RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 GDNFP39905 211 aa4.48□□□□□ -1.69
SMARCAD1-208ENST00000514232 TCERG1LQ5VWI1 586 aa4.48□□□□□ -1.69
SMARCAD1-208ENST00000514232 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
SMARCAD1-208ENST00000514232 BSNDQ8WZ55 320 aa4.48□□□□□ -1.69
SMARCAD1-208ENST00000514232 SEMA3GQ9NS98 782 aa4.48□□□□□ -1.69
SMARCAD1-208ENST00000514232 LEFTY1O75610 366 aa4.47□□□□□ -1.69
SMARCAD1-208ENST00000514232 ESRRAP11474 423 aaPredicted RBP4.47□□□□□ -1.69
SMARCAD1-208ENST00000514232 FAM26DQ5JW98 314 aa4.47□□□□□ -1.69
SMARCAD1-208ENST00000514232 ERICH6BQ5W0A0 696 aa4.47□□□□□ -1.69
SMARCAD1-208ENST00000514232 TMEM102Q8N9M5 508 aaPredicted RBP4.47□□□□□ -1.69
SMARCAD1-208ENST00000514232 SLC16A11Q8NCK7 471 aa4.47□□□□□ -1.69
SMARCAD1-208ENST00000514232 SORCS2Q96PQ0 1159 aa4.47□□□□□ -1.69
SMARCAD1-208ENST00000514232 HINFPQ9BQA5 517 aa4.47□□□□□ -1.69
SMARCAD1-208ENST00000514232 KANSL3Q9P2N6 904 aa4.47□□□□□ -1.69
SMARCAD1-208ENST00000514232 AKAP4Q5JQC9 854 aa4.46□□□□□ -1.7
SMARCAD1-208ENST00000514232 COX20Q5RI15 118 aa4.46□□□□□ -1.7
SMARCAD1-208ENST00000514232 AP4E1Q9UPM8 1137 aa4.46□□□□□ -1.7
SMARCAD1-208ENST00000514232 A6NJR5 290 aa4.45□□□□□ -1.7
SMARCAD1-208ENST00000514232 ITIH2P19823 946 aa4.45□□□□□ -1.7
SMARCAD1-208ENST00000514232 WEE1P30291 646 aa4.45□□□□□ -1.7
SMARCAD1-208ENST00000514232 GSTM4Q03013 218 aa4.45□□□□□ -1.7
SMARCAD1-208ENST00000514232 SPACA3Q8IXA5 215 aa4.45□□□□□ -1.7
SMARCAD1-208ENST00000514232 NXPE3Q969Y0 559 aa4.45□□□□□ -1.7
SMARCAD1-208ENST00000514232 SRRDQ9UH36 339 aa4.45□□□□□ -1.7
SMARCAD1-208ENST00000514232 HHIPL2Q6UWX4 724 aa4.44□□□□□ -1.7
SMARCAD1-208ENST00000514232 DUSP23Q9BVJ7 150 aa4.44□□□□□ -1.7
SMARCAD1-208ENST00000514232 CNTN3Q9P232 1028 aa4.44□□□□□ -1.7
SMARCAD1-208ENST00000514232 SASH1O94885 1247 aa4.43□□□□□ -1.7
SMARCAD1-208ENST00000514232 MAOBP27338 520 aa4.43□□□□□ -1.7
SMARCAD1-208ENST00000514232 DLG4P78352 724 aa4.43□□□□□ -1.7
SMARCAD1-208ENST00000514232 ARHGAP27Q6ZUM4 889 aa4.43□□□□□ -1.7
SMARCAD1-208ENST00000514232 FAM214BQ7L5A3 538 aa4.43□□□□□ -1.7
SMARCAD1-208ENST00000514232 FEZF2Q8TBJ5 459 aa4.43□□□□□ -1.7
SMARCAD1-208ENST00000514232 PIK3R5Q8WYR1 880 aa4.43□□□□□ -1.7
SMARCAD1-208ENST00000514232 HEXIM2Q96MH2 286 aaKnown RBP4.43□□□□□ -1.7
SMARCAD1-208ENST00000514232 UCN2Q96RP3 112 aa4.43□□□□□ -1.7
SMARCAD1-208ENST00000514232 ATP9BO43861 1147 aa4.42□□□□□ -1.7
SMARCAD1-208ENST00000514232 TEPSINQ96N21 525 aa4.42□□□□□ -1.7
SMARCAD1-208ENST00000514232 GPR20Q99678 358 aa4.42□□□□□ -1.7
SMARCAD1-208ENST00000514232 MCOLN1Q9GZU1 580 aa4.42□□□□□ -1.7
SMARCAD1-208ENST00000514232 TMEM63CQ9P1W3 806 aa4.42□□□□□ -1.7
SMARCAD1-208ENST00000514232 FNDC3AQ9Y2H6 1198 aaKnown RBP4.42□□□□□ -1.7
SMARCAD1-208ENST00000514232 MATN3O15232 486 aa4.41□□□□□ -1.7
SMARCAD1-208ENST00000514232 NKPD1Q17RQ9 610 aa4.41□□□□□ -1.7
SMARCAD1-208ENST00000514232 CARS2Q9HA77 564 aaKnown RBP4.41□□□□□ -1.7
SMARCAD1-208ENST00000514232 PPP1R9AQ9ULJ8 1098 aa4.41□□□□□ -1.7
SMARCAD1-208ENST00000514232 SYNGAP1Q96PV0 1343 aa4.41□□□□□ -1.7
SMARCAD1-208ENST00000514232 EIF4EBP3O60516 100 aaPredicted RBP4.4□□□□□ -1.71
SMARCAD1-208ENST00000514232 HMGA2P52926 109 aa4.4□□□□□ -1.71
SMARCAD1-208ENST00000514232 ZNF385BQ569K4 471 aa4.4□□□□□ -1.71
SMARCAD1-208ENST00000514232 VTI1AQ96AJ9 217 aa4.4□□□□□ -1.71
SMARCAD1-208ENST00000514232 ELP3Q9H9T3 547 aa4.4□□□□□ -1.71
SMARCAD1-208ENST00000514232 CNOT6Q9ULM6 557 aaKnown RBP4.4□□□□□ -1.71
SMARCAD1-208ENST00000514232 KCTD3Q9Y597 815 aa4.4□□□□□ -1.71
SMARCAD1-208ENST00000514232 MYOCOSA0A1B0GUC4 107 aa4.39□□□□□ -1.71
SMARCAD1-208ENST00000514232 ECEL1O95672 775 aa4.39□□□□□ -1.71
SMARCAD1-208ENST00000514232 TGM1P22735 817 aa4.39□□□□□ -1.71
SMARCAD1-208ENST00000514232 HNRNPA0Q13151 305 aaKnown RBP4.39□□□□□ -1.71
SMARCAD1-208ENST00000514232 HP1BP3Q5SSJ5 553 aaPredicted RBP4.39□□□□□ -1.71
SMARCAD1-208ENST00000514232 TMEM151BQ8IW70 566 aa4.39□□□□□ -1.71
SMARCAD1-208ENST00000514232 ABHD4Q8TB40 342 aa4.39□□□□□ -1.71
SMARCAD1-208ENST00000514232 ADAMTS19Q8TE59 1207 aa4.39□□□□□ -1.71
SMARCAD1-208ENST00000514232 POM121Q96HA1 1249 aa4.39□□□□□ -1.71
SMARCAD1-208ENST00000514232 ADAM7Q9H2U9 754 aa4.39□□□□□ -1.71
SMARCAD1-208ENST00000514232 SLITRK6Q9H5Y7 841 aa4.39□□□□□ -1.71
SMARCAD1-208ENST00000514232 GCM1Q9NP62 436 aa4.39□□□□□ -1.71
SMARCAD1-208ENST00000514232 RAD18Q9NS91 495 aa4.39□□□□□ -1.71
SMARCAD1-208ENST00000514232 AOC2O75106 756 aa4.38□□□□□ -1.71
SMARCAD1-208ENST00000514232 FSHBP01225 129 aa4.38□□□□□ -1.71
SMARCAD1-208ENST00000514232 BRD2P25440 801 aaKnown RBP4.38□□□□□ -1.71
SMARCAD1-208ENST00000514232 PLP2Q04941 152 aa4.38□□□□□ -1.71
SMARCAD1-208ENST00000514232 MCM6Q14566 821 aa4.38□□□□□ -1.71
SMARCAD1-208ENST00000514232 POU4F3Q15319 338 aa4.38□□□□□ -1.71
SMARCAD1-208ENST00000514232 PDE12Q6L8Q7 609 aaKnown RBP4.38□□□□□ -1.71
SMARCAD1-208ENST00000514232 C1orf127Q8N9H9 656 aa4.38□□□□□ -1.71
SMARCAD1-208ENST00000514232 ZKSCAN3Q9BRR0 538 aa4.38□□□□□ -1.71
SMARCAD1-208ENST00000514232 WDR18Q9BV38 432 aa4.38□□□□□ -1.71
SMARCAD1-208ENST00000514232 BHLHE41Q9C0J9 482 aaPredicted RBP4.38□□□□□ -1.71
SMARCAD1-208ENST00000514232 FAM13BQ9NYF5 915 aa4.38□□□□□ -1.71
SMARCAD1-208ENST00000514232 TNFRSF10BO14763 440 aa4.37□□□□□ -1.71
SMARCAD1-208ENST00000514232 GRIN3BO60391 1043 aa4.37□□□□□ -1.71
SMARCAD1-208ENST00000514232 SEMA7AO75326 666 aa4.37□□□□□ -1.71
SMARCAD1-208ENST00000514232 CLCN7P51798 805 aa4.37□□□□□ -1.71
SMARCAD1-208ENST00000514232 DPYDQ12882 1025 aa4.37□□□□□ -1.71
SMARCAD1-208ENST00000514232 SSPNQ14714 243 aa4.37□□□□□ -1.71
SMARCAD1-208ENST00000514232 ZDHHC14Q8IZN3 488 aa4.37□□□□□ -1.71
SMARCAD1-208ENST00000514232 OSMRQ99650 979 aa4.37□□□□□ -1.71
SMARCAD1-208ENST00000514232 TRIM56Q9BRZ2 755 aaKnown RBP4.37□□□□□ -1.71
SMARCAD1-208ENST00000514232 SCAND2PQ9GZW5 306 aaPredicted RBP4.37□□□□□ -1.71
SMARCAD1-208ENST00000514232 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMARCAD1-208ENST00000514232 COG6Q9Y2V7 657 aa4.37□□□□□ -1.71
SMARCAD1-208ENST00000514232 ZC3H12DA2A288 527 aaKnown RBP4.36□□□□□ -1.71
SMARCAD1-208ENST00000514232 IGF2BP3O00425 579 aaKnown RBP eCLIP4.36□□□□□ -1.71
SMARCAD1-208ENST00000514232 TMPRSS2O15393 492 aa4.36□□□□□ -1.71
SMARCAD1-208ENST00000514232 SLPIP03973 132 aa4.36□□□□□ -1.71
SMARCAD1-208ENST00000514232 CYP11A1P05108 521 aa4.36□□□□□ -1.71
SMARCAD1-208ENST00000514232 PTK7Q13308 1070 aa4.36□□□□□ -1.71
SMARCAD1-208ENST00000514232 SWI5Q1ZZU3 235 aa4.36□□□□□ -1.71
SMARCAD1-208ENST00000514232 CRB2Q5IJ48 1285 aa4.36□□□□□ -1.71
SMARCAD1-208ENST00000514232 BDH2Q9BUT1 245 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms