RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 AKNAD1Q5T1N1 836 aa18.05■□□□□ 0.48
TRIM41-207ENST00000515223 WDR66Q8TBY9 1149 aa18.05■□□□□ 0.48
TRIM41-207ENST00000515223 SAMD9Q5K651 1589 aa18.05■□□□□ 0.48
TRIM41-207ENST00000515223 MCM7P33993 719 aa18.05■□□□□ 0.48
TRIM41-207ENST00000515223 NOP56O00567 594 aaKnown RBP18.05■□□□□ 0.48
TRIM41-207ENST00000515223 MBD4O95243 580 aa18.05■□□□□ 0.48
TRIM41-207ENST00000515223 TCIRG1Q13488 830 aa18.05■□□□□ 0.48
TRIM41-207ENST00000515223 FNBP1Q96RU3 617 aa18.05■□□□□ 0.48
TRIM41-207ENST00000515223 NEK11Q8NG66 645 aa18.05■□□□□ 0.48
TRIM41-207ENST00000515223 RIOK3O14730 519 aaKnown RBP18.04■□□□□ 0.48
TRIM41-207ENST00000515223 SMTNP53814 917 aa18.04■□□□□ 0.48
TRIM41-207ENST00000515223 CCDC65Q8IXS2 484 aa18.04■□□□□ 0.48
TRIM41-207ENST00000515223 GSPT1P15170 499 aaKnown RBP18.04■□□□□ 0.48
TRIM41-207ENST00000515223 PUM3Q15397 648 aaKnown RBP18.04■□□□□ 0.48
TRIM41-207ENST00000515223 DHX32Q7L7V1 743 aaKnown RBP18.04■□□□□ 0.48
TRIM41-207ENST00000515223 PLBD2Q8NHP8 589 aa18.04■□□□□ 0.48
TRIM41-207ENST00000515223 TXNDC16Q9P2K2 825 aa18.04■□□□□ 0.48
TRIM41-207ENST00000515223 SAP30BPQ9UHR5 308 aaKnown RBP18.04■□□□□ 0.48
TRIM41-207ENST00000515223 PDE8AO60658 829 aa18.04■□□□□ 0.48
TRIM41-207ENST00000515223 U2AF2P26368 475 aaKnown RBP eCLIP18.04■□□□□ 0.483e-7■■■■□ 19.3
TRIM41-207ENST00000515223 ARID5AQ03989 594 aa18.04■□□□□ 0.48
TRIM41-207ENST00000515223 SMAP1Q8IYB5 467 aaPredicted RBP18.04■□□□□ 0.48
TRIM41-207ENST00000515223 IQUBQ8NA54 791 aa18.04■□□□□ 0.48
TRIM41-207ENST00000515223 FAM89AQ96GI7 184 aa18.04■□□□□ 0.48
TRIM41-207ENST00000515223 ANTXR1Q9H6X2 564 aa18.04■□□□□ 0.48
TRIM41-207ENST00000515223 KRT83P78385 493 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 CCDC50Q8IVM0 306 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 RAD50Q92878 1312 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 YTHDC2Q9H6S0 1430 aaKnown RBP18.03■□□□□ 0.48
TRIM41-207ENST00000515223 CCDC14Q49A88 953 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 HSF2BPO75031 334 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 SLU7O95391 586 aaKnown RBP18.03■□□□□ 0.48
TRIM41-207ENST00000515223 NIM1KQ8IY84 436 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 FAM107BQ9H098 131 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 WDR44Q5JSH3 913 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 TIGD1Q96MW7 591 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 ITGA6P23229 1130 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 BIRC3Q13489 604 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 FCHSD1Q86WN1 690 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 CCDC42Q96M95 316 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 GPCPD1Q9NPB8 672 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 FRMD4BQ9Y2L6 1034 aa18.03■□□□□ 0.48
TRIM41-207ENST00000515223 BRAPQ7Z569 592 aa18.02■□□□□ 0.48
TRIM41-207ENST00000515223 TRMT2AQ8IZ69 625 aaKnown RBP18.02■□□□□ 0.48
TRIM41-207ENST00000515223 IFT74Q96LB3 600 aa18.02■□□□□ 0.48
TRIM41-207ENST00000515223 ATP6V0A2Q9Y487 856 aa18.02■□□□□ 0.48
TRIM41-207ENST00000515223 SNX16P57768 344 aa18.02■□□□□ 0.48
TRIM41-207ENST00000515223 KIF5AQ12840 1032 aa18.02■□□□□ 0.48
TRIM41-207ENST00000515223 FAM98CQ17RN3 349 aaKnown RBP18.02■□□□□ 0.48
TRIM41-207ENST00000515223 CREB3L3Q68CJ9 461 aa18.02■□□□□ 0.48
TRIM41-207ENST00000515223 FAM173BQ6P4H8 233 aa18.02■□□□□ 0.48
TRIM41-207ENST00000515223 PKD2L1Q9P0L9 805 aa18.02■□□□□ 0.48
TRIM41-207ENST00000515223 CD2BP2O95400 341 aaKnown RBP18.02■□□□□ 0.48
TRIM41-207ENST00000515223 EYA2O00167 538 aa18.02■□□□□ 0.47
TRIM41-207ENST00000515223 ZBED4O75132 1171 aa18.02■□□□□ 0.47
TRIM41-207ENST00000515223 MYRIPQ8NFW9 859 aa18.02■□□□□ 0.47
TRIM41-207ENST00000515223 ZMYM3Q14202 1370 aa18.02■□□□□ 0.47
TRIM41-207ENST00000515223 STX10O60499 249 aa18.01■□□□□ 0.47
TRIM41-207ENST00000515223 MAST1Q9Y2H9 1570 aa18.01■□□□□ 0.47
TRIM41-207ENST00000515223 APBA3O96018 575 aa18.01■□□□□ 0.47
TRIM41-207ENST00000515223 ZNF790Q6PG37 636 aa18.01■□□□□ 0.47
TRIM41-207ENST00000515223 BICC1Q9H694 974 aaKnown RBP18.01■□□□□ 0.47
TRIM41-207ENST00000515223 ADGBQ8N7X0 1667 aa18.01■□□□□ 0.47
TRIM41-207ENST00000515223 LPXNO60711 386 aa18.01■□□□□ 0.47
TRIM41-207ENST00000515223 HELLSQ9NRZ9 838 aa18.01■□□□□ 0.47
TRIM41-207ENST00000515223 USP21Q9UK80 565 aa18.01■□□□□ 0.47
TRIM41-207ENST00000515223 GAS8O95995 478 aa18.01■□□□□ 0.47
TRIM41-207ENST00000515223 HARSP12081 509 aaKnown RBP18.01■□□□□ 0.47
TRIM41-207ENST00000515223 TMEM110-MUSTN1A8MSY1 372 aa18.01■□□□□ 0.47
TRIM41-207ENST00000515223 RUFY3Q7L099 469 aa18.01■□□□□ 0.47
TRIM41-207ENST00000515223 CHST3Q7LGC8 479 aa18.01■□□□□ 0.47
TRIM41-207ENST00000515223 GPT2Q8TD30 523 aa18.01■□□□□ 0.47
TRIM41-207ENST00000515223 H7C1D1 291 aa18■□□□□ 0.47
TRIM41-207ENST00000515223 KRT86O43790 486 aa18■□□□□ 0.47
TRIM41-207ENST00000515223 ALDH1B1P30837 517 aa18■□□□□ 0.47
TRIM41-207ENST00000515223 PPP1R2P41236 205 aa18■□□□□ 0.47
TRIM41-207ENST00000515223 APOBRQ0VD83 1088 aa18■□□□□ 0.47
TRIM41-207ENST00000515223 LETM2Q2VYF4 491 aa18■□□□□ 0.47
TRIM41-207ENST00000515223 SV2BQ7L1I2 683 aa18■□□□□ 0.47
TRIM41-207ENST00000515223 FAM169AQ9Y6X4 670 aa18■□□□□ 0.47
TRIM41-207ENST00000515223 RTL1A6NKG5 1358 aa18■□□□□ 0.47
TRIM41-207ENST00000515223 HAUS3Q68CZ6 603 aa18■□□□□ 0.47
TRIM41-207ENST00000515223 GOLGA1Q92805 767 aa18■□□□□ 0.47
TRIM41-207ENST00000515223 TRIM6Q9C030 488 aaPredicted RBP18■□□□□ 0.47
TRIM41-207ENST00000515223 FBF1Q8TES7 1133 aa18■□□□□ 0.47
TRIM41-207ENST00000515223 PPP1R9BQ96SB3 815 aa18■□□□□ 0.47
TRIM41-207ENST00000515223 MAP3K19Q56UN5 1328 aa18■□□□□ 0.47
TRIM41-207ENST00000515223 STMN4Q9H169 189 aaPredicted RBP18■□□□□ 0.47
TRIM41-207ENST00000515223 CTAGE15A4D2H0 777 aa17.99■□□□□ 0.47
TRIM41-207ENST00000515223 CTAGE8P0CG41 777 aa17.99■□□□□ 0.47
TRIM41-207ENST00000515223 CTAGE6Q86UF2 777 aa17.99■□□□□ 0.47
TRIM41-207ENST00000515223 CTAGE4Q8IX94 777 aa17.99■□□□□ 0.47
TRIM41-207ENST00000515223 DDX23Q9BUQ8 820 aaKnown RBP17.99■□□□□ 0.47
TRIM41-207ENST00000515223 ATP2A2P16615 1042 aaKnown RBP17.99■□□□□ 0.47
TRIM41-207ENST00000515223 SYT10Q6XYQ8 523 aa17.99■□□□□ 0.47
TRIM41-207ENST00000515223 CCDC63Q8NA47 563 aa17.99■□□□□ 0.47
TRIM41-207ENST00000515223 GINS2Q9Y248 185 aa17.99■□□□□ 0.47
TRIM41-207ENST00000515223 DISP1Q96F81 1524 aa17.99■□□□□ 0.47
TRIM41-207ENST00000515223 ZNF521Q96K83 1311 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms