543 aa3.31□□□□□ -1.88
RNU6-1299P-201ENST00000516316 LIG1P18858 919 aa3.31□□□□□ -1.88
RNU6-1299P-201ENST00000516316 FUT4P22083 530 aa3.31□□□□□ -1.88
RNU6-1299P-201ENST00000516316 AP3B2Q13367 1082 aa3.31□□□□□ -1.88
RNU6-1299P-201ENST00000516316 CYP27C1Q4G0S4 372 aa3.31□□□□□ -1.88
RNU6-1299P-201ENST00000516316 STK11IPQ8N1F8 1099 aa3.31□□□□□ -1.88
RNU6-1299P-201ENST00000516316 FANCD2OSQ96PS1 177 aa3.31□□□□□ -1.88
RNU6-1299P-201ENST00000516316 EHD4Q9H223 541 aa3.31□□□□□ -1.88
RNU6-1299P-201ENST00000516316 NPHS2Q9NP85 383 aa3.31□□□□□ -1.88
RNU6-1299P-201ENST00000516316 DISC1Q9NRI5 854 aa3.31□□□□□ -1.88
RNU6-1299P-201ENST00000516316 BRPF3Q9ULD4 1205 aa3.31□□□□□ -1.88
RNU6-1299P-201ENST00000516316 DAGLAQ9Y4D2 1042 aa3.31□□□□□ -1.88
RNU6-1299P-201ENST00000516316 FAM87AP0C7U9 286 aa3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 CD8BP10966 210 aa3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 SERPINB4P48594 390 aa3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 CDK5R2Q13319 367 aa3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 PDE3AQ14432 1141 aa3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 PLCL1Q15111 1095 aa3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 KIF4BQ2VIQ3 1234 aa3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 PLD6Q8N2A8 252 aaKnown RBP3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 NETO1Q8TDF5 533 aa3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 CCDC74AQ96AQ1 378 aa3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 MISP3Q96FF7 219 aa3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 CITED4Q96RK1 184 aa3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 DNAJC25Q9H1X3 360 aa3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 KRT82Q9NSB4 513 aa3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 MBNL3Q9NUK0 354 aaKnown RBP3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 ADAMTS6Q9UKP5 1117 aa3.3□□□□□ -1.88
RNU6-1299P-201ENST00000516316 ARID1BQ8NFD5 2236 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 H3BRB1 525 aa3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 EIF1AYO14602 144 aaKnown RBP3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 GPR182O15218 404 aa3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 LEFTY1O75610 366 aa3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 RNASE1P07998 156 aaKnown RBP3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 SLFN14P0C7P3 912 aa3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 ID3Q02535 119 aa3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 PDE3BQ13370 1112 aa3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 GRM2Q14416 872 aa3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 ZNF648Q5T619 568 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 FAM214BQ7L5A3 538 aa3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 ATG4DQ86TL0 474 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 PDZD3Q86UT5 571 aa3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 SMYD4Q8IYR2 804 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 FAM181AQ8N9Y4 354 aa3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 ATXN3LQ9H3M9 355 aa3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 TUT1Q9H6E5 874 aaKnown RBP3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 MKNK2Q9HBH9 465 aa3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 VAV3Q9UKW4 847 aa3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 PLAGL2Q9UPG8 496 aa3.29□□□□□ -1.88
RNU6-1299P-201ENST00000516316 BIN1O00499 593 aa3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 NDUFB5O43674 189 aa3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 NEFMP07197 916 aa3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 GSTP1P09211 210 aaKnown RBP3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 CD96P40200 585 aa3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 ZNF157P51786 506 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 OXCT1P55809 520 aa3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 PRKCQQ04759 706 aa3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 TTLL4Q14679 1199 aa3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 TXNDC2Q86VQ3 553 aa3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 GLYCTKQ8IVS8 523 aa3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 STK35Q8TDR2 534 aa3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 EPS8L3Q8TE67 593 aaKnown RBP3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 DUSP23Q9BVJ7 150 aa3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 ZC3H12CQ9C0D7 883 aaKnown RBP3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 NIF3L1Q9GZT8 377 aa3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 CACNA2D2Q9NY47 1150 aa3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 USTQ9Y2C2 406 aa3.28□□□□□ -1.88
RNU6-1299P-201ENST00000516316 HCLS1P14317 486 aaPredicted RBP3.27□□□□□ -1.89
RNU6-1299P-201ENST00000516316 IFI16Q16666 785 aaKnown RBP3.27□□□□□ -1.89
RNU6-1299P-201ENST00000516316 ZC3H12AQ5D1E8 599 aaKnown RBP3.27□□□□□ -1.89
RNU6-1299P-201ENST00000516316 LRRN4CLQ8ND94 238 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms