RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	SLFN14	P0C7P3	912 aa		7.6	□□□□□ -1.19
MATR3-223	ENST00000514402	DRD2	P14416	443 aa		7.6	□□□□□ -1.19
MATR3-223	ENST00000514402	ARNT	P27540	789 aa		7.6	□□□□□ -1.19
MATR3-223	ENST00000514402	ZNF157	P51786	506 aa	Predicted RBP	7.6	□□□□□ -1.19
MATR3-223	ENST00000514402	KIF4B	Q2VIQ3	1234 aa		7.6	□□□□□ -1.19
MATR3-223	ENST00000514402	AKAP4	Q5JQC9	854 aa		7.6	□□□□□ -1.19
MATR3-223	ENST00000514402	ARTN	Q5T4W7	220 aa		7.6	□□□□□ -1.19
MATR3-223	ENST00000514402	PAOX	Q6QHF9	649 aa		7.6	□□□□□ -1.19
MATR3-223	ENST00000514402	NPAS4	Q8IUM7	802 aa		7.6	□□□□□ -1.19
MATR3-223	ENST00000514402	SULF2	Q8IWU5	870 aa		7.6	□□□□□ -1.19
MATR3-223	ENST00000514402	GIMAP7	Q8NHV1	300 aa		7.6	□□□□□ -1.19
MATR3-223	ENST00000514402	FAM95C	A0A1B0GW59	222 aa		7.59	□□□□□ -1.19
MATR3-223	ENST00000514402	EIF4B	P23588	611 aa	Known RBP	7.59	□□□□□ -1.19
MATR3-223	ENST00000514402	RXRB	P28702	533 aa		7.59	□□□□□ -1.19
MATR3-223	ENST00000514402	MAP7	Q14244	749 aa		7.59	□□□□□ -1.19
MATR3-223	ENST00000514402	CCDC27	Q2M243	656 aa		7.59	□□□□□ -1.19
MATR3-223	ENST00000514402	CCDC86	Q9H6F5	360 aa	Known RBP	7.59	□□□□□ -1.19
MATR3-223	ENST00000514402	ACTL7B	Q9Y614	415 aa		7.59	□□□□□ -1.19
MATR3-223	ENST00000514402	AK5	Q9Y6K8	562 aa		7.59	□□□□□ -1.19
MATR3-223	ENST00000514402	SCO2	A0A1W2PP80	73 aa		7.58	□□□□□ -1.2
MATR3-223	ENST00000514402	USP17L7	P0C7H9	530 aa		7.58	□□□□□ -1.2
MATR3-223	ENST00000514402	CDPF1	Q6NVV7	123 aa		7.58	□□□□□ -1.2
MATR3-223	ENST00000514402	ZDHHC13	Q8IUH4	622 aa		7.58	□□□□□ -1.2
MATR3-223	ENST00000514402	ATXN3L	Q9H3M9	355 aa		7.58	□□□□□ -1.2
MATR3-223	ENST00000514402	ACSS3	Q9H6R3	686 aa		7.58	□□□□□ -1.2
MATR3-223	ENST00000514402	CACNA2D2	Q9NY47	1150 aa		7.58	□□□□□ -1.2
MATR3-223	ENST00000514402	AP4E1	Q9UPM8	1137 aa		7.58	□□□□□ -1.2
MATR3-223	ENST00000514402	ENC1	O14682	589 aa		7.57	□□□□□ -1.2
MATR3-223	ENST00000514402	TMPRSS2	O15393	492 aa		7.57	□□□□□ -1.2
MATR3-223	ENST00000514402	ZNF862	O60290	1169 aa		7.57	□□□□□ -1.2
MATR3-223	ENST00000514402	ITGAE	P38570	1179 aa		7.57	□□□□□ -1.2
MATR3-223	ENST00000514402	ID3	Q02535	119 aa		7.57	□□□□□ -1.2
MATR3-223	ENST00000514402	ZNF252P-AS1	Q0IIN9	211 aa		7.57	□□□□□ -1.2
MATR3-223	ENST00000514402	LRRC14	Q15048	493 aa		7.57	□□□□□ -1.2
MATR3-223	ENST00000514402	INTS5	Q6P9B9	1019 aa	Known RBP	7.57	□□□□□ -1.2
MATR3-223	ENST00000514402	TPTE2	Q6XPS3	522 aa		7.57	□□□□□ -1.2
MATR3-223	ENST00000514402	DYM	Q7RTS9	669 aa		7.57	□□□□□ -1.2
MATR3-223	ENST00000514402	FBLIM1	Q8WUP2	373 aa		7.57	□□□□□ -1.2
MATR3-223	ENST00000514402	GZF1	Q9H116	711 aa	Predicted RBP	7.57	□□□□□ -1.2
MATR3-223	ENST00000514402	ZFP64	Q9NPA5	681 aa		7.57	□□□□□ -1.2
MATR3-223	ENST00000514402	CRIM1	Q9NZV1	1036 aa		7.57	□□□□□ -1.2
MATR3-223	ENST00000514402	PCDHGC5	Q9Y5F6	944 aa		7.57	□□□□□ -1.2
MATR3-223	ENST00000514402	LIG1	P18858	919 aa		7.56	□□□□□ -1.2
MATR3-223	ENST00000514402	GRIK1	P39086	918 aa		7.56	□□□□□ -1.2
MATR3-223	ENST00000514402	ASPA	P45381	313 aa		7.56	□□□□□ -1.2
MATR3-223	ENST00000514402	NFKBIB	Q15653	356 aa		7.56	□□□□□ -1.2
MATR3-223	ENST00000514402	SV2B	Q7L1I2	683 aa		7.56	□□□□□ -1.2
MATR3-223	ENST00000514402	KCNB2	Q92953	911 aa		7.56	□□□□□ -1.2
MATR3-223	ENST00000514402	DUSP9	Q99956	384 aa	Known RBP	7.56	□□□□□ -1.2
MATR3-223	ENST00000514402	METTL22	Q9BUU2	404 aa	Predicted RBP	7.56	□□□□□ -1.2
MATR3-223	ENST00000514402	FAM105A	Q9NUU6	356 aa		7.56	□□□□□ -1.2
MATR3-223	ENST00000514402	COBL	O75128	1261 aa		7.55	□□□□□ -1.2
MATR3-223	ENST00000514402	TRIM37	O94972	964 aa		7.55	□□□□□ -1.2
MATR3-223	ENST00000514402	CD97	P48960	835 aa		7.55	□□□□□ -1.2
MATR3-223	ENST00000514402	SHKBP1	Q8TBC3	707 aa		7.55	□□□□□ -1.2
MATR3-223	ENST00000514402	SEMA6C	Q9H3T2	930 aa		7.55	□□□□□ -1.2
MATR3-223	ENST00000514402	PPP1R9A	Q9ULJ8	1098 aa		7.55	□□□□□ -1.2
MATR3-223	ENST00000514402	CYP8B1	Q9UNU6	501 aa		7.55	□□□□□ -1.2
MATR3-223	ENST00000514402	BMP6	P22004	513 aa		7.54	□□□□□ -1.2
MATR3-223	ENST00000514402	DAB2	P98082	770 aa		7.54	□□□□□ -1.2
MATR3-223	ENST00000514402	FBXO33	Q7Z6M2	555 aa		7.54	□□□□□ -1.2
MATR3-223	ENST00000514402	STK35	Q8TDR2	534 aa		7.54	□□□□□ -1.2
MATR3-223	ENST00000514402	WDR89	Q96FK6	387 aa	Predicted RBP	7.54	□□□□□ -1.2
MATR3-223	ENST00000514402	FANCD2OS	Q96PS1	177 aa		7.54	□□□□□ -1.2
MATR3-223	ENST00000514402	KRTAP4-8	Q9BYQ9	185 aa		7.54	□□□□□ -1.2
MATR3-223	ENST00000514402	ZC3H12C	Q9C0D7	883 aa	Known RBP	7.54	□□□□□ -1.2
MATR3-223	ENST00000514402	ATG3	Q9NT62	314 aa		7.54	□□□□□ -1.2
MATR3-223	ENST00000514402	PRKAG2	Q9UGJ0	569 aa		7.54	□□□□□ -1.2
MATR3-223	ENST00000514402	TTF2	Q9UNY4	1162 aa	Known RBP	7.54	□□□□□ -1.2
MATR3-223	ENST00000514402	PRR19	A6NJB7	356 aa		7.53	□□□□□ -1.2
MATR3-223	ENST00000514402	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	7.53	□□□□□ -1.2
MATR3-223	ENST00000514402	HYAL3	O43820	417 aa	Predicted RBP	7.53	□□□□□ -1.2
MATR3-223	ENST00000514402	TGFB1	P01137	390 aa		7.53	□□□□□ -1.2
MATR3-223	ENST00000514402	RAB6A	P20340	208 aa		7.53	□□□□□ -1.2
MATR3-223	ENST00000514402	ERVK-24	P63145	666 aa		7.53	□□□□□ -1.2
MATR3-223	ENST00000514402	CYP27A1	Q02318	531 aa		7.53	□□□□□ -1.2
MATR3-223	ENST00000514402	MAP1S	Q66K74	1059 aa	Predicted RBP	7.53	□□□□□ -1.2
MATR3-223	ENST00000514402	LLGL2	Q6P1M3	1020 aa		7.53	□□□□□ -1.2
MATR3-223	ENST00000514402	TMC4	Q7Z404	712 aa		7.53	□□□□□ -1.2
MATR3-223	ENST00000514402	ZAR1	Q86SH2	424 aa		7.53	□□□□□ -1.2
MATR3-223	ENST00000514402	MFSD14A	Q96MC6	490 aa		7.53	□□□□□ -1.2
MATR3-223	ENST00000514402	PIDD1	Q9HB75	910 aa		7.53	□□□□□ -1.2
MATR3-223	ENST00000514402	CBX8	Q9HC52	389 aa		7.53	□□□□□ -1.2
MATR3-223	ENST00000514402	PARP2	Q9UGN5	583 aa		7.53	□□□□□ -1.2
MATR3-223	ENST00000514402	WDR64	B1ANS9	1081 aa		7.52	□□□□□ -1.21
MATR3-223	ENST00000514402	NFIC	P08651	508 aa		7.52	□□□□□ -1.21
MATR3-223	ENST00000514402	RPS26	P62854	115 aa	Known RBP	7.52	□□□□□ -1.21
MATR3-223	ENST00000514402	XPC	Q01831	940 aa	Predicted RBP	7.52	□□□□□ -1.21
MATR3-223	ENST00000514402	ZC3H12A	Q5D1E8	599 aa	Known RBP	7.52	□□□□□ -1.21
MATR3-223	ENST00000514402	SEZ6L2	Q6UXD5	910 aa		7.52	□□□□□ -1.21
MATR3-223	ENST00000514402	GPBAR1	Q8TDU6	330 aa		7.52	□□□□□ -1.21
MATR3-223	ENST00000514402	TBC1D32	Q96NH3	1257 aa		7.52	□□□□□ -1.21
MATR3-223	ENST00000514402	OSBPL1A	Q9BXW6	950 aa		7.52	□□□□□ -1.21
MATR3-223	ENST00000514402	ZBTB7C	A1YPR0	619 aa		7.51	□□□□□ -1.21
MATR3-223	ENST00000514402	FBXO24	O75426	580 aa		7.51	□□□□□ -1.21
MATR3-223	ENST00000514402	PAGE1	O75459	146 aa		7.51	□□□□□ -1.21
MATR3-223	ENST00000514402	F13B	P05160	661 aa		7.51	□□□□□ -1.21
MATR3-223	ENST00000514402	ST13	P50502	369 aa	Known RBP	7.51	□□□□□ -1.21
MATR3-223	ENST00000514402	PSMD2	Q13200	908 aa		7.51	□□□□□ -1.21
MATR3-223	ENST00000514402	PCNX4	Q63HM2	1172 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms