RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 LY9Q9HBG7 655 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 NARFQ9UHQ1 456 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 MINPP1Q9UNW1 487 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 ZKSCAN5Q9Y2L8 839 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 TIAM2Q8IVF5 1701 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 C4AP0C0L4 1744 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 C4BP0C0L5 1744 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 GNPATO15228 680 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 PTMAP06454 111 aaKnown RBP9.57□□□□□ -0.88
CPNE4-211ENST00000514439 CDC27P30260 824 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 TDO2P48775 406 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 TMEM67Q5HYA8 995 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 SLC10A5Q5PT55 438 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 AKNAD1Q5T1N1 836 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 FAM200AQ8TCP9 573 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 NACAP1Q9BZK3 213 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 GOLPH3LQ9H4A5 285 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 GJB4Q9NTQ9 266 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 GNL3LQ9NVN8 582 aaKnown RBP9.57□□□□□ -0.88
CPNE4-211ENST00000514439 A0A1B0GUL6 1792 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 CYP7A1P22680 504 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 FAM182BQ5T319 152 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 NFXL1Q6ZNB6 911 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 ADGRA1Q86SQ6 560 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 SGMS1Q86VZ5 419 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 CCAR1Q8IX12 1150 aaKnown RBP9.56□□□□□ -0.88
CPNE4-211ENST00000514439 CNNM2Q9H8M5 875 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 RTEL1Q9NZ71 1219 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 ZSWIM5Q9P217 1185 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 ABCF2Q9UG63 623 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 USP21Q9UK80 565 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 THSD7AQ9UPZ6 1657 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 BTAF1O14981 1849 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 GOLGA8AA7E2F4 631 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 KIF28PB7ZC32 967 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 IFIT3O14879 490 aaKnown RBP9.56□□□□□ -0.88
CPNE4-211ENST00000514439 ZBTB43O43298 467 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 CDKL5O76039 1030 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 POLR3DP05423 398 aaPredicted RBP9.56□□□□□ -0.88
CPNE4-211ENST00000514439 LIFRP42702 1097 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 ME1P48163 572 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 MFSD6Q6ZSS7 791 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 BRAPQ7Z569 592 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 NBPF5PQ86XG9 351 aaPredicted RBP9.56□□□□□ -0.88
CPNE4-211ENST00000514439 CCDC144CPQ8IYA2 1237 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 STAG1Q8WVM7 1258 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 SETDB2Q96T68 719 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 MYL10Q9BUA6 226 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 KRT23Q9C075 422 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 NYXQ9GZU5 481 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 RAI14Q9P0K7 980 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 CCNL1Q9UK58 526 aaPredicted RBP9.56□□□□□ -0.88
CPNE4-211ENST00000514439 TAF1P21675 1872 aa9.56□□□□□ -0.88
CPNE4-211ENST00000514439 AP5Z1O43299 807 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 ZNF500O60304 480 aaPredicted RBP9.55□□□□□ -0.88
CPNE4-211ENST00000514439 ZPR1O75312 459 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 PLCB2Q00722 1185 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 KIF23Q02241 960 aaPredicted RBP9.55□□□□□ -0.88
CPNE4-211ENST00000514439 ANO6Q4KMQ2 910 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 CAVIN4Q5BKX8 364 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 MYSM1Q5VVJ2 828 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 CPLX2Q6PUV4 134 aaKnown RBP9.55□□□□□ -0.88
CPNE4-211ENST00000514439 CCDC73Q6ZRK6 1079 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 AMIGO3Q86WK7 504 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 VPS37DQ86XT2 251 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 PHKBQ93100 1093 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 FAM84BQ96KN1 310 aaPredicted RBP9.55□□□□□ -0.88
CPNE4-211ENST00000514439 AIFM3Q96NN9 605 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 ALG1Q9BT22 464 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 CASZ1Q86V15 1759 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 NHSQ6T4R5 1651 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 SNW1Q13573 536 aaKnown RBP9.55□□□□□ -0.88
CPNE4-211ENST00000514439 NTRK3Q16288 839 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 RRP12Q5JTH9 1297 aaKnown RBP9.55□□□□□ -0.88
CPNE4-211ENST00000514439 LUZP1Q86V48 1076 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 CCDC24Q8N4L8 307 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 LINC00301Q8NCQ3 95 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 SDR42E1Q8WUS8 393 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 NLRP3Q96P20 1036 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 TOMM22Q9NS69 142 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 FAM217BQ9NTX9 383 aaPredicted RBP9.55□□□□□ -0.88
CPNE4-211ENST00000514439 POLR3EQ9NVU0 708 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 PCDHA7Q9UN72 937 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 RTCBQ9Y3I0 505 aaKnown RBP9.55□□□□□ -0.88
CPNE4-211ENST00000514439 SLC12A7Q9Y666 1083 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 CLIC4Q9Y696 253 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 COL24A1Q17RW2 1714 aa9.55□□□□□ -0.88
CPNE4-211ENST00000514439 MAGEB6P1A0A0J9YX57 407 aa9.54□□□□□ -0.88
CPNE4-211ENST00000514439 CCDC69A6NI79 296 aa9.54□□□□□ -0.88
CPNE4-211ENST00000514439 RANBP6O60518 1105 aaKnown RBP9.54□□□□□ -0.88
CPNE4-211ENST00000514439 KLRK1P26718 216 aa9.54□□□□□ -0.88
CPNE4-211ENST00000514439 RPS8P62241 208 aaKnown RBP9.54□□□□□ -0.88
CPNE4-211ENST00000514439 FAM160A1Q05DH4 1040 aa9.54□□□□□ -0.88
CPNE4-211ENST00000514439 PPARAQ07869 468 aa9.54□□□□□ -0.88
CPNE4-211ENST00000514439 STK38Q15208 465 aa9.54□□□□□ -0.88
CPNE4-211ENST00000514439 SASS6Q6UVJ0 657 aa9.54□□□□□ -0.88
CPNE4-211ENST00000514439 STK11IPQ8N1F8 1099 aa9.54□□□□□ -0.88
CPNE4-211ENST00000514439 FSIP1Q8NA03 581 aa9.54□□□□□ -0.88
CPNE4-211ENST00000514439 RGS22Q8NE09 1264 aa9.54□□□□□ -0.88
CPNE4-211ENST00000514439 ENGASEQ8NFI3 743 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms