RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	ATP7B	P35670	1465 aa		9.1	□□□□□ -0.95
HIPK1-210	ENST00000514621	SPDYE3	A6NKU9	549 aa		9.1	□□□□□ -0.95
HIPK1-210	ENST00000514621	C1QTNF9B	B2RNN3	333 aa		9.1	□□□□□ -0.95
HIPK1-210	ENST00000514621	NID1	P14543	1247 aa		9.1	□□□□□ -0.95
HIPK1-210	ENST00000514621	XPC	Q01831	940 aa	Predicted RBP	9.1	□□□□□ -0.95
HIPK1-210	ENST00000514621	FNDC3A	Q9Y2H6	1198 aa	Known RBP	9.1	□□□□□ -0.95
HIPK1-210	ENST00000514621	RGPD8	O14715	1765 aa	Predicted RBP	9.09	□□□□□ -0.95
HIPK1-210	ENST00000514621	NPHP3	Q7Z494	1330 aa		9.09	□□□□□ -0.95
HIPK1-210	ENST00000514621	PHLPP1	O60346	1717 aa		9.09	□□□□□ -0.95
HIPK1-210	ENST00000514621	CARNS1	A5YM72	827 aa		9.09	□□□□□ -0.95
HIPK1-210	ENST00000514621	ZBTB39	O15060	712 aa		9.09	□□□□□ -0.95
HIPK1-210	ENST00000514621	LILRB5	O75023	590 aa		9.09	□□□□□ -0.95
HIPK1-210	ENST00000514621	SPATA31C1	P0DKV0	1188 aa		9.09	□□□□□ -0.95
HIPK1-210	ENST00000514621	SCNN1A	P37088	669 aa		9.09	□□□□□ -0.95
HIPK1-210	ENST00000514621	NGDN	Q8NEJ9	315 aa	Known RBP	9.09	□□□□□ -0.95
HIPK1-210	ENST00000514621	TRPM4	Q8TD43	1214 aa		9.09	□□□□□ -0.95
HIPK1-210	ENST00000514621	GTF3C2	Q8WUA4	911 aa	Predicted RBP	9.09	□□□□□ -0.95
HIPK1-210	ENST00000514621	COL16A1	Q07092	1604 aa	Predicted RBP	9.09	□□□□□ -0.95
HIPK1-210	ENST00000514621	NHSL1	Q5SYE7	1610 aa		9.09	□□□□□ -0.95
HIPK1-210	ENST00000514621	HSPA5	P11021	654 aa	Known RBP	9.08	□□□□□ -0.96
HIPK1-210	ENST00000514621	GPLD1	P80108	840 aa		9.08	□□□□□ -0.96
HIPK1-210	ENST00000514621	PDE4C	Q08493	712 aa		9.08	□□□□□ -0.96
HIPK1-210	ENST00000514621	KRT28	Q7Z3Y7	464 aa		9.08	□□□□□ -0.96
HIPK1-210	ENST00000514621	FAM35A	Q86V20	835 aa		9.08	□□□□□ -0.96
HIPK1-210	ENST00000514621	NLRP13	Q86W25	1043 aa		9.08	□□□□□ -0.96
HIPK1-210	ENST00000514621	GPR152	Q8TDT2	470 aa		9.08	□□□□□ -0.96
HIPK1-210	ENST00000514621	LRRC59	Q96AG4	307 aa	Known RBP	9.08	□□□□□ -0.96
HIPK1-210	ENST00000514621	TLR7	Q9NYK1	1049 aa	Known RBP	9.08	□□□□□ -0.96
HIPK1-210	ENST00000514621	PXDN	Q92626	1479 aa		9.08	□□□□□ -0.96
HIPK1-210	ENST00000514621	ACE	P12821	1306 aa		9.07	□□□□□ -0.96
HIPK1-210	ENST00000514621	KIF1A	Q12756	1690 aa		9.07	□□□□□ -0.96
HIPK1-210	ENST00000514621	PPIP5K1	Q6PFW1	1433 aa		9.07	□□□□□ -0.96
HIPK1-210	ENST00000514621	PSAP	P07602	524 aa		9.07	□□□□□ -0.96
HIPK1-210	ENST00000514621	NRL	P54845	237 aa		9.07	□□□□□ -0.96
HIPK1-210	ENST00000514621	TMF1	P82094	1093 aa		9.07	□□□□□ -0.96
HIPK1-210	ENST00000514621	TRIP4	Q15650	581 aa	Predicted RBP	9.07	□□□□□ -0.96
HIPK1-210	ENST00000514621	PHLDB3	Q6NSJ2	640 aa		9.07	□□□□□ -0.96
HIPK1-210	ENST00000514621	PSAPL1	Q6NUJ1	521 aa		9.07	□□□□□ -0.96
HIPK1-210	ENST00000514621	PUS7	Q96PZ0	661 aa	Known RBP	9.07	□□□□□ -0.96
HIPK1-210	ENST00000514621	JPH1	Q9HDC5	661 aa	Predicted RBP	9.07	□□□□□ -0.96
HIPK1-210	ENST00000514621	POLR3A	O14802	1390 aa	Predicted RBP	9.07	□□□□□ -0.96
HIPK1-210	ENST00000514621	JCAD	Q9P266	1359 aa		9.07	□□□□□ -0.96
HIPK1-210	ENST00000514621	DISP3	Q9P2K9	1392 aa		9.07	□□□□□ -0.96
HIPK1-210	ENST00000514621	FAM229A	H3BQW9	127 aa		9.06	□□□□□ -0.96
HIPK1-210	ENST00000514621	RGS9	O75916	674 aa	Predicted RBP	9.06	□□□□□ -0.96
HIPK1-210	ENST00000514621	CPB1	P15086	417 aa		9.06	□□□□□ -0.96
HIPK1-210	ENST00000514621	BAG6	P46379	1132 aa		9.06	□□□□□ -0.96
HIPK1-210	ENST00000514621	PLAUR	Q03405	335 aa		9.06	□□□□□ -0.96
HIPK1-210	ENST00000514621	NOM1	Q5C9Z4	860 aa	Known RBP	9.06	□□□□□ -0.96
HIPK1-210	ENST00000514621	PRRT3	Q5FWE3	981 aa		9.06	□□□□□ -0.96
HIPK1-210	ENST00000514621	NUDT8	Q8WV74	236 aa		9.06	□□□□□ -0.96
HIPK1-210	ENST00000514621	TOPAZ1	Q8N9V7	1692 aa		9.06	□□□□□ -0.96
HIPK1-210	ENST00000514621	SBNO1	A3KN83	1393 aa		9.05	□□□□□ -0.96
HIPK1-210	ENST00000514621	ZBTB42	B2RXF5	422 aa		9.05	□□□□□ -0.96
HIPK1-210	ENST00000514621	MMP20	O60882	483 aa		9.05	□□□□□ -0.96
HIPK1-210	ENST00000514621	RPLP1	P05386	114 aa	Known RBP	9.05	□□□□□ -0.96
HIPK1-210	ENST00000514621	SOX18	P35713	384 aa		9.05	□□□□□ -0.96
HIPK1-210	ENST00000514621	MLLT1	Q03111	559 aa	Predicted RBP	9.05	□□□□□ -0.96
HIPK1-210	ENST00000514621	FRRS1L	Q9P0K9	344 aa		9.05	□□□□□ -0.96
HIPK1-210	ENST00000514621	SPATA31A3	Q5VYP0	1347 aa		9.05	□□□□□ -0.96
HIPK1-210	ENST00000514621	PNPLA6	Q8IY17	1366 aa		9.04	□□□□□ -0.96
HIPK1-210	ENST00000514621	LOC100996750	A0A140TA64	210 aa		9.04	□□□□□ -0.96
HIPK1-210	ENST00000514621	PCSK2	P16519	638 aa		9.04	□□□□□ -0.96
HIPK1-210	ENST00000514621	ALKBH2	Q6NS38	261 aa		9.04	□□□□□ -0.96
HIPK1-210	ENST00000514621	ELMSAN1	Q6PJG2	1045 aa		9.04	□□□□□ -0.96
HIPK1-210	ENST00000514621	TMC1	Q8TDI8	760 aa		9.04	□□□□□ -0.96
HIPK1-210	ENST00000514621	KRTAP4-6	Q9BYQ5	205 aa		9.04	□□□□□ -0.96
HIPK1-210	ENST00000514621	SLC12A5	Q9H2X9	1139 aa		9.04	□□□□□ -0.96
HIPK1-210	ENST00000514621	ITSN1	Q15811	1721 aa		9.04	□□□□□ -0.96
HIPK1-210	ENST00000514621	HOXD8	P13378	290 aa	Predicted RBP	9.03	□□□□□ -0.96
HIPK1-210	ENST00000514621	MPST	P25325	297 aa		9.03	□□□□□ -0.96
HIPK1-210	ENST00000514621	AFF1	P51825	1210 aa	Known RBP	9.03	□□□□□ -0.96
HIPK1-210	ENST00000514621	SF3B2	Q13435	895 aa	Known RBP	9.03	□□□□□ -0.96
HIPK1-210	ENST00000514621	PERM1	Q5SV97	790 aa		9.03	□□□□□ -0.96
HIPK1-210	ENST00000514621	TTC39B	Q5VTQ0	682 aa	Predicted RBP	9.03	□□□□□ -0.96
HIPK1-210	ENST00000514621	ATCAY	Q86WG3	371 aa		9.03	□□□□□ -0.96
HIPK1-210	ENST00000514621	RETREG2	Q8NC44	543 aa		9.03	□□□□□ -0.96
HIPK1-210	ENST00000514621	TNS3	Q68CZ2	1445 aa		9.03	□□□□□ -0.96
HIPK1-210	ENST00000514621	SPATA31A6	Q5VVP1	1343 aa		9.03	□□□□□ -0.96
HIPK1-210	ENST00000514621	SHPRH	Q149N8	1683 aa		9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	LOC102724428	A0A0B4J2F2	783 aa		9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	ADAM23	O75077	832 aa		9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	FAM13A	O94988	1023 aa		9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	EIF1AX	P47813	144 aa	Known RBP	9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	SIK1	P57059	783 aa		9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	TRIM28	Q13263	835 aa	Known RBP	9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	TRAPPC3L	Q5T215	181 aa		9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	PDE12	Q6L8Q7	609 aa	Known RBP	9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	HFE2	Q6ZVN8	426 aa		9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	TTC16	Q8NEE8	873 aa		9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	EDEM1	Q92611	657 aa		9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	TTC9	Q92623	222 aa		9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	LPIN3	Q9BQK8	851 aa		9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	RBSN	Q9H1K0	784 aa		9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	CPSF1	Q10570	1443 aa	Known RBP	9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	CD163L1	Q9NR16	1453 aa		9.02	□□□□□ -0.97
HIPK1-210	ENST00000514621	ABL1	P00519	1130 aa		9.01	□□□□□ -0.97
HIPK1-210	ENST00000514621	GHRH	P01286	108 aa		9.01	□□□□□ -0.97
HIPK1-210	ENST00000514621	NPR3	P17342	541 aa		9.01	□□□□□ -0.97
HIPK1-210	ENST00000514621	EIF2AK2	P19525	551 aa	Known RBP	9.01	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms