RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 ACTN2P35609 894 aa8.49□□□□□ -1.05
CCDC30-214ENST00000514642 EIF4A1P60842 406 aaKnown RBP8.49□□□□□ -1.05
CCDC30-214ENST00000514642 VPS72Q15906 364 aa8.49□□□□□ -1.05
CCDC30-214ENST00000514642 ZNF594Q96JF6 807 aaPredicted RBP8.49□□□□□ -1.05
CCDC30-214ENST00000514642 NACA2Q9H009 215 aa8.49□□□□□ -1.05
CCDC30-214ENST00000514642 PTPRTO14522 1441 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 USO1O60763 962 aaKnown RBP8.48□□□□□ -1.05
CCDC30-214ENST00000514642 CFAP100Q494V2 611 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 HAUS3Q68CZ6 603 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 Q6ZUG5 572 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 RGS22Q8NE09 1264 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 ZSCAN16Q9H4T2 348 aaPredicted RBP8.48□□□□□ -1.05
CCDC30-214ENST00000514642 RBM8AQ9Y5S9 174 aaKnown RBP8.48□□□□□ -1.05
CCDC30-214ENST00000514642 ADCY7P51828 1080 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 USH1GQ495M9 461 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 HS2ST1Q7LGA3 356 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 FAM200AQ8TCP9 573 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 MAP7D2Q96T17 732 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 SBNO2Q9Y2G9 1366 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 OTUD6AQ7L8S5 288 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 CCDC91Q7Z6B0 441 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 MRVI1Q9Y6F6 885 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 SYNMO15061 1565 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 ROBO2Q9HCK4 1378 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 SEMA3EO15041 775 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 RPS6KA4O75676 772 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 BTDP43251 543 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 HAUS2Q9NVX0 235 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 SWAP70Q9UH65 585 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 TRPC6Q9Y210 931 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 FAM160B1Q5W0V3 765 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 APOBEC3FQ8IUX4 373 aaKnown RBP8.48□□□□□ -1.05
CCDC30-214ENST00000514642 PHACTR3Q96KR7 559 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 FNBP1Q96RU3 617 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 ASAP1Q9ULH1 1129 aa8.48□□□□□ -1.05
CCDC30-214ENST00000514642 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.48□□□□□ -1.05
CCDC30-214ENST00000514642 SMC1AQ14683 1233 aaKnown RBP8.47□□□□□ -1.05
CCDC30-214ENST00000514642 IFI16Q16666 785 aaKnown RBP8.47□□□□□ -1.05
CCDC30-214ENST00000514642 FERMT3Q86UX7 667 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 FSIP1Q8NA03 581 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 RNF214Q8ND24 703 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 NUP88Q99567 741 aaPredicted RBP8.47□□□□□ -1.05
CCDC30-214ENST00000514642 RNF216Q9NWF9 866 aaPredicted RBP8.47□□□□□ -1.05
CCDC30-214ENST00000514642 GINS2Q9Y248 185 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 CNPY2Q9Y2B0 182 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 CD2APQ9Y5K6 639 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 ATP10DQ9P241 1426 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 KDRP35968 1356 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 KIF24Q5T7B8 1368 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 IBTKQ9P2D0 1353 aaPredicted RBP8.47□□□□□ -1.05
CCDC30-214ENST00000514642 CHMP2AO43633 222 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 FBXO41Q8TF61 875 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 BRF1Q92994 677 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 CIZ1Q9ULV3 898 aaPredicted RBP8.47□□□□□ -1.05
CCDC30-214ENST00000514642 CCDC169A6NNP5 214 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 CHRNDQ07001 517 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 WDR44Q5JSH3 913 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 RRAGBQ5VZM2 374 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 CHST3Q7LGC8 479 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 GLG1Q92896 1179 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 COA7Q96BR5 231 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 SDSP20132 328 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 NASPP49321 788 aaPredicted RBP8.47□□□□□ -1.05
CCDC30-214ENST00000514642 ASIC1P78348 528 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 MKRN3Q13064 507 aaKnown RBP8.47□□□□□ -1.05
CCDC30-214ENST00000514642 TRIM47Q96LD4 638 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 CLRN2A0PK11 232 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 C21orf2O43822 256 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 FLOT1O75955 427 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 TRPC3Q13507 836 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 ABCB5Q2M3G0 1257 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 ARID3AQ99856 593 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 DBNDD1Q9H9R9 158 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 USP6P35125 1406 aa8.47□□□□□ -1.05
CCDC30-214ENST00000514642 RIMS1Q86UR5 1692 aaKnown RBP8.47□□□□□ -1.05
CCDC30-214ENST00000514642 RAD17O75943 681 aa8.46□□□□□ -1.05
CCDC30-214ENST00000514642 TSHZ3Q63HK5 1081 aa8.46□□□□□ -1.05
CCDC30-214ENST00000514642 CCDC102BQ68D86 513 aa8.46□□□□□ -1.05
CCDC30-214ENST00000514642 APPBP2Q92624 585 aa8.46□□□□□ -1.05
CCDC30-214ENST00000514642 TMEM87BQ96K49 555 aa8.46□□□□□ -1.05
CCDC30-214ENST00000514642 MACROD2A1Z1Q3 448 aa8.46□□□□□ -1.05
CCDC30-214ENST00000514642 ERVV-1B6SEH8 477 aa8.46□□□□□ -1.05
CCDC30-214ENST00000514642 RETREG2Q8NC44 543 aa8.46□□□□□ -1.05
CCDC30-214ENST00000514642 CLIP2Q9UDT6 1046 aa8.46□□□□□ -1.05
CCDC30-214ENST00000514642 ARHGEF35A5YM69 484 aa8.46□□□□□ -1.06
CCDC30-214ENST00000514642 TRIM75PA6NK02 468 aa8.46□□□□□ -1.06
CCDC30-214ENST00000514642 CCDC65Q8IXS2 484 aa8.46□□□□□ -1.06
CCDC30-214ENST00000514642 RNF34Q969K3 372 aa8.46□□□□□ -1.06
CCDC30-214ENST00000514642 MYOM2P54296 1465 aa8.46□□□□□ -1.06
CCDC30-214ENST00000514642 TET3O43151 1660 aa8.46□□□□□ -1.06
CCDC30-214ENST00000514642 CLTCQ00610 1675 aaKnown RBP8.46□□□□□ -1.06
CCDC30-214ENST00000514642 ALAS1P13196 640 aa8.46□□□□□ -1.06
CCDC30-214ENST00000514642 GRAPQ13588 217 aa8.46□□□□□ -1.06
CCDC30-214ENST00000514642 DTHD1Q6ZMT9 781 aa8.46□□□□□ -1.06
CCDC30-214ENST00000514642 GRAPLQ8TC17 118 aaPredicted RBP8.46□□□□□ -1.06
CCDC30-214ENST00000514642 ERCC6L2Q5T890 1561 aa8.46□□□□□ -1.06
CCDC30-214ENST00000514642 DDX39AO00148 427 aaKnown RBP8.46□□□□□ -1.06
CCDC30-214ENST00000514642 VAMP4O75379 141 aa8.46□□□□□ -1.06
CCDC30-214ENST00000514642 CCT6AP40227 531 aaKnown RBP8.46□□□□□ -1.06
CCDC30-214ENST00000514642 PDE1AP54750 535 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms