RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 H7C1W4 665 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 RBBP5Q15291 538 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 TTLL7Q6ZT98 887 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 PPM1EQ8WY54 764 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 SPATS2LQ9NUQ6 558 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 WDR33Q9C0J8 1336 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 RFX7Q2KHR2 1363 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 A0A087WZG4 1122 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 IPO5O00410 1097 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 SLC27A2O14975 620 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 GADD45BO75293 160 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 CHGBP05060 677 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 ATP5JP18859 108 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 RPS6KA3P51812 740 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 PDCD2Q16342 344 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 TMEM87AQ8NBN3 555 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 CRACR2AQ9BSW2 395 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 BLOC1S6Q9UL45 172 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 ERVV-2B6SEH9 535 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 HIP1O00291 1037 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 SYT1P21579 422 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 MNAT1P51948 309 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 GORABQ5T7V8 394 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 HHATQ5VTY9 493 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 CCDC186Q7Z3E2 898 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 CCDC125Q86Z20 511 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 OGFOD1Q8N543 542 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 FSD1Q9BTV5 496 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 G3BP2Q9UN86 482 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 NDUFB9Q9Y6M9 179 aa8.6□□□□□ -1.03
PDLIM5-219ENST00000514743 TBC1D8BQ0IIM8 1120 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 RASA3Q14644 834 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 ME3Q16798 604 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 TBC1D25Q3MII6 688 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 LRSAM1Q6UWE0 723 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 ATG9AQ7Z3C6 839 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 HELBQ8NG08 1087 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 DDX54Q8TDD1 881 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 PRDM11Q9NQV5 511 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 PDRG1Q9NUG6 133 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 NUP98P52948 1817 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 COL16A1Q07092 1604 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 SEMA3EO15041 775 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 MBD3O95983 291 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 ZSCAN22P10073 491 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 TOM1L2Q6ZVM7 507 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 TAX1BP1Q86VP1 789 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 MRFAP1L1Q96HT8 127 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 DBNDD2Q9BQY9 259 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 YIPF2Q9BWQ6 316 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 TPCN1Q9ULQ1 816 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 LRP6O75581 1613 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 TAF5LO75529 589 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 CDKL5O76039 1030 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 A1BGP04217 495 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 GPS2Q13227 327 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 SYCP1Q15431 976 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 USPL1Q5W0Q7 1092 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 USP48Q86UV5 1035 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 CCDC83Q8IWF9 413 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 C17orf53Q8N3J3 647 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 TRIM6Q9C030 488 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 IQSEC3Q9UPP2 1182 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 CYP46A1Q9Y6A2 500 aa8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 ZNF335Q9H4Z2 1342 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-219ENST00000514743 MYO5AQ9Y4I1 1855 aaKnown RBP8.59□□□□□ -1.04
PDLIM5-219ENST00000514743 STX6O43752 255 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 PEX14O75381 377 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 LMBR1LQ6UX01 489 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 SLAIN2Q9P270 581 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 TBC1D2BQ9UPU7 963 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 PPME1Q9Y570 386 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 AKAP11Q9UKA4 1901 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 COL14A1Q05707 1796 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 IL2RBP14784 551 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 NCAPG2Q86XI2 1143 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 TEX11Q8IYF3 940 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 TMEM165Q9HC07 324 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 SYNPO2Q9UMS6 1093 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 CTDP1Q9Y5B0 961 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 F13A1P00488 732 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 NAT2P11245 290 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 GJB2P29033 226 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 MECOMQ03112 1051 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 MKRN3Q13064 507 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 TOB2Q14106 344 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 AKNAD1Q5T1N1 836 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 ZNF397Q8NF99 534 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 HAUS7Q99871 368 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 IQCGQ9H095 443 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 ALDH8A1Q9H2A2 487 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 MTMR6Q9Y217 621 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 CNPY2Q9Y2B0 182 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 PALLDQ8WX93 1383 aa8.58□□□□□ -1.04
PDLIM5-219ENST00000514743 DOT1LQ8TEK3 1739 aa8.57□□□□□ -1.04
PDLIM5-219ENST00000514743 COL22A1Q8NFW1 1626 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-219ENST00000514743 ZRANB2O95218 330 aaKnown RBP eCLIP8.57□□□□□ -1.04
PDLIM5-219ENST00000514743 RDXP35241 583 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-219ENST00000514743 CDC37Q16543 378 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms